EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001034 (Gene tree)
Gene ID: 100735210
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 9191 bases
Position: chrDS562868.1:29834417-29843607
Accession: 100735210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000000932	RRM_1	PF00076.22	2.9e-59	1	4
ENSCPOP00000000932	RRM_1	PF00076.22	2.9e-59	2	4
ENSCPOP00000000932	RRM_1	PF00076.22	2.9e-59	3	4
ENSCPOP00000000932	RRM_1	PF00076.22	2.9e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001043	NCL-201	2694	XM_003474598	ENSCPOP00000000932	713 (aa)	XP_003474646	H0UVA7

Gene Model

Click here to download ENSCPOG00000001034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001034	NCL	92	78.636	ENSG00000115053	NCL	100	89.189	Homo_sapiens
ENSCPOG00000001034	NCL	62	94.077	ENSAMEG00000016289	NCL	92	81.997	Ailuropoda_melanoleuca
ENSCPOG00000001034	NCL	99	67.660	ENSANAG00000024378	-	83	74.934	Aotus_nancymaae
ENSCPOG00000001034	NCL	62	90.045	ENSANAG00000035814	-	92	79.179	Aotus_nancymaae
ENSCPOG00000001034	NCL	75	88.115	ENSBTAG00000050728	-	87	88.115	Bos_taurus
ENSCPOG00000001034	NCL	54	89.583	ENSBTAG00000026909	-	83	89.958	Bos_taurus
ENSCPOG00000001034	NCL	79	89.706	ENSBTAG00000051320	-	86	87.793	Bos_taurus
ENSCPOG00000001034	NCL	94	79.420	ENSBTAG00000016174	NCL	54	93.140	Bos_taurus
ENSCPOG00000001034	NCL	53	94.195	ENSCJAG00000013538	NCL	53	94.195	Callithrix_jacchus
ENSCPOG00000001034	NCL	100	83.333	ENSCAFG00000011037	NCL	92	82.727	Canis_familiaris
ENSCPOG00000001034	NCL	84	83.526	ENSCAFG00020023145	NCL	89	84.020	Canis_lupus_dingo
ENSCPOG00000001034	NCL	85	83.089	ENSCHIG00000010894	-	66	93.850	Capra_hircus
ENSCPOG00000001034	NCL	92	94.248	ENSCHIG00000021052	-	96	94.425	Capra_hircus
ENSCPOG00000001034	NCL	92	61.256	ENSCHIG00000012143	-	60	78.100	Capra_hircus
ENSCPOG00000001034	NCL	92	74.699	ENSCHIG00000026149	-	53	86.016	Capra_hircus
ENSCPOG00000001034	NCL	90	65.474	ENSTSYG00000036886	-	91	70.365	Carlito_syrichta
ENSCPOG00000001034	NCL	92	82.246	ENSTSYG00000004355	-	92	81.487	Carlito_syrichta
ENSCPOG00000001034	NCL	95	79.655	ENSTSYG00000029779	-	98	78.291	Carlito_syrichta
ENSCPOG00000001034	NCL	99	96.181	ENSCAPG00000009405	NCL	100	96.181	Cavia_aperea
ENSCPOG00000001034	NCL	53	94.195	ENSCCAG00000021040	-	62	92.483	Cebus_capucinus
ENSCPOG00000001034	NCL	55	86.935	ENSCCAG00000000551	-	85	87.065	Cebus_capucinus
ENSCPOG00000001034	NCL	92	83.409	ENSCATG00000037033	NCL	53	94.195	Cercocebus_atys
ENSCPOG00000001034	NCL	100	91.341	ENSCLAG00000013080	NCL	92	91.006	Chinchilla_lanigera
ENSCPOG00000001034	NCL	53	93.947	ENSCSAG00000006660	NCL	95	94.761	Chlorocebus_sabaeus
ENSCPOG00000001034	NCL	61	72.414	ENSCHOG00000012860	NCL	78	77.513	Choloepus_hoffmanni
ENSCPOG00000001034	NCL	92	65.762	ENSCGRG00001022350	-	56	78.158	Cricetulus_griseus_chok1gshd
ENSCPOG00000001034	NCL	92	78.506	ENSCGRG00001024315	-	53	88.127	Cricetulus_griseus_chok1gshd
ENSCPOG00000001034	NCL	92	64.318	ENSCGRG00000000507	-	56	78.158	Cricetulus_griseus_crigri
ENSCPOG00000001034	NCL	86	80.775	ENSCGRG00000017894	-	54	88.127	Cricetulus_griseus_crigri
ENSCPOG00000001034	NCL	92	81.846	ENSDNOG00000010783	-	92	81.694	Dasypus_novemcinctus
ENSCPOG00000001034	NCL	100	73.045	ENSDNOG00000046347	-	99	72.067	Dasypus_novemcinctus
ENSCPOG00000001034	NCL	51	73.497	ENSDORG00000023596	-	52	73.497	Dipodomys_ordii
ENSCPOG00000001034	NCL	53	83.113	ENSDORG00000012513	-	54	83.113	Dipodomys_ordii
ENSCPOG00000001034	NCL	53	87.632	ENSETEG00000018937	-	53	87.599	Echinops_telfairi
ENSCPOG00000001034	NCL	71	64.499	ENSETEG00000008139	-	89	64.324	Echinops_telfairi
ENSCPOG00000001034	NCL	62	59.234	ENSETEG00000008553	-	80	62.368	Echinops_telfairi
ENSCPOG00000001034	NCL	53	87.533	ENSETEG00000014756	-	86	87.599	Echinops_telfairi
ENSCPOG00000001034	NCL	98	82.744	ENSEASG00005008488	NCL	94	96.786	Equus_asinus_asinus
ENSCPOG00000001034	NCL	92	80.995	ENSECAG00000021868	NCL	92	80.514	Equus_caballus
ENSCPOG00000001034	NCL	86	78.689	ENSEEUG00000005913	NCL	54	87.599	Erinaceus_europaeus
ENSCPOG00000001034	NCL	100	84.605	ENSFCAG00000027622	NCL	92	82.905	Felis_catus
ENSCPOG00000001034	NCL	91	86.350	ENSFDAG00000014291	NCL	92	86.043	Fukomys_damarensis
ENSCPOG00000001034	NCL	92	82.827	ENSGGOG00000004300	NCL	100	91.531	Gorilla_gorilla
ENSCPOG00000001034	NCL	92	88.737	ENSHGLG00000002031	-	92	88.280	Heterocephalus_glaber_female
ENSCPOG00000001034	NCL	91	78.560	ENSHGLG00000011069	-	55	88.889	Heterocephalus_glaber_female
ENSCPOG00000001034	NCL	92	89.177	ENSHGLG00100014537	-	100	88.827	Heterocephalus_glaber_male
ENSCPOG00000001034	NCL	53	80.211	ENSJJAG00000016165	Ncl	53	80.211	Jaculus_jaculus
ENSCPOG00000001034	NCL	91	70.597	ENSLAFG00000013061	NCL	91	67.786	Loxodonta_africana
ENSCPOG00000001034	NCL	92	82.827	ENSMFAG00000040385	NCL	53	94.195	Macaca_fascicularis
ENSCPOG00000001034	NCL	92	82.827	ENSMMUG00000018094	NCL	95	97.500	Macaca_mulatta
ENSCPOG00000001034	NCL	62	89.367	ENSMNEG00000023839	NCL	94	97.500	Macaca_nemestrina
ENSCPOG00000001034	NCL	92	83.257	ENSMLEG00000028935	NCL	53	94.195	Mandrillus_leucophaeus
ENSCPOG00000001034	NCL	100	82.706	ENSMICG00000002538	-	92	81.250	Microcebus_murinus
ENSCPOG00000001034	NCL	92	68.140	ENSMICG00000029975	-	91	77.255	Microcebus_murinus
ENSCPOG00000001034	NCL	92	76.104	MGP_CAROLIEiJ_G0014362	Ncl	53	85.752	Mus_caroli
ENSCPOG00000001034	NCL	92	75.190	ENSMUSG00000026234	Ncl	53	85.488	Mus_musculus
ENSCPOG00000001034	NCL	92	75.873	MGP_PahariEiJ_G0027599	Ncl	92	75.873	Mus_pahari
ENSCPOG00000001034	NCL	92	75.380	MGP_SPRETEiJ_G0015164	Ncl	92	75.684	Mus_spretus
ENSCPOG00000001034	NCL	92	81.791	ENSMLUG00000014547	NCL	92	81.487	Myotis_lucifugus
ENSCPOG00000001034	NCL	92	78.561	ENSNGAG00000002454	-	53	89.710	Nannospalax_galili
ENSCPOG00000001034	NCL	72	71.504	ENSNGAG00000006188	-	54	71.504	Nannospalax_galili
ENSCPOG00000001034	NCL	86	72.777	ENSNLEG00000014107	-	95	72.131	Nomascus_leucogenys
ENSCPOG00000001034	NCL	62	83.144	ENSODEG00000002441	-	85	73.759	Octodon_degus
ENSCPOG00000001034	NCL	99	68.627	ENSODEG00000007803	-	90	67.736	Octodon_degus
ENSCPOG00000001034	NCL	91	85.890	ENSODEG00000003281	-	91	85.452	Octodon_degus
ENSCPOG00000001034	NCL	73	86.016	ENSOGAG00000027852	NCL	84	86.016	Otolemur_garnettii
ENSCPOG00000001034	NCL	91	77.454	ENSOARG00000020709	-	56	91.885	Ovis_aries
ENSCPOG00000001034	NCL	62	74.831	ENSOARG00000004072	-	61	76.253	Ovis_aries
ENSCPOG00000001034	NCL	69	86.927	ENSOARG00000013710	-	64	90.765	Ovis_aries
ENSCPOG00000001034	NCL	92	78.939	ENSPPAG00000011619	NCL	100	91.531	Pan_paniscus
ENSCPOG00000001034	NCL	100	84.861	ENSPPRG00000012603	NCL	92	83.333	Panthera_pardus
ENSCPOG00000001034	NCL	91	83.180	ENSPTIG00000010393	NCL	91	82.416	Panthera_tigris_altaica
ENSCPOG00000001034	NCL	92	83.156	ENSPTRG00000013025	NCL	100	91.857	Pan_troglodytes
ENSCPOG00000001034	NCL	92	82.827	ENSPANG00000010292	NCL	53	94.195	Papio_anubis
ENSCPOG00000001034	NCL	100	78.947	ENSPPYG00000013265	NCL	53	85.379	Pongo_abelii
ENSCPOG00000001034	NCL	92	83.131	ENSPCOG00000003051	-	91	81.431	Propithecus_coquereli
ENSCPOG00000001034	NCL	91	77.914	ENSPCOG00000004160	-	86	86.772	Propithecus_coquereli
ENSCPOG00000001034	NCL	92	83.435	ENSPVAG00000000297	NCL	92	82.192	Pteropus_vampyrus
ENSCPOG00000001034	NCL	92	77.761	ENSRNOG00000018273	Ncl	92	79.123	Rattus_norvegicus
ENSCPOG00000001034	NCL	89	95.502	ENSRBIG00000035396	-	89	93.624	Rhinopithecus_bieti
ENSCPOG00000001034	NCL	92	78.267	ENSRBIG00000037525	-	54	91.557	Rhinopithecus_bieti
ENSCPOG00000001034	NCL	92	82.675	ENSRROG00000028756	-	82	96.818	Rhinopithecus_roxellana
ENSCPOG00000001034	NCL	99	79.352	ENSRROG00000036103	-	83	95.480	Rhinopithecus_roxellana
ENSCPOG00000001034	NCL	55	74.429	ENSSBOG00000023094	-	84	74.661	Saimiri_boliviensis_boliviensis
ENSCPOG00000001034	NCL	53	93.931	ENSSBOG00000029193	-	53	93.931	Saimiri_boliviensis_boliviensis
ENSCPOG00000001034	NCL	70	84.431	ENSSBOG00000027549	-	98	87.472	Saimiri_boliviensis_boliviensis
ENSCPOG00000001034	NCL	92	80.988	ENSSSCG00000016275	NCL	92	80.240	Sus_scrofa
ENSCPOG00000001034	NCL	65	79.887	ENSTBEG00000002469	-	66	79.714	Tupaia_belangeri
ENSCPOG00000001034	NCL	88	76.759	ENSTBEG00000001546	-	85	76.596	Tupaia_belangeri
ENSCPOG00000001034	NCL	92	81.431	ENSTTRG00000009094	NCL	53	91.534	Tursiops_truncatus
ENSCPOG00000001034	NCL	72	93.140	ENSUAMG00000005639	NCL	89	94.077	Ursus_americanus
ENSCPOG00000001034	NCL	62	94.077	ENSUMAG00000015789	NCL	92	82.648	Ursus_maritimus
ENSCPOG00000001034	NCL	69	80.290	ENSVPAG00000001796	NCL	69	80.290	Vicugna_pacos
ENSCPOG00000001034	NCL	100	81.818	ENSVVUG00000025564	NCL	100	81.399	Vulpes_vulpes