EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001739 (Gene tree)
Gene ID: 100731742
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 16331 bases
Position: chrDS562885.1:3146498-3162828
Accession: 100731742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023671	ARS2	PF04959.13	1.3e-90	1	1
ENSCPOP00000001570	ARS2	PF04959.13	2.3e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000043204	SRRT-201	5515	XM_003469924	ENSCPOP00000023671	877 (aa)	XP_003469972	A0A286XE19
ENSCPOT00000001760	SRRT-202	2625	-	ENSCPOP00000001570	874 (aa)	-	H0UWX2

Gene Model

Click here to download ENSCPOG00000001739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001739	SRRT	100	98.404	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSCPOG00000001739	SRRT	53	75.322	ENSAPOG00000002304	srrt	51	75.322	Acanthochromis_polyacanthus
ENSCPOG00000001739	SRRT	100	93.702	ENSAMEG00000014506	SRRT	100	93.702	Ailuropoda_melanoleuca
ENSCPOG00000001739	SRRT	79	75.107	ENSACIG00000015795	srrt	86	75.107	Amphilophus_citrinellus
ENSCPOG00000001739	SRRT	85	75.161	ENSAOCG00000009693	srrt	87	75.536	Amphiprion_ocellaris
ENSCPOG00000001739	SRRT	93	55.675	ENSAOCG00000009189	-	52	65.612	Amphiprion_ocellaris
ENSCPOG00000001739	SRRT	84	75.107	ENSAPEG00000003646	srrt	88	75.107	Amphiprion_percula
ENSCPOG00000001739	SRRT	93	55.675	ENSAPEG00000020016	-	52	65.612	Amphiprion_percula
ENSCPOG00000001739	SRRT	56	61.000	ENSATEG00000003652	-	85	64.167	Anabas_testudineus
ENSCPOG00000001739	SRRT	84	72.921	ENSATEG00000014425	srrt	86	73.774	Anabas_testudineus
ENSCPOG00000001739	SRRT	95	76.777	ENSACAG00000001014	SRRT	96	76.651	Anolis_carolinensis
ENSCPOG00000001739	SRRT	100	97.948	ENSANAG00000031718	SRRT	100	97.948	Aotus_nancymaae
ENSCPOG00000001739	SRRT	53	73.774	ENSACLG00000013156	srrt	50	73.820	Astatotilapia_calliptera
ENSCPOG00000001739	SRRT	93	52.774	ENSACLG00000009423	-	52	63.713	Astatotilapia_calliptera
ENSCPOG00000001739	SRRT	52	74.783	ENSAMXG00000016671	srrt	93	64.327	Astyanax_mexicanus
ENSCPOG00000001739	SRRT	100	97.035	ENSBTAG00000001134	SRRT	100	97.035	Bos_taurus
ENSCPOG00000001739	SRRT	60	48.438	WBGene00017085	E01A2.2	83	48.438	Caenorhabditis_elegans
ENSCPOG00000001739	SRRT	100	97.719	ENSCJAG00000014917	SRRT	100	97.719	Callithrix_jacchus
ENSCPOG00000001739	SRRT	100	98.062	ENSCAFG00000023538	SRRT	100	98.062	Canis_familiaris
ENSCPOG00000001739	SRRT	100	97.491	ENSCAFG00020013358	SRRT	100	97.491	Canis_lupus_dingo
ENSCPOG00000001739	SRRT	100	97.377	ENSCHIG00000010495	SRRT	100	97.377	Capra_hircus
ENSCPOG00000001739	SRRT	96	93.579	ENSTSYG00000036426	SRRT	99	93.907	Carlito_syrichta
ENSCPOG00000001739	SRRT	95	97.847	ENSCAPG00000013586	SRRT	100	97.847	Cavia_aperea
ENSCPOG00000001739	SRRT	100	97.948	ENSCCAG00000015877	SRRT	100	97.948	Cebus_capucinus
