EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000000694 (Gene tree)
Gene ID: 100730968
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 13509 bases
Position: chrDS562857.1:25387573-25401081
Accession: 100730968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000616	TRM13	PF05206.14	4.4e-93	1	1
ENSCPOP00000000616	zf-U11-48K	PF05253.12	2.4e-09	1	1
ENSCPOP00000000616	zf-TRM13_CCCH	PF11722.8	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000000699	TRMT13-201	1560	XM_003478962	ENSCPOP00000000616	478 (aa)	XP_003479010	H0UUH4

Gene Model

Click here to download ENSCPOG00000000694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000000694	TRMT13	100	89.189	ENSG00000122435	TRMT13	100	89.189	Homo_sapiens
ENSCPOG00000000694	TRMT13	96	48.795	ENSAPOG00000015131	trmt13	99	48.394	Acanthochromis_polyacanthus
ENSCPOG00000000694	TRMT13	100	87.110	ENSAMEG00000008917	TRMT13	100	87.110	Ailuropoda_melanoleuca
ENSCPOG00000000694	TRMT13	98	50.625	ENSACIG00000005804	trmt13	97	49.686	Amphilophus_citrinellus
ENSCPOG00000000694	TRMT13	96	49.398	ENSAOCG00000023585	trmt13	99	49.398	Amphiprion_ocellaris
ENSCPOG00000000694	TRMT13	96	48.708	ENSAPEG00000004025	trmt13	99	48.708	Amphiprion_percula
ENSCPOG00000000694	TRMT13	99	51.527	ENSATEG00000006597	trmt13	99	51.527	Anabas_testudineus
ENSCPOG00000000694	TRMT13	88	66.822	ENSAPLG00000014924	TRMT13	99	66.822	Anas_platyrhynchos
ENSCPOG00000000694	TRMT13	96	63.774	ENSACAG00000003498	TRMT13	98	63.774	Anolis_carolinensis
ENSCPOG00000000694	TRMT13	100	89.397	ENSANAG00000019525	TRMT13	100	89.397	Aotus_nancymaae
ENSCPOG00000000694	TRMT13	97	52.966	ENSACLG00000020018	trmt13	100	52.966	Astatotilapia_calliptera
ENSCPOG00000000694	TRMT13	96	54.025	ENSAMXG00000017963	trmt13	98	54.873	Astyanax_mexicanus
ENSCPOG00000000694	TRMT13	100	86.486	ENSBTAG00000015781	TRMT13	100	86.486	Bos_taurus
ENSCPOG00000000694	TRMT13	100	88.981	ENSCJAG00000000200	TRMT13	100	88.981	Callithrix_jacchus
ENSCPOG00000000694	TRMT13	65	88.535	ENSCAFG00000020021	TRMT13	99	88.535	Canis_familiaris
ENSCPOG00000000694	TRMT13	57	91.941	ENSCAFG00020011572	TRMT13	95	91.273	Canis_lupus_dingo
ENSCPOG00000000694	TRMT13	100	86.694	ENSCHIG00000015395	TRMT13	100	86.694	Capra_hircus
ENSCPOG00000000694	TRMT13	98	79.493	ENSTSYG00000010811	TRMT13	98	85.859	Carlito_syrichta
ENSCPOG00000000694	TRMT13	75	76.389	ENSCAPG00000009085	TRMT13	100	76.796	Cavia_aperea
ENSCPOG00000000694	TRMT13	100	89.397	ENSCCAG00000023772	TRMT13	100	89.397	Cebus_capucinus
ENSCPOG00000000694	TRMT13	100	89.189	ENSCATG00000033556	TRMT13	100	89.189	Cercocebus_atys
ENSCPOG00000000694	TRMT13	89	88.208	ENSCLAG00000008220	TRMT13	100	88.525	Chinchilla_lanigera
