EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001008 (Gene tree)
Gene ID: 100715451
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 13898 bases
Position: chrDS563223.1:194584-208481
Accession: 100715451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000907	RRM_1	PF00076.22	3.8e-29	1	3
ENSCPOP00000000907	RRM_1	PF00076.22	3.8e-29	2	3
ENSCPOP00000000907	RRM_1	PF00076.22	3.8e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001016	RAVER1-201	3299	XM_003460858	ENSCPOP00000000907	740 (aa)	XP_003460906	H0UV82

Gene Model

Click here to download ENSCPOG00000001008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001008	RAVER1	100	89.744	ENSG00000161847	RAVER1	100	89.609	Homo_sapiens
ENSCPOG00000001008	RAVER1	66	59.146	ENSAPOG00000017267	raver1	60	58.907	Acanthochromis_polyacanthus
ENSCPOG00000001008	RAVER1	100	89.339	ENSAMEG00000011738	RAVER1	98	88.799	Ailuropoda_melanoleuca
ENSCPOG00000001008	RAVER1	66	59.432	ENSAOCG00000005128	raver1	64	57.968	Amphiprion_ocellaris
ENSCPOG00000001008	RAVER1	74	75.439	ENSAPEG00000010854	raver1	80	78.846	Amphiprion_percula
ENSCPOG00000001008	RAVER1	98	51.289	ENSATEG00000021004	raver1	91	50.136	Anabas_testudineus
ENSCPOG00000001008	RAVER1	84	60.155	ENSACAG00000008386	-	91	58.522	Anolis_carolinensis
ENSCPOG00000001008	RAVER1	100	88.124	ENSANAG00000028226	RAVER1	98	89.204	Aotus_nancymaae
ENSCPOG00000001008	RAVER1	73	85.417	ENSACLG00000018492	raver1	75	85.417	Astatotilapia_calliptera
ENSCPOG00000001008	RAVER1	78	78.333	ENSAMXG00000005132	raver1	79	84.906	Astyanax_mexicanus
ENSCPOG00000001008	RAVER1	100	92.500	ENSBTAG00000015721	RAVER1	97	92.500	Bos_taurus
ENSCPOG00000001008	RAVER1	100	88.124	ENSCJAG00000005671	RAVER1	98	89.204	Callithrix_jacchus
ENSCPOG00000001008	RAVER1	100	87.838	ENSCAFG00000017861	RAVER1	98	87.838	Canis_familiaris
ENSCPOG00000001008	RAVER1	100	87.838	ENSCAFG00020024449	RAVER1	100	87.838	Canis_lupus_dingo
ENSCPOG00000001008	RAVER1	100	87.314	ENSCHIG00000006718	RAVER1	100	87.314	Capra_hircus
ENSCPOG00000001008	RAVER1	91	83.876	ENSTSYG00000027107	RAVER1	100	84.320	Carlito_syrichta
ENSCPOG00000001008	RAVER1	90	96.552	ENSCAPG00000002269	RAVER1	100	96.552	Cavia_aperea
ENSCPOG00000001008	RAVER1	100	88.799	ENSCCAG00000031723	RAVER1	98	89.204	Cebus_capucinus
ENSCPOG00000001008	RAVER1	100	90.013	ENSCATG00000043863	RAVER1	98	90.283	Cercocebus_atys
ENSCPOG00000001008	RAVER1	100	93.666	ENSCLAG00000009336	RAVER1	100	93.127	Chinchilla_lanigera
ENSCPOG00000001008	RAVER1	100	90.148	ENSCSAG00000007317	RAVER1	84	90.418	Chlorocebus_sabaeus
ENSCPOG00000001008	RAVER1	96	62.113	ENSCPBG00000005349	-	96	61.269	Chrysemys_picta_bellii
ENSCPOG00000001008	RAVER1	100	90.148	ENSCANG00000008337	RAVER1	98	90.418	Colobus_angolensis_palliatus