ENSCPOG00000001739	SRRT	100	97.719	ENSCATG00000036306	SRRT	100	97.719	Cercocebus_atys
ENSCPOG00000001739	SRRT	100	99.088	ENSCLAG00000007568	SRRT	100	99.088	Chinchilla_lanigera
ENSCPOG00000001739	SRRT	100	98.062	ENSCSAG00000017996	SRRT	100	98.062	Chlorocebus_sabaeus
ENSCPOG00000001739	SRRT	56	93.529	ENSCHOG00000007815	SRRT	67	94.083	Choloepus_hoffmanni
ENSCPOG00000001739	SRRT	75	81.609	ENSCPBG00000011553	SRRT	85	81.071	Chrysemys_picta_bellii
ENSCPOG00000001739	SRRT	100	42.591	ENSCING00000003506	-	77	51.440	Ciona_intestinalis
ENSCPOG00000001739	SRRT	100	40.236	ENSCSAVG00000008394	-	85	53.760	Ciona_savignyi
ENSCPOG00000001739	SRRT	100	97.377	ENSCANG00000034556	SRRT	100	97.377	Colobus_angolensis_palliatus
ENSCPOG00000001739	SRRT	100	96.701	ENSCGRG00001001594	Srrt	100	96.701	Cricetulus_griseus_chok1gshd
ENSCPOG00000001739	SRRT	100	86.689	ENSCGRG00000007292	Srrt	100	86.689	Cricetulus_griseus_crigri
ENSCPOG00000001739	SRRT	53	66.453	ENSCSEG00000017878	srrt	50	67.308	Cynoglossus_semilaevis
ENSCPOG00000001739	SRRT	93	53.019	ENSCSEG00000005233	-	54	62.447	Cynoglossus_semilaevis
ENSCPOG00000001739	SRRT	90	54.741	ENSCVAG00000017344	-	51	62.302	Cyprinodon_variegatus
ENSCPOG00000001739	SRRT	95	64.881	ENSCVAG00000019848	srrt	96	64.608	Cyprinodon_variegatus
ENSCPOG00000001739	SRRT	53	75.803	ENSDARG00000017762	srrt	96	65.982	Danio_rerio
ENSCPOG00000001739	SRRT	100	97.948	ENSDNOG00000003851	SRRT	100	97.948	Dasypus_novemcinctus
ENSCPOG00000001739	SRRT	100	95.677	ENSDORG00000005584	Srrt	100	95.677	Dipodomys_ordii
ENSCPOG00000001739	SRRT	96	45.840	FBgn0033062	Ars2	68	53.376	Drosophila_melanogaster
ENSCPOG00000001739	SRRT	86	93.870	ENSETEG00000016175	SRRT	82	93.870	Echinops_telfairi
ENSCPOG00000001739	SRRT	62	62.366	ENSEBUG00000008517	-	80	62.446	Eptatretus_burgeri
ENSCPOG00000001739	SRRT	100	97.834	ENSEASG00005016956	SRRT	100	97.834	Equus_asinus_asinus
ENSCPOG00000001739	SRRT	100	97.948	ENSECAG00000012292	SRRT	100	97.948	Equus_caballus
ENSCPOG00000001739	SRRT	85	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSCPOG00000001739	SRRT	93	55.136	ENSELUG00000021216	-	53	63.975	Esox_lucius
ENSCPOG00000001739	SRRT	100	98.176	ENSFCAG00000006855	SRRT	100	98.176	Felis_catus
ENSCPOG00000001739	SRRT	58	53.205	ENSFALG00000007524	-	84	70.455	Ficedula_albicollis
ENSCPOG00000001739	SRRT	100	94.185	ENSFDAG00000021347	SRRT	100	94.185	Fukomys_damarensis
ENSCPOG00000001739	SRRT	55	54.268	ENSFHEG00000004105	-	93	55.180	Fundulus_heteroclitus
ENSCPOG00000001739	SRRT	74	74.672	ENSFHEG00000002756	srrt	89	73.986	Fundulus_heteroclitus
ENSCPOG00000001739	SRRT	95	60.460	ENSGMOG00000018619	srrt	51	69.723	Gadus_morhua
ENSCPOG00000001739	SRRT	93	53.537	ENSGAFG00000020383	-	54	61.311	Gambusia_affinis
ENSCPOG00000001739	SRRT	53	73.820	ENSGAFG00000005423	srrt	51	73.820	Gambusia_affinis
ENSCPOG00000001739	SRRT	93	51.821	ENSGACG00000001100	-	53	61.216	Gasterosteus_aculeatus
ENSCPOG00000001739	SRRT	95	63.364	ENSGACG00000020387	srrt	51	73.932	Gasterosteus_aculeatus
ENSCPOG00000001739	SRRT	100	98.404	ENSGGOG00000001508	SRRT	99	98.404	Gorilla_gorilla
ENSCPOG00000001739	SRRT	53	73.987	ENSHBUG00000002942	srrt	50	74.034	Haplochromis_burtoni
ENSCPOG00000001739	SRRT	100	98.066	ENSHGLG00000008344	Srrt	100	98.066	Heterocephalus_glaber_female
ENSCPOG00000001739	SRRT	100	98.176	ENSHGLG00100018857	Srrt	100	98.176	Heterocephalus_glaber_male
ENSCPOG00000001739	SRRT	93	51.463	ENSHCOG00000008904	-	56	60.593	Hippocampus_comes
ENSCPOG00000001739	SRRT	98	62.558	ENSHCOG00000005403	srrt	56	71.030	Hippocampus_comes
ENSCPOG00000001739	SRRT	53	75.214	ENSIPUG00000021150	srrt	51	75.855	Ictalurus_punctatus
ENSCPOG00000001739	SRRT	100	97.605	ENSSTOG00000013776	SRRT	100	97.605	Ictidomys_tridecemlineatus
ENSCPOG00000001739	SRRT	100	95.439	ENSJJAG00000010446	Srrt	100	95.439	Jaculus_jaculus
ENSCPOG00000001739	SRRT	93	52.948	ENSKMAG00000008468	-	53	62.012	Kryptolebias_marmoratus
ENSCPOG00000001739	SRRT	95	64.167	ENSKMAG00000013599	srrt	96	63.389	Kryptolebias_marmoratus
ENSCPOG00000001739	SRRT	96	65.176	ENSLBEG00000016308	srrt	55	73.306	Labrus_bergylta
ENSCPOG00000001739	SRRT	95	63.377	ENSLACG00000001089	SRRT	96	64.630	Latimeria_chalumnae
ENSCPOG00000001739	SRRT	90	60.621	ENSLOCG00000013658	srrt	52	68.670	Lepisosteus_oculatus
ENSCPOG00000001739	SRRT	100	97.719	ENSLAFG00000007725	SRRT	100	97.719	Loxodonta_africana
ENSCPOG00000001739	SRRT	100	97.491	ENSMFAG00000033745	SRRT	100	97.491	Macaca_fascicularis
ENSCPOG00000001739	SRRT	100	98.062	ENSMMUG00000021255	SRRT	100	98.062	Macaca_mulatta
ENSCPOG00000001739	SRRT	100	98.062	ENSMNEG00000041864	SRRT	100	98.062	Macaca_nemestrina
ENSCPOG00000001739	SRRT	100	97.491	ENSMLEG00000029479	SRRT	100	97.491	Mandrillus_leucophaeus
ENSCPOG00000001739	SRRT	93	54.299	ENSMAMG00000010681	-	67	65.012	Mastacembelus_armatus
ENSCPOG00000001739	SRRT	53	72.747	ENSMAMG00000014311	srrt	51	73.820	Mastacembelus_armatus
ENSCPOG00000001739	SRRT	53	73.774	ENSMZEG00005016135	srrt	50	73.820	Maylandia_zebra
ENSCPOG00000001739	SRRT	93	52.656	ENSMZEG00005028002	-	52	63.713	Maylandia_zebra
ENSCPOG00000001739	SRRT	100	96.351	ENSMAUG00000011386	Srrt	100	96.351	Mesocricetus_auratus
ENSCPOG00000001739	SRRT	100	97.948	ENSMICG00000009471	SRRT	100	97.948	Microcebus_murinus
ENSCPOG00000001739	SRRT	100	96.465	ENSMOCG00000001971	Srrt	100	96.465	Microtus_ochrogaster
ENSCPOG00000001739	SRRT	95	64.982	ENSMMOG00000016399	srrt	54	73.987	Mola_mola
ENSCPOG00000001739	SRRT	87	55.641	ENSMMOG00000011137	-	55	65.532	Mola_mola
ENSCPOG00000001739	SRRT	54	89.331	ENSMODG00000004862	SRRT	90	90.437	Monodelphis_domestica
ENSCPOG00000001739	SRRT	90	61.951	ENSMALG00000018604	srrt	84	70.815	Monopterus_albus
ENSCPOG00000001739	SRRT	59	49.806	ENSMALG00000005567	-	84	52.146	Monopterus_albus
ENSCPOG00000001739	SRRT	100	96.693	MGP_CAROLIEiJ_G0027870	Srrt	100	97.426	Mus_caroli
ENSCPOG00000001739	SRRT	100	96.693	ENSMUSG00000037364	Srrt	100	96.693	Mus_musculus
ENSCPOG00000001739	SRRT	100	96.693	MGP_PahariEiJ_G0024456	Srrt	100	97.059	Mus_pahari
ENSCPOG00000001739	SRRT	100	96.693	MGP_SPRETEiJ_G0028875	Srrt	100	97.426	Mus_spretus
ENSCPOG00000001739	SRRT	100	98.062	ENSMPUG00000015839	SRRT	100	98.062	Mustela_putorius_furo
ENSCPOG00000001739	SRRT	100	97.491	ENSMLUG00000009975	SRRT	100	97.491	Myotis_lucifugus
ENSCPOG00000001739	SRRT	100	97.035	ENSNGAG00000023715	Srrt	100	97.035	Nannospalax_galili
ENSCPOG00000001739	SRRT	53	72.318	ENSNBRG00000019100	srrt	52	72.318	Neolamprologus_brichardi
ENSCPOG00000001739	SRRT	95	87.260	ENSNLEG00000011987	SRRT	99	86.148	Nomascus_leucogenys
ENSCPOG00000001739	SRRT	98	74.160	ENSMEUG00000011941	SRRT	98	73.812	Notamacropus_eugenii
ENSCPOG00000001739	SRRT	63	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSCPOG00000001739	SRRT	100	97.605	ENSODEG00000016856	SRRT	100	97.605	Octodon_degus
ENSCPOG00000001739	SRRT	93	53.837	ENSONIG00000016080	-	52	62.947	Oreochromis_niloticus
ENSCPOG00000001739	SRRT	53	74.249	ENSONIG00000004242	srrt	52	74.034	Oreochromis_niloticus
ENSCPOG00000001739	SRRT	96	65.242	ENSORLG00000008120	srrt	52	73.605	Oryzias_latipes
ENSCPOG00000001739	SRRT	96	65.438	ENSORLG00020003058	srrt	96	63.605	Oryzias_latipes_hni
ENSCPOG00000001739	SRRT	96	65.513	ENSORLG00015008062	srrt	96	63.605	Oryzias_latipes_hsok
ENSCPOG00000001739	SRRT	93	56.136	ENSOMEG00000006963	-	53	64.195	Oryzias_melastigma
ENSCPOG00000001739	SRRT	96	65.545	ENSOMEG00000003155	srrt	89	73.233	Oryzias_melastigma
ENSCPOG00000001739	SRRT	100	98.290	ENSOGAG00000017242	SRRT	100	98.290	Otolemur_garnettii
ENSCPOG00000001739	SRRT	100	96.807	ENSOARG00000015645	SRRT	100	96.807	Ovis_aries
ENSCPOG00000001739	SRRT	100	97.719	ENSPPAG00000041090	SRRT	100	97.719	Pan_paniscus
ENSCPOG00000001739	SRRT	100	97.263	ENSPPRG00000009557	SRRT	100	97.263	Panthera_pardus
ENSCPOG00000001739	SRRT	100	98.062	ENSPTIG00000014355	SRRT	100	98.062	Panthera_tigris_altaica
ENSCPOG00000001739	SRRT	100	97.719	ENSPTRG00000019511	SRRT	100	97.719	Pan_troglodytes
ENSCPOG00000001739	SRRT	97	95.587	ENSPANG00000020763	SRRT	98	95.587	Papio_anubis
ENSCPOG00000001739	SRRT	96	69.285	ENSPKIG00000005434	srrt	54	78.632	Paramormyrops_kingsleyae
ENSCPOG00000001739	SRRT	94	66.986	ENSPKIG00000022212	-	96	65.607	Paramormyrops_kingsleyae
ENSCPOG00000001739	SRRT	95	79.053	ENSPSIG00000016311	SRRT	96	80.565	Pelodiscus_sinensis
ENSCPOG00000001739	SRRT	96	64.539	ENSPMGG00000002841	srrt	56	73.391	Periophthalmus_magnuspinnatus
ENSCPOG00000001739	SRRT	100	95.097	ENSPEMG00000010834	Srrt	100	95.097	Peromyscus_maniculatus_bairdii