ENSCPOG00000000694	TRMT13	100	89.189	ENSCSAG00000001506	TRMT13	100	89.189	Chlorocebus_sabaeus
ENSCPOG00000000694	TRMT13	100	68.750	ENSCPBG00000026671	TRMT13	100	68.750	Chrysemys_picta_bellii
ENSCPOG00000000694	TRMT13	100	89.397	ENSCANG00000034659	TRMT13	100	89.397	Colobus_angolensis_palliatus
ENSCPOG00000000694	TRMT13	99	84.407	ENSCGRG00001021601	Trmt13	99	84.407	Cricetulus_griseus_chok1gshd
ENSCPOG00000000694	TRMT13	53	81.323	ENSCGRG00000000093	-	99	81.323	Cricetulus_griseus_crigri
ENSCPOG00000000694	TRMT13	96	48.696	ENSCSEG00000000591	trmt13	97	48.899	Cynoglossus_semilaevis
ENSCPOG00000000694	TRMT13	96	49.370	ENSCVAG00000017342	trmt13	94	50.630	Cyprinodon_variegatus
ENSCPOG00000000694	TRMT13	95	57.701	ENSDARG00000102846	trmt13	96	57.701	Danio_rerio
ENSCPOG00000000694	TRMT13	57	89.493	ENSDNOG00000001710	TRMT13	84	89.493	Dasypus_novemcinctus
ENSCPOG00000000694	TRMT13	99	87.500	ENSDORG00000015808	Trmt13	99	87.500	Dipodomys_ordii
ENSCPOG00000000694	TRMT13	97	31.546	FBgn0037435	CG18048	96	31.546	Drosophila_melanogaster
ENSCPOG00000000694	TRMT13	99	74.322	ENSETEG00000005819	TRMT13	99	74.322	Echinops_telfairi
ENSCPOG00000000694	TRMT13	94	46.421	ENSEBUG00000014444	trmt13	96	46.421	Eptatretus_burgeri
ENSCPOG00000000694	TRMT13	100	90.229	ENSEASG00005015918	TRMT13	100	90.229	Equus_asinus_asinus
ENSCPOG00000000694	TRMT13	100	89.813	ENSECAG00000022626	TRMT13	100	89.813	Equus_caballus
ENSCPOG00000000694	TRMT13	79	79.430	ENSEEUG00000000294	TRMT13	80	79.430	Erinaceus_europaeus
ENSCPOG00000000694	TRMT13	98	55.324	ENSELUG00000003803	trmt13	99	56.263	Esox_lucius
ENSCPOG00000000694	TRMT13	100	88.773	ENSFCAG00000030618	TRMT13	100	91.743	Felis_catus
ENSCPOG00000000694	TRMT13	99	63.866	ENSFALG00000002424	TRMT13	99	63.866	Ficedula_albicollis
ENSCPOG00000000694	TRMT13	99	94.316	ENSFDAG00000006342	TRMT13	98	94.316	Fukomys_damarensis
ENSCPOG00000000694	TRMT13	79	52.284	ENSFHEG00000022954	trmt13	98	51.485	Fundulus_heteroclitus
ENSCPOG00000000694	TRMT13	95	49.336	ENSGMOG00000013223	trmt13	100	49.779	Gadus_morhua
ENSCPOG00000000694	TRMT13	96	65.032	ENSGALG00000005290	TRMT13	96	65.944	Gallus_gallus
ENSCPOG00000000694	TRMT13	76	51.323	ENSGAFG00000001577	trmt13	81	51.323	Gambusia_affinis
ENSCPOG00000000694	TRMT13	95	51.082	ENSGACG00000013428	trmt13	97	51.732	Gasterosteus_aculeatus
ENSCPOG00000000694	TRMT13	100	69.647	ENSGAGG00000023303	TRMT13	99	73.455	Gopherus_agassizii
ENSCPOG00000000694	TRMT13	100	88.981	ENSGGOG00000005616	TRMT13	100	88.981	Gorilla_gorilla
ENSCPOG00000000694	TRMT13	97	53.390	ENSHBUG00000007754	trmt13	100	53.390	Haplochromis_burtoni
ENSCPOG00000000694	TRMT13	99	94.526	ENSHGLG00000002164	TRMT13	98	94.526	Heterocephalus_glaber_female
