EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001495 (Gene tree)
Gene ID: 100730442
Gene Symbol: -
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 13131 bases
Position: chrDS562908.1:10877121-10890251
Accession: 100730442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000001351	RRM_1	PF00076.22	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001515	-	864	XM_003467086	ENSCPOP00000001351	287 (aa)	XP_003467134	H0UWC1

Gene Model

Click here to download ENSCPOG00000001495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001495	-	99	68.662	ENSG00000278023	RDM1	97	78.947	Homo_sapiens
ENSCPOG00000001495	-	79	32.068	ENSAPOG00000021886	zgc:103564	69	35.484	Acanthochromis_polyacanthus
ENSCPOG00000001495	-	93	33.333	ENSAPEG00000008929	zgc:103564	98	32.963	Amphiprion_percula
ENSCPOG00000001495	-	85	51.004	ENSAPLG00000004384	RDM1	94	51.004	Anas_platyrhynchos
ENSCPOG00000001495	-	96	43.060	ENSACAG00000012989	-	100	43.060	Anolis_carolinensis
ENSCPOG00000001495	-	99	70.423	ENSANAG00000032752	RDM1	96	80.451	Aotus_nancymaae
ENSCPOG00000001495	-	99	66.667	ENSBTAG00000000030	RDM1	100	66.667	Bos_taurus
ENSCPOG00000001495	-	92	72.243	ENSCJAG00000015031	RDM1	96	81.955	Callithrix_jacchus
ENSCPOG00000001495	-	87	61.328	ENSCAFG00000015160	-	100	61.328	Canis_familiaris
ENSCPOG00000001495	-	96	67.986	ENSCHIG00000020607	RDM1	99	67.986	Capra_hircus
ENSCPOG00000001495	-	94	70.956	ENSCCAG00000035763	RDM1	96	81.203	Cebus_capucinus
ENSCPOG00000001495	-	99	70.423	ENSCATG00000044451	RDM1	96	81.203	Cercocebus_atys
ENSCPOG00000001495	-	92	65.789	ENSCSAG00000006209	RDM1	100	65.789	Chlorocebus_sabaeus
ENSCPOG00000001495	-	79	53.247	ENSCPBG00000009105	RDM1	96	51.575	Chrysemys_picta_bellii
ENSCPOG00000001495	-	99	69.366	ENSCANG00000041322	RDM1	100	69.366	Colobus_angolensis_palliatus
ENSCPOG00000001495	-	94	67.647	ENSCGRG00001015927	Rdm1	99	67.376	Cricetulus_griseus_chok1gshd
ENSCPOG00000001495	-	89	35.409	ENSCVAG00000001956	zgc:103564	96	34.559	Cyprinodon_variegatus
ENSCPOG00000001495	-	88	64.822	ENSDNOG00000045224	-	94	64.822	Dasypus_novemcinctus
ENSCPOG00000001495	-	67	67.010	ENSEASG00005010554	RDM1	69	67.010	Equus_asinus_asinus
ENSCPOG00000001495	-	88	70.980	ENSECAG00000022182	RDM1	91	70.980	Equus_caballus
ENSCPOG00000001495	-	87	59.921	ENSEEUG00000006127	RDM1	100	59.921	Erinaceus_europaeus
ENSCPOG00000001495	-	79	67.841	ENSFCAG00000043429	RDM1	96	75.188	Felis_catus
ENSCPOG00000001495	-	96	52.158	ENSGALG00000000243	RDM1	97	52.158	Gallus_gallus
ENSCPOG00000001495	-	76	52.703	ENSGAGG00000000293	-	80	50.388	Gopherus_agassizii
ENSCPOG00000001495	-	99	69.014	ENSGGOG00000010584	RDM1	96	78.947	Gorilla_gorilla
ENSCPOG00000001495	-	87	35.317	ENSHCOG00000002518	-	90	34.524	Hippocampus_comes
ENSCPOG00000001495	-	96	71.119	ENSSTOG00000022491	RDM1	98	71.119	Ictidomys_tridecemlineatus
ENSCPOG00000001495	-	99	65.614	ENSLAFG00000029300	RDM1	100	65.614	Loxodonta_africana
ENSCPOG00000001495	-	99	70.070	ENSMFAG00000032968	RDM1	96	81.203	Macaca_fascicularis
ENSCPOG00000001495	-	99	70.423	ENSMMUG00000006847	RDM1	100	70.423	Macaca_mulatta
ENSCPOG00000001495	-	99	70.070	ENSMNEG00000039977	RDM1	96	81.203	Macaca_nemestrina
ENSCPOG00000001495	-	99	70.070	ENSMLEG00000041158	RDM1	100	70.070	Mandrillus_leucophaeus
ENSCPOG00000001495	-	90	47.308	ENSMGAG00000008774	RDM1	96	50.407	Meleagris_gallopavo
ENSCPOG00000001495	-	98	68.440	ENSMAUG00000018559	Rdm1	99	68.440	Mesocricetus_auratus
ENSCPOG00000001495	-	99	69.718	ENSMICG00000038651	RDM1	100	69.718	Microcebus_murinus
ENSCPOG00000001495	-	95	65.455	ENSMOCG00000015095	Rdm1	99	65.091	Microtus_ochrogaster
ENSCPOG00000001495	-	96	54.710	ENSMODG00000011101	RDM1	100	54.710	Monodelphis_domestica
ENSCPOG00000001495	-	98	68.085	MGP_CAROLIEiJ_G0017226	Rdm1	99	68.085	Mus_caroli
ENSCPOG00000001495	-	98	67.730	ENSMUSG00000010362	Rdm1	99	67.730	Mus_musculus
ENSCPOG00000001495	-	98	67.021	MGP_PahariEiJ_G0018356	Rdm1	99	67.021	Mus_pahari
ENSCPOG00000001495	-	98	66.667	MGP_SPRETEiJ_G0018069	Rdm1	99	66.667	Mus_spretus
ENSCPOG00000001495	-	99	67.483	ENSMPUG00000008363	RDM1	100	66.084	Mustela_putorius_furo
ENSCPOG00000001495	-	99	70.070	ENSNLEG00000014173	RDM1	100	70.070	Nomascus_leucogenys
ENSCPOG00000001495	-	87	56.175	ENSMEUG00000015826	RDM1	100	55.777	Notamacropus_eugenii
ENSCPOG00000001495	-	90	67.568	ENSOCUG00000022704	RDM1	99	66.795	Oryctolagus_cuniculus
ENSCPOG00000001495	-	98	66.667	ENSOGAG00000011332	RDM1	99	66.667	Otolemur_garnettii
ENSCPOG00000001495	-	99	69.366	ENSPPAG00000029969	RDM1	100	69.366	Pan_paniscus
ENSCPOG00000001495	-	99	69.718	ENSPTRG00000009031	RDM1	96	79.699	Pan_troglodytes
ENSCPOG00000001495	-	99	70.423	ENSPANG00000022933	RDM1	96	81.203	Papio_anubis
ENSCPOG00000001495	-	94	68.382	ENSPEMG00000018985	Rdm1	98	68.592	Peromyscus_maniculatus_bairdii
ENSCPOG00000001495	-	99	69.014	ENSPPYG00000008198	RDM1	100	69.014	Pongo_abelii
ENSCPOG00000001495	-	99	66.549	ENSPCOG00000017995	RDM1	96	75.940	Propithecus_coquereli
ENSCPOG00000001495	-	87	68.924	ENSPVAG00000001116	RDM1	100	68.924	Pteropus_vampyrus
ENSCPOG00000001495	-	97	68.571	ENSRNOG00000020751	Rdm1	99	68.571	Rattus_norvegicus
ENSCPOG00000001495	-	99	69.366	ENSRBIG00000030000	RDM1	96	81.203	Rhinopithecus_bieti
ENSCPOG00000001495	-	99	69.718	ENSRROG00000035242	RDM1	100	69.718	Rhinopithecus_roxellana
ENSCPOG00000001495	-	96	55.797	ENSSHAG00000013584	RDM1	100	55.797	Sarcophilus_harrisii
ENSCPOG00000001495	-	90	50.958	ENSSPUG00000010941	RDM1	93	50.958	Sphenodon_punctatus
ENSCPOG00000001495	-	89	33.852	ENSSPAG00000011690	-	92	34.496	Stegastes_partitus
ENSCPOG00000001495	-	79	61.947	ENSSSCG00000017574	-	94	61.947	Sus_scrofa
ENSCPOG00000001495	-	84	54.321	ENSTBEG00000010030	RDM1	99	53.968	Tupaia_belangeri
ENSCPOG00000001495	-	99	67.958	ENSUAMG00000027279	RDM1	100	67.958	Ursus_americanus
ENSCPOG00000001495	-	96	68.953	ENSUMAG00000015423	RDM1	98	67.958	Ursus_maritimus