EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000001390 (Gene tree)
Gene ID: 100729317
Gene Symbol: ATXN2
Alias: ATX2|SCA2|TNRC13
Full Name: ataxin 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 114811 bases
Position: chrDS562970.1:2796711-2911521
Accession: 100729317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026179	PAM2	PF07145.15	4.5e-06	1	1
ENSCPOP00000001256	PAM2	PF07145.15	6.5e-06	1	1
ENSCPOP00000001256	LsmAD	PF06741.13	2.5e-16	1	1
ENSCPOP00000026179	LsmAD	PF06741.13	4.2e-16	1	1
ENSCPOP00000001256	SM-ATX	PF14438.6	4.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001409	ATXN2-202	3906	XM_013144819	ENSCPOP00000001256	1301 (aa)	-	H0UW34
ENSCPOT00000043999	ATXN2-201	2787	-	ENSCPOP00000026179	928 (aa)	-	A0A286XL50

Gene Model

Click here to download ENSCPOG00000001390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000001390	ATXN2	96	37.662	ENSCPOG00000010521	ATXN2L	99	38.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001390	ATXN2	96	96.193	ENSG00000204842	ATXN2	99	96.750	Homo_sapiens
ENSCPOG00000001390	ATXN2	96	44.952	ENSAPOG00000014663	atxn2	97	70.418	Acanthochromis_polyacanthus
ENSCPOG00000001390	ATXN2	96	94.402	ENSAMEG00000013747	ATXN2	100	96.735	Ailuropoda_melanoleuca
ENSCPOG00000001390	ATXN2	96	55.639	ENSACIG00000004928	atxn2	100	57.895	Amphilophus_citrinellus
ENSCPOG00000001390	ATXN2	96	50.903	ENSAOCG00000001107	atxn2	97	68.671	Amphiprion_ocellaris
ENSCPOG00000001390	ATXN2	96	50.903	ENSAPEG00000020250	atxn2	96	69.775	Amphiprion_percula
ENSCPOG00000001390	ATXN2	96	55.685	ENSATEG00000018587	atxn2	100	57.387	Anabas_testudineus
ENSCPOG00000001390	ATXN2	96	86.294	ENSAPLG00000008724	ATXN2	100	88.444	Anas_platyrhynchos
ENSCPOG00000001390	ATXN2	96	77.863	ENSACAG00000002419	ATXN2	100	80.741	Anolis_carolinensis
ENSCPOG00000001390	ATXN2	96	95.633	ENSANAG00000022522	ATXN2	100	93.860	Aotus_nancymaae
ENSCPOG00000001390	ATXN2	96	58.315	ENSACLG00000013359	atxn2	97	59.308	Astatotilapia_calliptera
ENSCPOG00000001390	ATXN2	78	69.279	ENSAMXG00000002342	atxn2	89	68.489	Astyanax_mexicanus
ENSCPOG00000001390	ATXN2	100	93.658	ENSBTAG00000022069	ATXN2	100	95.905	Bos_taurus
ENSCPOG00000001390	ATXN2	100	95.797	ENSCJAG00000011756	ATXN2	100	92.000	Callithrix_jacchus
ENSCPOG00000001390	ATXN2	100	89.506	ENSCAFG00000008606	ATXN2	100	90.418	Canis_familiaris
ENSCPOG00000001390	ATXN2	96	93.853	ENSCAFG00020017041	ATXN2	100	96.286	Canis_lupus_dingo
ENSCPOG00000001390	ATXN2	96	93.304	ENSCHIG00000012141	ATXN2	100	89.558	Capra_hircus
ENSCPOG00000001390	ATXN2	99	96.074	ENSTSYG00000002717	ATXN2	99	96.074	Carlito_syrichta
