EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001173 (Gene tree)
Gene ID: 100719104
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 7616 bases
Position: chrDS562856.1:31144510-31152125
Accession: 100719104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025770	EXOSC1	PF10447.9	4.8e-15	1	1
ENSCPOP00000001058	ECR1_N	PF14382.6	3.5e-09	1	1
ENSCPOP00000025770	ECR1_N	PF14382.6	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045028	EXOSC1-201	1526	XM_003479767	ENSCPOP00000025770	195 (aa)	XP_003479815	A0A286XJU9
ENSCPOT00000001185	EXOSC1-202	465	-	ENSCPOP00000001058	154 (aa)	-	H0UVL6

Gene Model

Click here to download ENSCPOG00000001173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001173	EXOSC1	100	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSCPOG00000001173	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSAMEG00000000129	EXOSC1	100	98.462	Ailuropoda_melanoleuca
ENSCPOG00000001173	EXOSC1	96	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSCPOG00000001173	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSCPOG00000001173	EXOSC1	92	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSCPOG00000001173	EXOSC1	98	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSCPOG00000001173	EXOSC1	99	85.052	ENSACAG00000002101	EXOSC1	99	85.052	Anolis_carolinensis
ENSCPOG00000001173	EXOSC1	100	98.462	ENSANAG00000034669	EXOSC1	100	98.462	Aotus_nancymaae
ENSCPOG00000001173	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSCPOG00000001173	EXOSC1	98	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSCPOG00000001173	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSCPOG00000001173	EXOSC1	100	98.052	ENSCJAG00000016586	EXOSC1	100	98.052	Callithrix_jacchus
ENSCPOG00000001173	EXOSC1	100	97.949	ENSCAFG00000009068	EXOSC1	94	97.949	Canis_familiaris
ENSCPOG00000001173	EXOSC1	100	97.949	ENSCAFG00020006002	EXOSC1	94	97.949	Canis_lupus_dingo
ENSCPOG00000001173	EXOSC1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSCPOG00000001173	EXOSC1	100	97.436	ENSTSYG00000000760	EXOSC1	100	97.436	Carlito_syrichta
ENSCPOG00000001173	EXOSC1	100	59.006	ENSCCAG00000023986	EXOSC1	100	59.006	Cebus_capucinus
ENSCPOG00000001173	EXOSC1	100	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSCPOG00000001173	EXOSC1	100	99.487	ENSCLAG00000002463	EXOSC1	100	99.487	Chinchilla_lanigera
ENSCPOG00000001173	EXOSC1	100	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSCPOG00000001173	EXOSC1	96	83.422	ENSCHOG00000006477	EXOSC1	100	83.422	Choloepus_hoffmanni
ENSCPOG00000001173	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSCPOG00000001173	EXOSC1	95	56.150	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSCPOG00000001173	EXOSC1	95	58.289	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSCPOG00000001173	EXOSC1	100	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSCPOG00000001173	EXOSC1	100	98.052	ENSCGRG00001000335	Exosc1	100	98.052	Cricetulus_griseus_chok1gshd
ENSCPOG00000001173	EXOSC1	100	98.052	ENSCGRG00000011602	Exosc1	100	98.052	Cricetulus_griseus_crigri
ENSCPOG00000001173	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSCPOG00000001173	EXOSC1	98	76.042	ENSCVAG00000016748	exosc1	99	76.042	Cyprinodon_variegatus
ENSCPOG00000001173	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSCPOG00000001173	EXOSC1	75	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSCPOG00000001173	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSCPOG00000001173	EXOSC1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSCPOG00000001173	EXOSC1	100	96.410	ENSETEG00000002469	-	100	96.410	Echinops_telfairi
ENSCPOG00000001173	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSCPOG00000001173	EXOSC1	100	87.692	ENSEASG00005008684	EXOSC1	100	87.692	Equus_asinus_asinus
ENSCPOG00000001173	EXOSC1	61	77.311	ENSECAG00000010621	EXOSC1	71	77.311	Equus_caballus
ENSCPOG00000001173	EXOSC1	100	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSCPOG00000001173	EXOSC1	94	80.978	ENSELUG00000017369	exosc1	81	80.978	Esox_lucius
ENSCPOG00000001173	EXOSC1	100	98.462	ENSFCAG00000040563	EXOSC1	94	98.462	Felis_catus