ENSCPOG00000000694	TRMT13	99	94.526	ENSHGLG00100001618	TRMT13	98	94.526	Heterocephalus_glaber_male
ENSCPOG00000000694	TRMT13	96	47.516	ENSHCOG00000020553	trmt13	98	47.516	Hippocampus_comes
ENSCPOG00000000694	TRMT13	96	57.050	ENSIPUG00000024787	trmt13	98	58.065	Ictalurus_punctatus
ENSCPOG00000000694	TRMT13	100	91.684	ENSSTOG00000013483	TRMT13	100	91.684	Ictidomys_tridecemlineatus
ENSCPOG00000000694	TRMT13	99	86.250	ENSJJAG00000018012	Trmt13	99	86.250	Jaculus_jaculus
ENSCPOG00000000694	TRMT13	63	50.331	ENSKMAG00000007639	trmt13	92	50.331	Kryptolebias_marmoratus
ENSCPOG00000000694	TRMT13	95	50.959	ENSLBEG00000020238	trmt13	99	50.740	Labrus_bergylta
ENSCPOG00000000694	TRMT13	95	62.963	ENSLACG00000013153	TRMT13	99	61.713	Latimeria_chalumnae
ENSCPOG00000000694	TRMT13	96	58.747	ENSLOCG00000000418	trmt13	98	58.785	Lepisosteus_oculatus
ENSCPOG00000000694	TRMT13	77	84.054	ENSLAFG00000002383	TRMT13	100	84.054	Loxodonta_africana
ENSCPOG00000000694	TRMT13	100	88.981	ENSMFAG00000034681	TRMT13	100	88.991	Macaca_fascicularis
ENSCPOG00000000694	TRMT13	100	88.981	ENSMMUG00000004243	TRMT13	100	88.991	Macaca_mulatta
ENSCPOG00000000694	TRMT13	100	88.981	ENSMNEG00000036102	TRMT13	100	88.991	Macaca_nemestrina
ENSCPOG00000000694	TRMT13	100	89.605	ENSMLEG00000034258	TRMT13	100	89.908	Mandrillus_leucophaeus
ENSCPOG00000000694	TRMT13	96	51.163	ENSMAMG00000016597	trmt13	98	51.163	Mastacembelus_armatus
ENSCPOG00000000694	TRMT13	97	52.754	ENSMZEG00005020959	trmt13	100	52.754	Maylandia_zebra
ENSCPOG00000000694	TRMT13	90	66.589	ENSMGAG00000006970	TRMT13	100	66.589	Meleagris_gallopavo
ENSCPOG00000000694	TRMT13	99	83.958	ENSMAUG00000010448	Trmt13	99	83.958	Mesocricetus_auratus
ENSCPOG00000000694	TRMT13	100	91.268	ENSMICG00000005283	TRMT13	100	95.413	Microcebus_murinus
ENSCPOG00000000694	TRMT13	99	81.042	ENSMOCG00000019914	Trmt13	99	81.042	Microtus_ochrogaster
ENSCPOG00000000694	TRMT13	54	50.566	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSCPOG00000000694	TRMT13	100	74.691	ENSMODG00000003646	TRMT13	100	74.691	Monodelphis_domestica
ENSCPOG00000000694	TRMT13	99	49.688	ENSMALG00000020965	trmt13	99	49.688	Monopterus_albus
ENSCPOG00000000694	TRMT13	99	85.774	MGP_CAROLIEiJ_G0025568	Trmt13	99	85.774	Mus_caroli
ENSCPOG00000000694	TRMT13	99	84.937	ENSMUSG00000033439	Trmt13	94	90.476	Mus_musculus
ENSCPOG00000000694	TRMT13	99	85.774	MGP_PahariEiJ_G0027014	Trmt13	99	85.774	Mus_pahari
ENSCPOG00000000694	TRMT13	99	84.937	MGP_SPRETEiJ_G0026518	Trmt13	94	90.476	Mus_spretus
ENSCPOG00000000694	TRMT13	79	86.352	ENSMPUG00000002078	-	100	86.352	Mustela_putorius_furo