ENSCPOG00000001008	RAVER1	100	90.701	ENSCGRG00001013260	-	100	90.027	Cricetulus_griseus_chok1gshd
ENSCPOG00000001008	RAVER1	100	90.701	ENSCGRG00000015138	-	100	90.027	Cricetulus_griseus_crigri
ENSCPOG00000001008	RAVER1	99	48.635	ENSCSEG00000021092	raver1	75	78.846	Cynoglossus_semilaevis
ENSCPOG00000001008	RAVER1	97	51.552	ENSCVAG00000013971	raver1	81	57.505	Cyprinodon_variegatus
ENSCPOG00000001008	RAVER1	100	65.741	ENSDNOG00000035742	-	50	79.581	Dasypus_novemcinctus
ENSCPOG00000001008	RAVER1	100	83.223	ENSDORG00000010106	-	100	81.902	Dipodomys_ordii
ENSCPOG00000001008	RAVER1	67	79.221	ENSETEG00000008201	-	75	87.310	Echinops_telfairi
ENSCPOG00000001008	RAVER1	65	93.548	ENSEASG00005010544	-	90	88.736	Equus_asinus_asinus
ENSCPOG00000001008	RAVER1	100	90.553	ENSECAG00000024966	RAVER1	98	90.688	Equus_caballus
ENSCPOG00000001008	RAVER1	97	51.444	ENSELUG00000023287	raver1	91	52.654	Esox_lucius
ENSCPOG00000001008	RAVER1	100	90.823	ENSFCAG00000009435	RAVER1	98	90.418	Felis_catus
ENSCPOG00000001008	RAVER1	100	91.914	ENSFDAG00000015113	RAVER1	100	91.779	Fukomys_damarensis
ENSCPOG00000001008	RAVER1	98	50.672	ENSGMOG00000003649	raver1	81	59.192	Gadus_morhua
ENSCPOG00000001008	RAVER1	96	62.166	ENSGAGG00000011748	-	93	78.324	Gopherus_agassizii
ENSCPOG00000001008	RAVER1	100	89.474	ENSGGOG00000006015	RAVER1	98	89.339	Gorilla_gorilla
ENSCPOG00000001008	RAVER1	74	82.353	ENSHBUG00000021210	raver1	75	82.353	Haplochromis_burtoni
ENSCPOG00000001008	RAVER1	100	91.779	ENSHGLG00000015460	RAVER1	100	91.644	Heterocephalus_glaber_female
ENSCPOG00000001008	RAVER1	100	91.779	ENSHGLG00100000812	RAVER1	100	91.644	Heterocephalus_glaber_male
ENSCPOG00000001008	RAVER1	98	51.023	ENSIPUG00000013153	raver1	75	87.755	Ictalurus_punctatus
ENSCPOG00000001008	RAVER1	100	91.240	ENSSTOG00000003241	RAVER1	100	89.623	Ictidomys_tridecemlineatus
ENSCPOG00000001008	RAVER1	100	89.382	ENSJJAG00000018219	-	100	88.306	Jaculus_jaculus
ENSCPOG00000001008	RAVER1	98	50.877	ENSKMAG00000017355	raver1	65	59.298	Kryptolebias_marmoratus
ENSCPOG00000001008	RAVER1	68	59.486	ENSLBEG00000008268	raver1	68	58.835	Labrus_bergylta
ENSCPOG00000001008	RAVER1	90	59.143	ENSLACG00000005809	-	99	58.680	Latimeria_chalumnae
ENSCPOG00000001008	RAVER1	96	56.393	ENSLOCG00000007500	raver1	94	54.868	Lepisosteus_oculatus
ENSCPOG00000001008	RAVER1	100	88.275	ENSLAFG00000003664	-	100	88.949	Loxodonta_africana
ENSCPOG00000001008	RAVER1	100	89.744	ENSMFAG00000037977	RAVER1	98	90.013	Macaca_fascicularis
ENSCPOG00000001008	RAVER1	100	89.879	ENSMMUG00000014897	RAVER1	98	90.148	Macaca_mulatta
ENSCPOG00000001008	RAVER1	100	89.879	ENSMNEG00000028390	RAVER1	98	90.148	Macaca_nemestrina