ENSCPOG00000001173	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSCPOG00000001173	EXOSC1	100	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSCPOG00000001173	EXOSC1	98	76.042	ENSFHEG00000009154	exosc1	99	76.042	Fundulus_heteroclitus
ENSCPOG00000001173	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSCPOG00000001173	EXOSC1	100	72.308	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSCPOG00000001173	EXOSC1	98	76.042	ENSGAFG00000010265	exosc1	94	76.042	Gambusia_affinis
ENSCPOG00000001173	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSCPOG00000001173	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSCPOG00000001173	EXOSC1	100	84.615	ENSGGOG00000003099	EXOSC1	100	84.615	Gorilla_gorilla
ENSCPOG00000001173	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSCPOG00000001173	EXOSC1	100	98.052	ENSHGLG00000016927	EXOSC1	100	98.052	Heterocephalus_glaber_female
ENSCPOG00000001173	EXOSC1	100	98.052	ENSHGLG00100012208	EXOSC1	100	98.052	Heterocephalus_glaber_male
ENSCPOG00000001173	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSCPOG00000001173	EXOSC1	98	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSCPOG00000001173	EXOSC1	63	82.787	ENSSTOG00000029860	-	93	82.787	Ictidomys_tridecemlineatus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSSTOG00000006615	EXOSC1	100	98.462	Ictidomys_tridecemlineatus
ENSCPOG00000001173	EXOSC1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSCPOG00000001173	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSCPOG00000001173	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSCPOG00000001173	EXOSC1	98	74.522	ENSLOCG00000003776	exosc1	99	74.522	Lepisosteus_oculatus
ENSCPOG00000001173	EXOSC1	100	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSCPOG00000001173	EXOSC1	100	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSCPOG00000001173	EXOSC1	100	96.923	ENSMMUG00000020028	EXOSC1	100	96.753	Macaca_mulatta
ENSCPOG00000001173	EXOSC1	100	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSCPOG00000001173	EXOSC1	100	96.753	ENSMLEG00000027643	EXOSC1	100	96.753	Mandrillus_leucophaeus
ENSCPOG00000001173	EXOSC1	98	80.208	ENSMAMG00000012200	exosc1	99	80.208	Mastacembelus_armatus
ENSCPOG00000001173	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSCPOG00000001173	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSCPOG00000001173	EXOSC1	100	97.949	ENSMICG00000007664	EXOSC1	100	97.403	Microcebus_murinus
ENSCPOG00000001173	EXOSC1	97	91.579	ENSMOCG00000017124	-	97	91.579	Microtus_ochrogaster
ENSCPOG00000001173	EXOSC1	100	98.052	ENSMOCG00000006004	-	100	98.052	Microtus_ochrogaster
ENSCPOG00000001173	EXOSC1	99	76.316	ENSMMOG00000021403	exosc1	99	76.316	Mola_mola
ENSCPOG00000001173	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSCPOG00000001173	EXOSC1	94	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSCPOG00000001173	EXOSC1	100	97.403	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.403	Mus_caroli
ENSCPOG00000001173	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSCPOG00000001173	EXOSC1	100	98.052	MGP_PahariEiJ_G0014449	Exosc1	100	98.052	Mus_pahari
ENSCPOG00000001173	EXOSC1	100	97.403	MGP_SPRETEiJ_G0023880	Exosc1	100	97.403	Mus_spretus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSMPUG00000017044	EXOSC1	100	98.462	Mustela_putorius_furo
ENSCPOG00000001173	EXOSC1	100	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSCPOG00000001173	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSCPOG00000001173	EXOSC1	98	76.821	ENSNBRG00000024007	exosc1	98	76.821	Neolamprologus_brichardi
ENSCPOG00000001173	EXOSC1	100	96.753	ENSNLEG00000013872	EXOSC1	100	96.753	Nomascus_leucogenys
ENSCPOG00000001173	EXOSC1	59	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSCPOG00000001173	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSCPOG00000001173	EXOSC1	100	98.974	ENSODEG00000016709	EXOSC1	100	98.974	Octodon_degus
ENSCPOG00000001173	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSCPOG00000001173	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSCPOG00000001173	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSCPOG00000001173	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSCPOG00000001173	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSCPOG00000001173	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSCPOG00000001173	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSCPOG00000001173	EXOSC1	97	64.740	ENSOMEG00000013907	exosc1	98	64.740	Oryzias_melastigma