ENSCPOG00000000694	TRMT13	100	78.333	ENSMLUG00000002124	TRMT13	100	78.333	Myotis_lucifugus
ENSCPOG00000000694	TRMT13	97	48.305	ENSNBRG00000006783	trmt13	97	50.108	Neolamprologus_brichardi
ENSCPOG00000000694	TRMT13	100	88.981	ENSNLEG00000035917	TRMT13	100	88.991	Nomascus_leucogenys
ENSCPOG00000000694	TRMT13	52	73.387	ENSMEUG00000013346	-	100	73.387	Notamacropus_eugenii
ENSCPOG00000000694	TRMT13	67	91.176	ENSOPRG00000012048	TRMT13	67	91.176	Ochotona_princeps
ENSCPOG00000000694	TRMT13	97	53.178	ENSONIG00000004574	trmt13	100	53.178	Oreochromis_niloticus
ENSCPOG00000000694	TRMT13	89	72.158	ENSOANG00000012057	TRMT13	99	72.158	Ornithorhynchus_anatinus
ENSCPOG00000000694	TRMT13	99	89.353	ENSOCUG00000023095	TRMT13	99	89.353	Oryctolagus_cuniculus
ENSCPOG00000000694	TRMT13	96	47.854	ENSORLG00000003320	trmt13	98	48.498	Oryzias_latipes
ENSCPOG00000000694	TRMT13	97	48.734	ENSORLG00020005972	trmt13	98	48.945	Oryzias_latipes_hni
ENSCPOG00000000694	TRMT13	96	52.146	ENSORLG00015002270	trmt13	98	52.146	Oryzias_latipes_hsok
ENSCPOG00000000694	TRMT13	96	52.043	ENSOMEG00000006724	trmt13	94	52.688	Oryzias_melastigma
ENSCPOG00000000694	TRMT13	98	91.332	ENSOGAG00000005618	TRMT13	97	90.644	Otolemur_garnettii
ENSCPOG00000000694	TRMT13	100	86.694	ENSOARG00000017983	TRMT13	100	86.694	Ovis_aries
ENSCPOG00000000694	TRMT13	100	89.189	ENSPPAG00000043736	TRMT13	100	89.189	Pan_paniscus
ENSCPOG00000000694	TRMT13	100	88.981	ENSPPRG00000003424	TRMT13	100	91.743	Panthera_pardus
ENSCPOG00000000694	TRMT13	100	88.981	ENSPTIG00000018598	TRMT13	100	91.743	Panthera_tigris_altaica
ENSCPOG00000000694	TRMT13	100	89.189	ENSPTRG00000001001	TRMT13	100	89.189	Pan_troglodytes
ENSCPOG00000000694	TRMT13	100	89.397	ENSPANG00000007598	TRMT13	100	89.448	Papio_anubis
ENSCPOG00000000694	TRMT13	95	56.236	ENSPKIG00000001514	trmt13	97	56.236	Paramormyrops_kingsleyae
ENSCPOG00000000694	TRMT13	86	69.952	ENSPSIG00000012703	TRMT13	99	69.952	Pelodiscus_sinensis
ENSCPOG00000000694	TRMT13	98	50.531	ENSPMGG00000013298	trmt13	93	50.531	Periophthalmus_magnuspinnatus
ENSCPOG00000000694	TRMT13	99	82.500	ENSPEMG00000000275	Trmt13	99	82.500	Peromyscus_maniculatus_bairdii
ENSCPOG00000000694	TRMT13	95	45.493	ENSPMAG00000000823	trmt13	100	44.969	Petromyzon_marinus
ENSCPOG00000000694	TRMT13	99	75.569	ENSPCIG00000007699	TRMT13	99	76.190	Phascolarctos_cinereus
ENSCPOG00000000694	TRMT13	97	50.000	ENSPFOG00000008675	trmt13	96	50.000	Poecilia_formosa
ENSCPOG00000000694	TRMT13	96	49.260	ENSPLAG00000009709	trmt13	99	49.260	Poecilia_latipinna
ENSCPOG00000000694	TRMT13	96	48.203	ENSPMEG00000022954	trmt13	99	48.203	Poecilia_mexicana
ENSCPOG00000000694	TRMT13	82	48.762	ENSPREG00000005645	trmt13	92	49.822	Poecilia_reticulata