ENSCPOG00000001390	ATXN2	95	90.650	ENSCAPG00000013332	ATXN2	100	93.088	Cavia_aperea
ENSCPOG00000001390	ATXN2	99	95.965	ENSCCAG00000026267	ATXN2	99	95.965	Cebus_capucinus
ENSCPOG00000001390	ATXN2	100	93.975	ENSCATG00000017877	ATXN2	100	92.190	Cercocebus_atys
ENSCPOG00000001390	ATXN2	100	97.845	ENSCLAG00000009324	ATXN2	98	97.948	Chinchilla_lanigera
ENSCPOG00000001390	ATXN2	96	94.182	ENSCSAG00000002590	ATXN2	98	94.071	Chlorocebus_sabaeus
ENSCPOG00000001390	ATXN2	81	96.622	ENSCHOG00000004284	ATXN2	86	90.885	Choloepus_hoffmanni
ENSCPOG00000001390	ATXN2	96	69.357	ENSCPBG00000003465	ATXN2	66	83.591	Chrysemys_picta_bellii
ENSCPOG00000001390	ATXN2	99	96.074	ENSCANG00000042302	ATXN2	100	95.985	Colobus_angolensis_palliatus
ENSCPOG00000001390	ATXN2	100	85.012	ENSCGRG00001022603	Atxn2	95	86.953	Cricetulus_griseus_chok1gshd
ENSCPOG00000001390	ATXN2	100	93.211	ENSCGRG00000015823	Atxn2	98	93.575	Cricetulus_griseus_crigri
ENSCPOG00000001390	ATXN2	94	60.305	ENSCSEG00000009072	-	97	67.089	Cynoglossus_semilaevis
ENSCPOG00000001390	ATXN2	96	46.154	ENSCSEG00000018366	atxn2	97	69.132	Cynoglossus_semilaevis
ENSCPOG00000001390	ATXN2	92	67.094	ENSCVAG00000020160	atxn2	97	69.453	Cyprinodon_variegatus
ENSCPOG00000001390	ATXN2	96	60.999	ENSDARG00000052897	atxn2	97	61.704	Danio_rerio
ENSCPOG00000001390	ATXN2	96	93.085	ENSDNOG00000015696	ATXN2	100	93.224	Dasypus_novemcinctus
ENSCPOG00000001390	ATXN2	96	85.856	ENSDORG00000000808	Atxn2	99	85.487	Dipodomys_ordii
ENSCPOG00000001390	ATXN2	89	84.865	ENSETEG00000005224	ATXN2	77	94.444	Echinops_telfairi
ENSCPOG00000001390	ATXN2	100	96.013	ENSEASG00005012077	ATXN2	100	95.802	Equus_asinus_asinus
ENSCPOG00000001390	ATXN2	100	94.292	ENSECAG00000014347	ATXN2	98	89.110	Equus_caballus
ENSCPOG00000001390	ATXN2	72	96.190	ENSEEUG00000014635	-	73	94.754	Erinaceus_europaeus
ENSCPOG00000001390	ATXN2	96	57.361	ENSELUG00000019632	atxn2	97	63.836	Esox_lucius
ENSCPOG00000001390	ATXN2	96	95.409	ENSFCAG00000003178	ATXN2	99	93.546	Felis_catus
ENSCPOG00000001390	ATXN2	96	88.156	ENSFALG00000009001	ATXN2	100	84.696	Ficedula_albicollis
ENSCPOG00000001390	ATXN2	100	96.767	ENSFDAG00000020942	ATXN2	100	97.106	Fukomys_damarensis
ENSCPOG00000001390	ATXN2	93	66.527	ENSFHEG00000019561	atxn2	95	69.304	Fundulus_heteroclitus
ENSCPOG00000001390	ATXN2	88	61.980	ENSGMOG00000007412	atxn2	92	60.204	Gadus_morhua
ENSCPOG00000001390	ATXN2	97	82.174	ENSGALG00000004625	ATXN2	99	83.086	Gallus_gallus
ENSCPOG00000001390	ATXN2	92	67.521	ENSGAFG00000003302	atxn2	97	69.775	Gambusia_affinis
ENSCPOG00000001390	ATXN2	96	57.311	ENSGACG00000006295	atxn2	100	58.621	Gasterosteus_aculeatus