ENSCPOG00000001008	RAVER1	100	90.013	ENSMLEG00000041959	RAVER1	98	90.283	Mandrillus_leucophaeus
ENSCPOG00000001008	RAVER1	75	77.358	ENSMAMG00000012059	raver1	76	77.358	Mastacembelus_armatus
ENSCPOG00000001008	RAVER1	73	85.417	ENSMZEG00005019002	raver1	75	85.417	Maylandia_zebra
ENSCPOG00000001008	RAVER1	100	90.457	ENSMAUG00000017948	-	100	89.247	Mesocricetus_auratus
ENSCPOG00000001008	RAVER1	99	88.092	ENSMICG00000010326	RAVER1	99	87.989	Microcebus_murinus
ENSCPOG00000001008	RAVER1	100	90.836	ENSMOCG00000015553	-	100	90.162	Microtus_ochrogaster
ENSCPOG00000001008	RAVER1	99	50.270	ENSMMOG00000012093	raver1	91	50.069	Mola_mola
ENSCPOG00000001008	RAVER1	97	75.657	ENSMODG00000005584	-	89	75.657	Monodelphis_domestica
ENSCPOG00000001008	RAVER1	98	49.659	ENSMALG00000016569	raver1	82	56.371	Monopterus_albus
ENSCPOG00000001008	RAVER1	100	88.636	MGP_CAROLIEiJ_G0031860	-	100	87.299	Mus_caroli
ENSCPOG00000001008	RAVER1	100	88.770	ENSMUSG00000010205	Raver1	100	88.235	Mus_musculus
ENSCPOG00000001008	RAVER1	100	87.500	MGP_PahariEiJ_G0014726	-	100	86.968	Mus_pahari
ENSCPOG00000001008	RAVER1	100	88.636	MGP_SPRETEiJ_G0032984	-	100	88.102	Mus_spretus
ENSCPOG00000001008	RAVER1	100	90.283	ENSMPUG00000006712	RAVER1	98	89.744	Mustela_putorius_furo
ENSCPOG00000001008	RAVER1	100	87.568	ENSMLUG00000012328	RAVER1	100	87.568	Myotis_lucifugus
ENSCPOG00000001008	RAVER1	100	88.799	ENSNGAG00000001260	-	100	88.259	Nannospalax_galili
ENSCPOG00000001008	RAVER1	78	61.250	ENSNBRG00000010139	raver1	72	82.692	Neolamprologus_brichardi
ENSCPOG00000001008	RAVER1	100	89.204	ENSNLEG00000012181	RAVER1	98	89.474	Nomascus_leucogenys
ENSCPOG00000001008	RAVER1	90	75.483	ENSMEUG00000003281	-	100	74.591	Notamacropus_eugenii
ENSCPOG00000001008	RAVER1	51	90.625	ENSOPRG00000005855	-	51	86.719	Ochotona_princeps
ENSCPOG00000001008	RAVER1	100	93.127	ENSODEG00000016260	RAVER1	100	91.914	Octodon_degus
ENSCPOG00000001008	RAVER1	76	60.000	ENSONIG00000001559	raver1	78	82.353	Oreochromis_niloticus
ENSCPOG00000001008	RAVER1	100	82.838	ENSOCUG00000020918	RAVER1	98	82.568	Oryctolagus_cuniculus
ENSCPOG00000001008	RAVER1	68	66.748	ENSORLG00000005458	raver1	66	68.448	Oryzias_latipes
ENSCPOG00000001008	RAVER1	68	66.749	ENSORLG00020004392	raver1	66	68.205	Oryzias_latipes_hni
ENSCPOG00000001008	RAVER1	68	66.259	ENSORLG00015017222	raver1	66	67.939	Oryzias_latipes_hsok
ENSCPOG00000001008	RAVER1	60	81.633	ENSOMEG00000023956	raver1	66	81.633	Oryzias_melastigma
ENSCPOG00000001008	RAVER1	100	90.270	ENSOGAG00000011071	RAVER1	98	89.054	Otolemur_garnettii
ENSCPOG00000001008	RAVER1	100	84.646	ENSOARG00000015886	RAVER1	98	85.830	Ovis_aries
ENSCPOG00000001008	RAVER1	100	89.744	ENSPPAG00000002611	RAVER1	98	89.609	Pan_paniscus
ENSCPOG00000001008	RAVER1	100	91.228	ENSPPRG00000009912	RAVER1	98	90.823	Panthera_pardus
ENSCPOG00000001008	RAVER1	100	89.744	ENSPTRG00000010466	RAVER1	98	89.609	Pan_troglodytes
ENSCPOG00000001008	RAVER1	100	89.879	ENSPANG00000004122	RAVER1	98	90.148	Papio_anubis
ENSCPOG00000001008	RAVER1	100	90.444	ENSPEMG00000016411	-	100	90.175	Peromyscus_maniculatus_bairdii
ENSCPOG00000001008	RAVER1	100	77.212	ENSPCIG00000018695	-	99	81.457	Phascolarctos_cinereus
ENSCPOG00000001008	RAVER1	98	49.867	ENSPFOG00000007016	raver1	66	58.333	Poecilia_formosa
ENSCPOG00000001008	RAVER1	55	80.000	ENSPLAG00000020793	raver1	54	80.000	Poecilia_latipinna
ENSCPOG00000001008	RAVER1	96	52.138	ENSPMEG00000011220	raver1	66	68.462	Poecilia_mexicana
ENSCPOG00000001008	RAVER1	72	88.372	ENSPREG00000006864	raver1	75	88.372	Poecilia_reticulata
ENSCPOG00000001008	RAVER1	100	88.784	ENSPPYG00000010514	RAVER1	84	88.799	Pongo_abelii
ENSCPOG00000001008	RAVER1	100	90.579	ENSPCOG00000026605	RAVER1	98	90.040	Propithecus_coquereli
ENSCPOG00000001008	RAVER1	100	90.946	ENSPVAG00000003689	RAVER1	100	89.595	Pteropus_vampyrus
ENSCPOG00000001008	RAVER1	64	82.353	ENSPNYG00000013284	raver1	64	82.353	Pundamilia_nyererei
ENSCPOG00000001008	RAVER1	100	88.636	ENSRNOG00000020710	Raver1	100	87.834	Rattus_norvegicus
ENSCPOG00000001008	RAVER1	100	90.013	ENSRBIG00000034702	RAVER1	98	90.283	Rhinopithecus_bieti
ENSCPOG00000001008	RAVER1	100	87.854	ENSRROG00000031186	RAVER1	98	88.124	Rhinopithecus_roxellana
ENSCPOG00000001008	RAVER1	100	86.235	ENSSBOG00000023423	RAVER1	98	86.775	Saimiri_boliviensis_boliviensis
ENSCPOG00000001008	RAVER1	90	76.036	ENSSHAG00000008181	-	90	75.888	Sarcophilus_harrisii
ENSCPOG00000001008	RAVER1	68	58.812	ENSSMAG00000004546	raver1	65	58.218	Scophthalmus_maximus
ENSCPOG00000001008	RAVER1	98	49.468	ENSSDUG00000021063	raver1	80	82.000	Seriola_dumerili
ENSCPOG00000001008	RAVER1	68	59.684	ENSSLDG00000014505	raver1	68	58.027	Seriola_lalandi_dorsalis
ENSCPOG00000001008	RAVER1	58	70.520	ENSSPAG00000000688	raver1	91	51.362	Stegastes_partitus
ENSCPOG00000001008	RAVER1	100	91.351	ENSSSCG00000013650	-	100	88.243	Sus_scrofa
ENSCPOG00000001008	RAVER1	98	50.134	ENSTRUG00000025641	raver1	64	58.436	Takifugu_rubripes
ENSCPOG00000001008	RAVER1	100	91.216	ENSTTRG00000009552	RAVER1	100	89.865	Tursiops_truncatus
ENSCPOG00000001008	RAVER1	100	91.498	ENSUAMG00000020385	RAVER1	98	90.958	Ursus_americanus
ENSCPOG00000001008	RAVER1	100	87.838	ENSVVUG00000028976	RAVER1	98	87.838	Vulpes_vulpes
ENSCPOG00000001008	RAVER1	100	56.110	ENSXETG00000011622	raver1	94	56.267	Xenopus_tropicalis
ENSCPOG00000001008	RAVER1	99	50.467	ENSXCOG00000016368	raver1	91	51.046	Xiphophorus_couchianus
ENSCPOG00000001008	RAVER1	99	50.467	ENSXMAG00000000217	raver1	66	59.674	Xiphophorus_maculatus