ENSCPOG00000000694	TRMT13	100	88.773	ENSPPYG00000001120	TRMT13	100	88.773	Pongo_abelii
ENSCPOG00000000694	TRMT13	99	86.013	ENSPCAG00000002340	TRMT13	99	86.013	Procavia_capensis
ENSCPOG00000000694	TRMT13	100	90.644	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSCPOG00000000694	TRMT13	100	89.397	ENSPVAG00000017430	TRMT13	100	89.397	Pteropus_vampyrus
ENSCPOG00000000694	TRMT13	97	51.483	ENSPNYG00000013690	trmt13	100	51.483	Pundamilia_nyererei
ENSCPOG00000000694	TRMT13	96	55.484	ENSPNAG00000022130	trmt13	98	55.484	Pygocentrus_nattereri
ENSCPOG00000000694	TRMT13	99	84.937	ENSRNOG00000015140	Trmt13	96	84.937	Rattus_norvegicus
ENSCPOG00000000694	TRMT13	100	89.397	ENSRBIG00000037686	TRMT13	100	89.397	Rhinopithecus_bieti
ENSCPOG00000000694	TRMT13	100	89.397	ENSRROG00000044057	TRMT13	100	89.397	Rhinopithecus_roxellana
ENSCPOG00000000694	TRMT13	100	89.397	ENSSBOG00000026541	TRMT13	100	89.397	Saimiri_boliviensis_boliviensis
ENSCPOG00000000694	TRMT13	91	76.659	ENSSHAG00000005213	TRMT13	97	76.659	Sarcophilus_harrisii
ENSCPOG00000000694	TRMT13	96	55.054	ENSSFOG00015017560	trmt13	97	55.628	Scleropages_formosus
ENSCPOG00000000694	TRMT13	98	50.208	ENSSMAG00000014592	trmt13	97	50.417	Scophthalmus_maximus
ENSCPOG00000000694	TRMT13	98	50.308	ENSSDUG00000015508	trmt13	98	50.305	Seriola_dumerili
ENSCPOG00000000694	TRMT13	96	51.046	ENSSLDG00000019060	trmt13	98	50.924	Seriola_lalandi_dorsalis
ENSCPOG00000000694	TRMT13	99	75.732	ENSSARG00000010344	TRMT13	99	75.732	Sorex_araneus
ENSCPOG00000000694	TRMT13	96	68.182	ENSSPUG00000016339	TRMT13	100	68.182	Sphenodon_punctatus
ENSCPOG00000000694	TRMT13	98	51.055	ENSSPAG00000011922	trmt13	99	51.046	Stegastes_partitus
ENSCPOG00000000694	TRMT13	100	88.150	ENSSSCG00000006869	TRMT13	100	88.150	Sus_scrofa
ENSCPOG00000000694	TRMT13	97	65.451	ENSTGUG00000005253	TRMT13	100	65.451	Taeniopygia_guttata
ENSCPOG00000000694	TRMT13	95	49.573	ENSTRUG00000008400	trmt13	99	49.367	Takifugu_rubripes
ENSCPOG00000000694	TRMT13	86	72.289	ENSTBEG00000008911	TRMT13	99	72.289	Tupaia_belangeri
ENSCPOG00000000694	TRMT13	50	97.368	ENSTTRG00000015302	-	60	97.368	Tursiops_truncatus
ENSCPOG00000000694	TRMT13	100	81.913	ENSUAMG00000017251	TRMT13	100	81.913	Ursus_americanus
ENSCPOG00000000694	TRMT13	100	87.318	ENSUMAG00000007901	TRMT13	100	87.318	Ursus_maritimus
ENSCPOG00000000694	TRMT13	90	71.991	ENSVPAG00000001034	TRMT13	100	71.991	Vicugna_pacos
ENSCPOG00000000694	TRMT13	99	88.981	ENSVVUG00000021996	TRMT13	99	88.981	Vulpes_vulpes
ENSCPOG00000000694	TRMT13	98	56.624	ENSXETG00000013204	trmt13	99	56.624	Xenopus_tropicalis
ENSCPOG00000000694	TRMT13	96	48.414	ENSXMAG00000010765	trmt13	99	48.414	Xiphophorus_maculatus