ENSCPOG00000001390	ATXN2	96	71.053	ENSGAGG00000005014	ATXN2	65	85.669	Gopherus_agassizii
ENSCPOG00000001390	ATXN2	96	95.857	ENSGGOG00000002137	ATXN2	100	96.476	Gorilla_gorilla
ENSCPOG00000001390	ATXN2	100	90.246	ENSHGLG00000009812	ATXN2	100	90.553	Heterocephalus_glaber_female
ENSCPOG00000001390	ATXN2	100	97.737	ENSHGLG00100019351	ATXN2	100	97.852	Heterocephalus_glaber_male
ENSCPOG00000001390	ATXN2	79	65.789	ENSHCOG00000005278	atxn2	94	67.601	Hippocampus_comes
ENSCPOG00000001390	ATXN2	100	96.444	ENSSTOG00000000978	ATXN2	100	96.639	Ictidomys_tridecemlineatus
ENSCPOG00000001390	ATXN2	96	47.441	ENSKMAG00000000980	atxn2	97	69.304	Kryptolebias_marmoratus
ENSCPOG00000001390	ATXN2	57	53.223	ENSLBEG00000017484	atxn2	96	52.283	Labrus_bergylta
ENSCPOG00000001390	ATXN2	96	73.023	ENSLACG00000012531	ATXN2	100	74.885	Latimeria_chalumnae
ENSCPOG00000001390	ATXN2	91	76.018	ENSLOCG00000007880	atxn2	97	73.101	Lepisosteus_oculatus
ENSCPOG00000001390	ATXN2	96	92.552	ENSLAFG00000007416	ATXN2	100	95.158	Loxodonta_africana
ENSCPOG00000001390	ATXN2	99	96.074	ENSMFAG00000000374	ATXN2	99	96.074	Macaca_fascicularis
ENSCPOG00000001390	ATXN2	99	96.074	ENSMMUG00000002226	ATXN2	100	96.381	Macaca_mulatta
ENSCPOG00000001390	ATXN2	100	96.013	ENSMNEG00000035588	ATXN2	100	93.953	Macaca_nemestrina
ENSCPOG00000001390	ATXN2	99	96.183	ENSMLEG00000024324	ATXN2	100	96.172	Mandrillus_leucophaeus
ENSCPOG00000001390	ATXN2	96	42.660	ENSMAMG00000019160	atxn2	95	69.775	Mastacembelus_armatus
ENSCPOG00000001390	ATXN2	96	85.996	ENSMGAG00000005288	ATXN2	100	88.093	Meleagris_gallopavo
ENSCPOG00000001390	ATXN2	64	91.960	ENSMAUG00000008223	-	100	90.147	Mesocricetus_auratus
ENSCPOG00000001390	ATXN2	99	96.292	ENSMICG00000013541	ATXN2	100	96.571	Microcebus_murinus
ENSCPOG00000001390	ATXN2	100	92.780	ENSMOCG00000005219	Atxn2	100	92.780	Microtus_ochrogaster
ENSCPOG00000001390	ATXN2	96	57.445	ENSMMOG00000013189	atxn2	100	59.169	Mola_mola
ENSCPOG00000001390	ATXN2	96	85.636	ENSMODG00000012221	ATXN2	85	88.022	Monodelphis_domestica
ENSCPOG00000001390	ATXN2	96	50.374	ENSMALG00000018529	atxn2	96	69.620	Monopterus_albus
ENSCPOG00000001390	ATXN2	100	86.917	MGP_CAROLIEiJ_G0027692	Atxn2	99	90.821	Mus_caroli
ENSCPOG00000001390	ATXN2	100	92.796	ENSMUSG00000042605	Atxn2	100	93.011	Mus_musculus
ENSCPOG00000001390	ATXN2	100	81.935	MGP_PahariEiJ_G0024272	Atxn2	100	88.563	Mus_pahari
ENSCPOG00000001390	ATXN2	100	93.018	MGP_SPRETEiJ_G0028690	Atxn2	100	93.126	Mus_spretus
ENSCPOG00000001390	ATXN2	96	91.877	ENSMPUG00000002212	ATXN2	100	94.590	Mustela_putorius_furo
ENSCPOG00000001390	ATXN2	96	91.877	ENSMLUG00000015559	ATXN2	100	94.413	Myotis_lucifugus
ENSCPOG00000001390	ATXN2	96	60.795	ENSNBRG00000015794	atxn2	99	60.335	Neolamprologus_brichardi
ENSCPOG00000001390	ATXN2	99	96.510	ENSNLEG00000000484	ATXN2	99	96.510	Nomascus_leucogenys
ENSCPOG00000001390	ATXN2	81	91.765	ENSMEUG00000012244	-	85	97.727	Notamacropus_eugenii
ENSCPOG00000001390	ATXN2	95	90.778	ENSOPRG00000014599	ATXN2	100	90.000	Ochotona_princeps
ENSCPOG00000001390	ATXN2	96	95.175	ENSODEG00000010798	ATXN2	100	97.431	Octodon_degus
ENSCPOG00000001390	ATXN2	96	59.345	ENSONIG00000014521	atxn2	98	59.467	Oreochromis_niloticus
ENSCPOG00000001390	ATXN2	91	88.112	ENSOANG00000004796	ATXN2	100	90.574	Ornithorhynchus_anatinus
ENSCPOG00000001390	ATXN2	96	90.241	ENSOCUG00000002855	ATXN2	70	92.917	Oryctolagus_cuniculus
ENSCPOG00000001390	ATXN2	96	51.023	ENSORLG00000003606	atxn2	99	68.858	Oryzias_latipes
ENSCPOG00000001390	ATXN2	82	45.063	ENSOMEG00000020080	atxn2	97	68.987	Oryzias_melastigma
ENSCPOG00000001390	ATXN2	96	93.633	ENSOGAG00000000609	ATXN2	100	90.699	Otolemur_garnettii
ENSCPOG00000001390	ATXN2	96	93.524	ENSOARG00000018223	ATXN2	100	95.996	Ovis_aries
ENSCPOG00000001390	ATXN2	99	96.510	ENSPPAG00000028043	ATXN2	100	96.667	Pan_paniscus
ENSCPOG00000001390	ATXN2	96	95.297	ENSPPRG00000003573	ATXN2	99	93.546	Panthera_pardus
ENSCPOG00000001390	ATXN2	96	95.409	ENSPTIG00000021122	ATXN2	100	96.095	Panthera_tigris_altaica
ENSCPOG00000001390	ATXN2	99	96.619	ENSPTRG00000029540	ATXN2	100	96.762	Pan_troglodytes
ENSCPOG00000001390	ATXN2	99	96.183	ENSPANG00000017168	ATXN2	99	96.183	Papio_anubis
ENSCPOG00000001390	ATXN2	96	62.073	ENSPKIG00000023134	atxn2	96	62.419	Paramormyrops_kingsleyae
ENSCPOG00000001390	ATXN2	96	84.430	ENSPSIG00000002353	-	100	86.766	Pelodiscus_sinensis
ENSCPOG00000001390	ATXN2	96	54.469	ENSPMGG00000005074	atxn2	100	57.053	Periophthalmus_magnuspinnatus
ENSCPOG00000001390	ATXN2	100	93.427	ENSPEMG00000015340	Atxn2	100	93.427	Peromyscus_maniculatus_bairdii
ENSCPOG00000001390	ATXN2	57	52.747	ENSPMAG00000004603	atxn2	73	51.761	Petromyzon_marinus
ENSCPOG00000001390	ATXN2	70	84.946	ENSPCIG00000006165	-	99	83.987	Phascolarctos_cinereus
ENSCPOG00000001390	ATXN2	86	64.605	ENSPFOG00000005857	atxn2	97	53.237	Poecilia_formosa
ENSCPOG00000001390	ATXN2	79	67.463	ENSPLAG00000015241	atxn2	97	69.775	Poecilia_latipinna
ENSCPOG00000001390	ATXN2	92	67.521	ENSPMEG00000016681	atxn2	97	69.132	Poecilia_mexicana
ENSCPOG00000001390	ATXN2	92	66.109	ENSPREG00000014825	atxn2	97	68.987	Poecilia_reticulata
ENSCPOG00000001390	ATXN2	96	93.963	ENSPPYG00000004963	ATXN2	95	92.010	Pongo_abelii
ENSCPOG00000001390	ATXN2	73	100.000	ENSPCAG00000004216	-	67	100.000	Procavia_capensis
ENSCPOG00000001390	ATXN2	99	96.074	ENSPCOG00000022031	ATXN2	99	96.074	Propithecus_coquereli
ENSCPOG00000001390	ATXN2	100	82.764	ENSPVAG00000013179	ATXN2	95	84.677	Pteropus_vampyrus
ENSCPOG00000001390	ATXN2	58	51.282	ENSPNYG00000016981	atxn2	98	51.125	Pundamilia_nyererei
ENSCPOG00000001390	ATXN2	96	90.461	ENSRNOG00000001256	Atxn2	99	93.023	Rattus_norvegicus
ENSCPOG00000001390	ATXN2	99	96.183	ENSRBIG00000039212	ATXN2	99	96.183	Rhinopithecus_bieti
ENSCPOG00000001390	ATXN2	100	93.975	ENSRROG00000031170	ATXN2	100	93.953	Rhinopithecus_roxellana
ENSCPOG00000001390	ATXN2	99	96.183	ENSSBOG00000031563	ATXN2	99	96.183	Saimiri_boliviensis_boliviensis
ENSCPOG00000001390	ATXN2	96	85.230	ENSSHAG00000007304	ATXN2	100	87.837	Sarcophilus_harrisii
ENSCPOG00000001390	ATXN2	99	59.236	ENSSFOG00015017229	atxn2	100	60.882	Scleropages_formosus
ENSCPOG00000001390	ATXN2	90	70.136	ENSSMAG00000004627	atxn2	97	69.937	Scophthalmus_maximus
ENSCPOG00000001390	ATXN2	96	44.941	ENSSDUG00000001223	atxn2	97	71.061	Seriola_dumerili
ENSCPOG00000001390	ATXN2	96	57.754	ENSSLDG00000019837	atxn2	100	58.379	Seriola_lalandi_dorsalis
ENSCPOG00000001390	ATXN2	88	95.973	ENSSARG00000006291	ATXN2	94	89.754	Sorex_araneus
ENSCPOG00000001390	ATXN2	96	84.766	ENSSPUG00000010317	ATXN2	92	87.067	Sphenodon_punctatus
ENSCPOG00000001390	ATXN2	96	57.384	ENSSPAG00000000377	atxn2	95	70.418	Stegastes_partitus
ENSCPOG00000001390	ATXN2	100	94.504	ENSSSCG00000009834	ATXN2	99	92.832	Sus_scrofa
ENSCPOG00000001390	ATXN2	96	78.947	ENSTGUG00000006497	ATXN2	100	72.376	Taeniopygia_guttata
ENSCPOG00000001390	ATXN2	96	56.904	ENSTRUG00000016801	atxn2	96	66.877	Takifugu_rubripes
ENSCPOG00000001390	ATXN2	84	100.000	ENSTBEG00000001985	ATXN2	89	97.692	Tupaia_belangeri
ENSCPOG00000001390	ATXN2	92	98.284	ENSTTRG00000000952	ATXN2	92	98.284	Tursiops_truncatus
ENSCPOG00000001390	ATXN2	96	94.072	ENSUAMG00000025295	ATXN2	98	94.076	Ursus_americanus
ENSCPOG00000001390	ATXN2	96	96.081	ENSUMAG00000007315	ATXN2	100	96.476	Ursus_maritimus
ENSCPOG00000001390	ATXN2	90	100.000	ENSVPAG00000005940	ATXN2	100	89.262	Vicugna_pacos
ENSCPOG00000001390	ATXN2	96	93.963	ENSVVUG00000016107	ATXN2	100	96.381	Vulpes_vulpes
ENSCPOG00000001390	ATXN2	96	75.679	ENSXETG00000020912	atxn2	100	78.411	Xenopus_tropicalis
ENSCPOG00000001390	ATXN2	56	53.676	ENSXCOG00000010001	atxn2	100	54.762	Xiphophorus_couchianus
ENSCPOG00000001390	ATXN2	92	67.094	ENSXMAG00000003481	atxn2	97	69.453	Xiphophorus_maculatus