ENSCPOG00000001173	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSCPOG00000001173	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSCPOG00000001173	EXOSC1	100	96.753	ENSPPAG00000039842	EXOSC1	100	96.753	Pan_paniscus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSPPRG00000023366	EXOSC1	100	98.462	Panthera_pardus
ENSCPOG00000001173	EXOSC1	100	98.462	ENSPTIG00000017701	EXOSC1	100	98.462	Panthera_tigris_altaica
ENSCPOG00000001173	EXOSC1	100	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSCPOG00000001173	EXOSC1	100	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSCPOG00000001173	EXOSC1	98	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSCPOG00000001173	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSCPOG00000001173	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSCPOG00000001173	EXOSC1	100	98.052	ENSPEMG00000010710	-	100	98.052	Peromyscus_maniculatus_bairdii
ENSCPOG00000001173	EXOSC1	95	71.658	ENSPMAG00000000195	exosc1	95	71.658	Petromyzon_marinus
ENSCPOG00000001173	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSCPOG00000001173	EXOSC1	98	75.521	ENSPFOG00000006755	exosc1	94	75.521	Poecilia_formosa
ENSCPOG00000001173	EXOSC1	98	75.521	ENSPLAG00000005880	exosc1	99	75.521	Poecilia_latipinna
ENSCPOG00000001173	EXOSC1	98	75.521	ENSPMEG00000015598	exosc1	94	75.521	Poecilia_mexicana
ENSCPOG00000001173	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSCPOG00000001173	EXOSC1	100	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSCPOG00000001173	EXOSC1	100	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSCPOG00000001173	EXOSC1	100	91.795	ENSPCOG00000027539	EXOSC1	100	91.795	Propithecus_coquereli
ENSCPOG00000001173	EXOSC1	100	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSCPOG00000001173	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSCPOG00000001173	EXOSC1	98	81.152	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSCPOG00000001173	EXOSC1	100	98.052	ENSRNOG00000048708	Exosc1	100	98.052	Rattus_norvegicus
ENSCPOG00000001173	EXOSC1	100	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSCPOG00000001173	EXOSC1	100	96.923	ENSRROG00000032589	EXOSC1	100	96.753	Rhinopithecus_roxellana
ENSCPOG00000001173	EXOSC1	100	98.462	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSCPOG00000001173	EXOSC1	75	96.599	ENSSHAG00000018219	EXOSC1	100	96.599	Sarcophilus_harrisii
ENSCPOG00000001173	EXOSC1	97	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSCPOG00000001173	EXOSC1	98	82.292	ENSSFOG00015009069	exosc1	99	82.292	Scleropages_formosus
ENSCPOG00000001173	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSCPOG00000001173	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSCPOG00000001173	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSCPOG00000001173	EXOSC1	100	83.590	ENSSARG00000000162	EXOSC1	100	83.590	Sorex_araneus
ENSCPOG00000001173	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSCPOG00000001173	EXOSC1	98	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSCPOG00000001173	EXOSC1	100	97.436	ENSSSCG00000010518	EXOSC1	91	97.436	Sus_scrofa
ENSCPOG00000001173	EXOSC1	98	81.771	ENSTGUG00000009692	EXOSC1	99	81.771	Taeniopygia_guttata
ENSCPOG00000001173	EXOSC1	97	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSCPOG00000001173	EXOSC1	97	73.575	ENSTNIG00000014079	exosc1	97	73.575	Tetraodon_nigroviridis
ENSCPOG00000001173	EXOSC1	100	89.231	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSCPOG00000001173	EXOSC1	94	98.370	ENSTTRG00000009887	EXOSC1	100	98.370	Tursiops_truncatus
ENSCPOG00000001173	EXOSC1	100	83.799	ENSUAMG00000010266	EXOSC1	100	83.799	Ursus_americanus
ENSCPOG00000001173	EXOSC1	100	83.799	ENSUMAG00000022002	EXOSC1	100	83.799	Ursus_maritimus
ENSCPOG00000001173	EXOSC1	100	97.949	ENSVVUG00000023192	EXOSC1	63	97.949	Vulpes_vulpes
ENSCPOG00000001173	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSCPOG00000001173	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSCPOG00000001173	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus