EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000000959 (Gene tree)
Gene ID: 100719711
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 34078 bases
Position: chrDS562869.1:41348888-41382965
Accession: 100719711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000861	efThoc1	PF11957.8	1.2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000000965	THOC1-201	7005	XM_013157155	ENSCPOP00000000861	657 (aa)	XP_013012609	H0UV41

Gene Model

Click here to download ENSCPOG00000000959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000000959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000000959	THOC1	100	95.738	ENSG00000079134	THOC1	99	96.809	Homo_sapiens
ENSCPOG00000000959	THOC1	100	96.347	ENSAMEG00000006645	THOC1	99	96.347	Ailuropoda_melanoleuca
ENSCPOG00000000959	THOC1	93	72.876	ENSACIG00000019392	thoc1	99	68.413	Amphilophus_citrinellus
ENSCPOG00000000959	THOC1	98	68.615	ENSAOCG00000008391	thoc1	99	68.615	Amphiprion_ocellaris
ENSCPOG00000000959	THOC1	98	72.086	ENSAPEG00000001093	thoc1	99	72.086	Amphiprion_percula
ENSCPOG00000000959	THOC1	98	71.889	ENSATEG00000004783	thoc1	99	71.889	Anabas_testudineus
ENSCPOG00000000959	THOC1	98	89.506	ENSAPLG00000016149	THOC1	98	89.506	Anas_platyrhynchos
ENSCPOG00000000959	THOC1	99	88.316	ENSACAG00000008307	THOC1	98	86.798	Anolis_carolinensis
ENSCPOG00000000959	THOC1	100	94.428	ENSANAG00000033200	THOC1	100	94.428	Aotus_nancymaae
ENSCPOG00000000959	THOC1	98	71.626	ENSACLG00000016836	thoc1	99	71.626	Astatotilapia_calliptera
ENSCPOG00000000959	THOC1	93	70.692	ENSAMXG00000014708	thoc1	97	70.692	Astyanax_mexicanus
ENSCPOG00000000959	THOC1	100	95.434	ENSBTAG00000019215	THOC1	100	95.434	Bos_taurus
ENSCPOG00000000959	THOC1	71	35.208	WBGene00020172	thoc-1	69	36.093	Caenorhabditis_elegans
ENSCPOG00000000959	THOC1	100	95.586	ENSCJAG00000020450	THOC1	100	95.586	Callithrix_jacchus
ENSCPOG00000000959	THOC1	100	96.195	ENSCAFG00000018324	THOC1	100	96.195	Canis_familiaris
ENSCPOG00000000959	THOC1	100	96.195	ENSCAFG00020017894	THOC1	100	96.195	Canis_lupus_dingo
ENSCPOG00000000959	THOC1	100	95.434	ENSCHIG00000015399	THOC1	100	95.434	Capra_hircus
ENSCPOG00000000959	THOC1	100	96.043	ENSTSYG00000010585	THOC1	99	96.043	Carlito_syrichta
ENSCPOG00000000959	THOC1	97	73.529	ENSCAPG00000016270	THOC1	99	73.118	Cavia_aperea
ENSCPOG00000000959	THOC1	100	95.586	ENSCCAG00000025766	THOC1	100	95.586	Cebus_capucinus
ENSCPOG00000000959	THOC1	100	92.237	ENSCATG00000028180	THOC1	99	95.225	Cercocebus_atys
ENSCPOG00000000959	THOC1	97	98.592	ENSCLAG00000009117	THOC1	100	98.592	Chinchilla_lanigera
ENSCPOG00000000959	THOC1	100	95.738	ENSCSAG00000017631	THOC1	100	95.738	Chlorocebus_sabaeus
ENSCPOG00000000959	THOC1	89	84.532	ENSCHOG00000010609	THOC1	89	84.532	Choloepus_hoffmanni
ENSCPOG00000000959	THOC1	99	91.298	ENSCPBG00000027558	THOC1	99	91.298	Chrysemys_picta_bellii
ENSCPOG00000000959	THOC1	73	48.988	ENSCING00000007663	-	99	48.988	Ciona_intestinalis
ENSCPOG00000000959	THOC1	93	47.771	ENSCSAVG00000010649	-	99	47.068	Ciona_savignyi
ENSCPOG00000000959	THOC1	100	95.586	ENSCANG00000034265	THOC1	100	95.586	Colobus_angolensis_palliatus
ENSCPOG00000000959	THOC1	100	94.521	ENSCGRG00001016464	Thoc1	99	94.521	Cricetulus_griseus_chok1gshd
ENSCPOG00000000959	THOC1	98	94.729	ENSCGRG00000010269	-	100	94.992	Cricetulus_griseus_crigri
ENSCPOG00000000959	THOC1	90	78.209	ENSCGRG00000003390	-	99	78.209	Cricetulus_griseus_crigri
ENSCPOG00000000959	THOC1	98	70.472	ENSCSEG00000012486	thoc1	99	72.026	Cynoglossus_semilaevis
ENSCPOG00000000959	THOC1	98	71.626	ENSCVAG00000020600	thoc1	99	71.626	Cyprinodon_variegatus
ENSCPOG00000000959	THOC1	98	73.579	ENSDARG00000088246	thoc1	99	73.579	Danio_rerio
ENSCPOG00000000959	THOC1	100	95.890	ENSDNOG00000019217	THOC1	100	95.890	Dasypus_novemcinctus
ENSCPOG00000000959	THOC1	99	88.923	ENSDORG00000008060	Thoc1	99	90.610	Dipodomys_ordii
ENSCPOG00000000959	THOC1	92	36.992	FBgn0037382	Hpr1	74	41.316	Drosophila_melanogaster
ENSCPOG00000000959	THOC1	91	75.503	ENSETEG00000004165	THOC1	100	75.503	Echinops_telfairi
ENSCPOG00000000959	THOC1	92	64.784	ENSEBUG00000005998	thoc1	98	66.113	Eptatretus_burgeri
ENSCPOG00000000959	THOC1	100	95.890	ENSEASG00005002549	THOC1	96	95.890	Equus_asinus_asinus
ENSCPOG00000000959	THOC1	100	96.195	ENSECAG00000009267	THOC1	90	96.195	Equus_caballus
ENSCPOG00000000959	THOC1	80	76.500	ENSEEUG00000012214	-	82	76.500	Erinaceus_europaeus
ENSCPOG00000000959	THOC1	99	72.256	ENSELUG00000023277	thoc1	99	72.256	Esox_lucius
ENSCPOG00000000959	THOC1	100	95.738	ENSFCAG00000022454	THOC1	87	95.738	Felis_catus
ENSCPOG00000000959	THOC1	97	90.202	ENSFALG00000006205	THOC1	99	90.202	Ficedula_albicollis
ENSCPOG00000000959	THOC1	98	97.682	ENSFDAG00000006842	THOC1	100	97.682	Fukomys_damarensis
ENSCPOG00000000959	THOC1	98	71.319	ENSFHEG00000008841	thoc1	99	71.319	Fundulus_heteroclitus
ENSCPOG00000000959	THOC1	99	71.908	ENSGMOG00000011486	thoc1	99	71.908	Gadus_morhua
ENSCPOG00000000959	THOC1	99	89.954	ENSGALG00000014915	THOC1	99	89.140	Gallus_gallus
ENSCPOG00000000959	THOC1	98	71.319	ENSGAFG00000021464	thoc1	98	72.408	Gambusia_affinis
ENSCPOG00000000959	THOC1	100	71.299	ENSGACG00000017361	thoc1	96	75.549	Gasterosteus_aculeatus
ENSCPOG00000000959	THOC1	99	90.868	ENSGAGG00000021230	-	98	90.868	Gopherus_agassizii
ENSCPOG00000000959	THOC1	100	95.738	ENSGGOG00000003013	THOC1	99	95.738	Gorilla_gorilla
ENSCPOG00000000959	THOC1	98	71.626	ENSHBUG00000009096	thoc1	99	71.626	Haplochromis_burtoni
ENSCPOG00000000959	THOC1	100	96.956	ENSHGLG00000003712	-	100	96.956	Heterocephalus_glaber_female
ENSCPOG00000000959	THOC1	78	91.192	ENSHGLG00000009264	-	99	91.192	Heterocephalus_glaber_female
ENSCPOG00000000959	THOC1	100	97.412	ENSHGLG00100003570	THOC1	100	97.412	Heterocephalus_glaber_male
ENSCPOG00000000959	THOC1	77	89.637	ENSHGLG00100002225	-	99	89.637	Heterocephalus_glaber_male
ENSCPOG00000000959	THOC1	89	73.624	ENSIPUG00000005306	thoc1	99	73.435	Ictalurus_punctatus
ENSCPOG00000000959	THOC1	100	96.804	ENSSTOG00000006484	THOC1	100	96.804	Ictidomys_tridecemlineatus
ENSCPOG00000000959	THOC1	52	93.235	ENSJJAG00000014893	-	96	93.235	Jaculus_jaculus
ENSCPOG00000000959	THOC1	99	71.233	ENSKMAG00000003904	thoc1	99	71.233	Kryptolebias_marmoratus
ENSCPOG00000000959	THOC1	98	71.933	ENSLBEG00000020372	thoc1	98	71.933	Labrus_bergylta
ENSCPOG00000000959	THOC1	99	80.335	ENSLACG00000014869	THOC1	99	79.389	Latimeria_chalumnae
ENSCPOG00000000959	THOC1	98	76.570	ENSLOCG00000002097	thoc1	99	75.920	Lepisosteus_oculatus
ENSCPOG00000000959	THOC1	100	96.043	ENSLAFG00000009585	THOC1	100	96.043	Loxodonta_africana
ENSCPOG00000000959	THOC1	100	95.738	ENSMFAG00000041520	THOC1	99	95.738	Macaca_fascicularis
ENSCPOG00000000959	THOC1	100	95.738	ENSMMUG00000004662	THOC1	100	95.738	Macaca_mulatta
ENSCPOG00000000959	THOC1	100	95.738	ENSMNEG00000040177	THOC1	99	95.738	Macaca_nemestrina
ENSCPOG00000000959	THOC1	100	95.738	ENSMLEG00000034201	THOC1	99	95.738	Mandrillus_leucophaeus
ENSCPOG00000000959	THOC1	94	72.186	ENSMAMG00000016747	thoc1	99	72.186	Mastacembelus_armatus
ENSCPOG00000000959	THOC1	98	71.626	ENSMZEG00005024609	thoc1	99	71.626	Maylandia_zebra
ENSCPOG00000000959	THOC1	97	90.187	ENSMGAG00000009811	THOC1	100	90.187	Meleagris_gallopavo
ENSCPOG00000000959	THOC1	100	94.673	ENSMAUG00000010272	Thoc1	99	94.673	Mesocricetus_auratus
ENSCPOG00000000959	THOC1	100	96.043	ENSMICG00000027200	THOC1	100	96.043	Microcebus_murinus
ENSCPOG00000000959	THOC1	99	93.140	ENSMOCG00000014536	-	86	93.140	Microtus_ochrogaster
ENSCPOG00000000959	THOC1	99	81.957	ENSMOCG00000014924	-	96	81.957	Microtus_ochrogaster
ENSCPOG00000000959	THOC1	92	72.386	ENSMMOG00000011772	thoc1	100	72.386	Mola_mola
ENSCPOG00000000959	THOC1	100	92.481	ENSMODG00000021482	THOC1	100	92.481	Monodelphis_domestica
ENSCPOG00000000959	THOC1	98	71.889	ENSMALG00000021872	thoc1	99	71.889	Monopterus_albus
ENSCPOG00000000959	THOC1	100	94.673	MGP_CAROLIEiJ_G0021989	Thoc1	100	94.673	Mus_caroli
ENSCPOG00000000959	THOC1	100	94.825	ENSMUSG00000024287	Thoc1	100	96.454	Mus_musculus
ENSCPOG00000000959	THOC1	100	94.825	MGP_PahariEiJ_G0018726	Thoc1	100	94.825	Mus_pahari
ENSCPOG00000000959	THOC1	100	94.673	MGP_SPRETEiJ_G0022905	Thoc1	100	94.673	Mus_spretus
ENSCPOG00000000959	THOC1	100	96.347	ENSMPUG00000005448	THOC1	100	96.347	Mustela_putorius_furo
ENSCPOG00000000959	THOC1	90	83.474	ENSMLUG00000027965	-	99	83.305	Myotis_lucifugus
ENSCPOG00000000959	THOC1	60	83.123	ENSMLUG00000024912	-	100	83.123	Myotis_lucifugus
ENSCPOG00000000959	THOC1	100	95.593	ENSMLUG00000004090	-	100	95.593	Myotis_lucifugus
ENSCPOG00000000959	THOC1	100	95.738	ENSNGAG00000001401	-	100	95.738	Nannospalax_galili
ENSCPOG00000000959	THOC1	99	74.312	ENSNGAG00000008061	-	99	75.270	Nannospalax_galili
ENSCPOG00000000959	THOC1	96	72.397	ENSNBRG00000005991	thoc1	97	72.397	Neolamprologus_brichardi
ENSCPOG00000000959	THOC1	100	95.738	ENSNLEG00000006835	THOC1	100	95.738	Nomascus_leucogenys
ENSCPOG00000000959	THOC1	97	81.534	ENSMEUG00000009756	THOC1	99	81.534	Notamacropus_eugenii
ENSCPOG00000000959	THOC1	100	77.321	ENSOPRG00000001108	THOC1	100	77.321	Ochotona_princeps
ENSCPOG00000000959	THOC1	100	92.998	ENSODEG00000006623	THOC1	100	92.998	Octodon_degus
ENSCPOG00000000959	THOC1	99	71.713	ENSONIG00000009440	thoc1	99	71.104	Oreochromis_niloticus
ENSCPOG00000000959	THOC1	100	96.651	ENSOCUG00000011601	THOC1	100	96.651	Oryctolagus_cuniculus
ENSCPOG00000000959	THOC1	98	71.166	ENSORLG00000017629	thoc1	99	71.166	Oryzias_latipes
ENSCPOG00000000959	THOC1	98	71.166	ENSORLG00020007567	thoc1	99	71.166	Oryzias_latipes_hni
ENSCPOG00000000959	THOC1	98	71.319	ENSORLG00015007356	thoc1	99	71.319	Oryzias_latipes_hsok
ENSCPOG00000000959	THOC1	98	69.785	ENSOMEG00000008200	thoc1	99	70.552	Oryzias_melastigma
ENSCPOG00000000959	THOC1	100	92.846	ENSOGAG00000000470	THOC1	99	92.846	Otolemur_garnettii
ENSCPOG00000000959	THOC1	99	94.495	ENSOARG00000009238	THOC1	99	94.495	Ovis_aries
ENSCPOG00000000959	THOC1	100	95.738	ENSPPAG00000031812	THOC1	99	95.738	Pan_paniscus
ENSCPOG00000000959	THOC1	100	95.434	ENSPPRG00000023794	THOC1	100	95.434	Panthera_pardus
ENSCPOG00000000959	THOC1	100	95.434	ENSPTIG00000007469	THOC1	100	95.434	Panthera_tigris_altaica
ENSCPOG00000000959	THOC1	100	94.880	ENSPTRG00000009816	THOC1	100	94.880	Pan_troglodytes
ENSCPOG00000000959	THOC1	100	94.705	ENSPANG00000008665	THOC1	100	94.705	Papio_anubis
ENSCPOG00000000959	THOC1	99	71.713	ENSPKIG00000005906	thoc1	99	72.477	Paramormyrops_kingsleyae
ENSCPOG00000000959	THOC1	81	93.433	ENSPSIG00000007691	THOC1	98	93.433	Pelodiscus_sinensis
ENSCPOG00000000959	THOC1	93	72.609	ENSPMGG00000008279	thoc1	95	72.609	Periophthalmus_magnuspinnatus
ENSCPOG00000000959	THOC1	100	94.825	ENSPEMG00000021789	Thoc1	100	94.825	Peromyscus_maniculatus_bairdii
ENSCPOG00000000959	THOC1	74	92.915	ENSPCIG00000026942	THOC1	98	92.915	Phascolarctos_cinereus
ENSCPOG00000000959	THOC1	98	71.275	ENSPFOG00000011673	thoc1	99	71.275	Poecilia_formosa
ENSCPOG00000000959	THOC1	98	71.166	ENSPLAG00000019648	thoc1	99	71.166	Poecilia_latipinna
ENSCPOG00000000959	THOC1	98	71.275	ENSPMEG00000007083	thoc1	99	71.275	Poecilia_mexicana
ENSCPOG00000000959	THOC1	98	71.012	ENSPREG00000006719	thoc1	99	71.012	Poecilia_reticulata
ENSCPOG00000000959	THOC1	74	96.099	ENSPPYG00000009049	-	99	96.099	Pongo_abelii
ENSCPOG00000000959	THOC1	100	85.997	ENSPCAG00000005320	THOC1	100	84.932	Procavia_capensis
ENSCPOG00000000959	THOC1	100	95.890	ENSPCOG00000009234	THOC1	100	95.890	Propithecus_coquereli
ENSCPOG00000000959	THOC1	100	94.216	ENSPVAG00000004007	THOC1	100	94.216	Pteropus_vampyrus
ENSCPOG00000000959	THOC1	98	71.626	ENSPNYG00000019152	thoc1	99	71.626	Pundamilia_nyererei
ENSCPOG00000000959	THOC1	98	73.538	ENSPNAG00000023390	thoc1	99	73.538	Pygocentrus_nattereri
ENSCPOG00000000959	THOC1	91	84.766	ENSRNOG00000015332	Thoc1	100	84.766	Rattus_norvegicus
ENSCPOG00000000959	THOC1	100	94.729	ENSRBIG00000033738	THOC1	99	96.696	Rhinopithecus_bieti
ENSCPOG00000000959	THOC1	100	95.738	ENSRROG00000044988	THOC1	100	95.738	Rhinopithecus_roxellana
ENSCPOG00000000959	THOC1	100	95.586	ENSSBOG00000016556	THOC1	99	95.586	Saimiri_boliviensis_boliviensis
ENSCPOG00000000959	THOC1	100	93.313	ENSSHAG00000014829	THOC1	100	93.313	Sarcophilus_harrisii
ENSCPOG00000000959	THOC1	98	74.080	ENSSFOG00015021527	thoc1	99	74.080	Scleropages_formosus
ENSCPOG00000000959	THOC1	98	70.200	ENSSMAG00000018465	thoc1	99	70.200	Scophthalmus_maximus
ENSCPOG00000000959	THOC1	98	72.350	ENSSDUG00000016810	thoc1	99	72.350	Seriola_dumerili
ENSCPOG00000000959	THOC1	98	72.043	ENSSLDG00000015555	thoc1	99	72.043	Seriola_lalandi_dorsalis
ENSCPOG00000000959	THOC1	88	94.636	ENSSARG00000006910	THOC1	88	94.636	Sorex_araneus
ENSCPOG00000000959	THOC1	98	88.665	ENSSPUG00000007238	THOC1	99	88.550	Sphenodon_punctatus
ENSCPOG00000000959	THOC1	98	69.266	ENSSPAG00000018847	thoc1	99	69.266	Stegastes_partitus
ENSCPOG00000000959	THOC1	100	95.890	ENSSSCG00000025653	THOC1	94	95.890	Sus_scrofa
ENSCPOG00000000959	THOC1	99	90.687	ENSTGUG00000010204	THOC1	99	90.687	Taeniopygia_guttata
ENSCPOG00000000959	THOC1	98	71.012	ENSTRUG00000013518	thoc1	99	71.012	Takifugu_rubripes
ENSCPOG00000000959	THOC1	98	72.086	ENSTNIG00000008473	thoc1	99	72.086	Tetraodon_nigroviridis
ENSCPOG00000000959	THOC1	100	88.280	ENSTBEG00000016920	THOC1	100	88.280	Tupaia_belangeri
ENSCPOG00000000959	THOC1	100	88.889	ENSTTRG00000016664	THOC1	100	88.889	Tursiops_truncatus
ENSCPOG00000000959	THOC1	100	96.195	ENSUAMG00000002527	THOC1	100	96.195	Ursus_americanus
ENSCPOG00000000959	THOC1	100	96.195	ENSUMAG00000019693	THOC1	100	96.195	Ursus_maritimus
ENSCPOG00000000959	THOC1	77	94.000	ENSVPAG00000003726	-	77	94.000	Vicugna_pacos
ENSCPOG00000000959	THOC1	100	96.195	ENSVVUG00000004384	THOC1	100	96.195	Vulpes_vulpes
ENSCPOG00000000959	THOC1	99	78.333	ENSXETG00000003155	thoc1	98	78.333	Xenopus_tropicalis
ENSCPOG00000000959	THOC1	93	69.722	ENSXCOG00000016085	thoc1	89	69.722	Xiphophorus_couchianus
ENSCPOG00000000959	THOC1	98	71.319	ENSXMAG00000002353	thoc1	99	71.319	Xiphophorus_maculatus