ENSCPOG00000001739	SRRT	96	55.124	ENSPMAG00000009614	-	55	64.693	Petromyzon_marinus
ENSCPOG00000001739	SRRT	98	91.425	ENSPCIG00000000816	SRRT	98	91.889	Phascolarctos_cinereus
ENSCPOG00000001739	SRRT	93	53.285	ENSPFOG00000016554	-	54	61.099	Poecilia_formosa
ENSCPOG00000001739	SRRT	53	74.090	ENSPFOG00000005704	srrt	96	63.963	Poecilia_formosa
ENSCPOG00000001739	SRRT	95	63.741	ENSPLAG00000021992	srrt	96	64.220	Poecilia_latipinna
ENSCPOG00000001739	SRRT	93	53.098	ENSPLAG00000004526	-	55	60.759	Poecilia_latipinna
ENSCPOG00000001739	SRRT	79	73.662	ENSPMEG00000001182	srrt	96	63.573	Poecilia_mexicana
ENSCPOG00000001739	SRRT	90	52.447	ENSPMEG00000001520	-	53	60.045	Poecilia_mexicana
ENSCPOG00000001739	SRRT	95	64.576	ENSPREG00000022308	srrt	96	64.079	Poecilia_reticulata
ENSCPOG00000001739	SRRT	100	88.027	ENSPPYG00000017432	SRRT	100	88.027	Pongo_abelii
ENSCPOG00000001739	SRRT	100	93.446	ENSPCAG00000001621	SRRT	100	93.446	Procavia_capensis
ENSCPOG00000001739	SRRT	100	98.176	ENSPCOG00000025751	SRRT	100	98.176	Propithecus_coquereli
ENSCPOG00000001739	SRRT	78	90.162	ENSPVAG00000000834	SRRT	100	90.162	Pteropus_vampyrus
ENSCPOG00000001739	SRRT	53	73.774	ENSPNYG00000018710	srrt	52	73.820	Pundamilia_nyererei
ENSCPOG00000001739	SRRT	77	69.512	ENSPNAG00000010629	srrt	95	53.837	Pygocentrus_nattereri
ENSCPOG00000001739	SRRT	54	84.958	ENSRNOG00000048277	AABR07035787.1	93	84.958	Rattus_norvegicus
ENSCPOG00000001739	SRRT	100	98.062	ENSRBIG00000035718	SRRT	100	98.062	Rhinopithecus_bieti
ENSCPOG00000001739	SRRT	100	98.062	ENSRROG00000030622	SRRT	100	98.062	Rhinopithecus_roxellana
ENSCPOG00000001739	SRRT	100	97.948	ENSSBOG00000033570	SRRT	100	97.948	Saimiri_boliviensis_boliviensis
ENSCPOG00000001739	SRRT	72	87.598	ENSSHAG00000007349	-	100	87.441	Sarcophilus_harrisii
ENSCPOG00000001739	SRRT	94	69.042	ENSSFOG00015017293	srrt	96	68.535	Scleropages_formosus
ENSCPOG00000001739	SRRT	53	61.297	ENSSMAG00000018195	-	89	60.879	Scophthalmus_maximus
ENSCPOG00000001739	SRRT	95	64.252	ENSSMAG00000015342	srrt	96	63.953	Scophthalmus_maximus
ENSCPOG00000001739	SRRT	55	52.857	ENSSDUG00000002051	-	93	54.316	Seriola_dumerili
ENSCPOG00000001739	SRRT	53	74.034	ENSSDUG00000012049	srrt	53	74.893	Seriola_dumerili
ENSCPOG00000001739	SRRT	84	73.820	ENSSLDG00000017477	srrt	86	74.678	Seriola_lalandi_dorsalis
ENSCPOG00000001739	SRRT	53	74.200	ENSSPAG00000005665	srrt	51	74.200	Stegastes_partitus
ENSCPOG00000001739	SRRT	82	53.428	ENSSPAG00000018943	-	93	57.021	Stegastes_partitus
ENSCPOG00000001739	SRRT	95	94.351	ENSSSCG00000024789	SRRT	99	94.289	Sus_scrofa
ENSCPOG00000001739	SRRT	90	54.182	ENSTRUG00000000023	-	51	59.821	Takifugu_rubripes
ENSCPOG00000001739	SRRT	96	63.869	ENSTRUG00000016075	srrt	96	65.242	Takifugu_rubripes
ENSCPOG00000001739	SRRT	74	61.826	ENSTNIG00000011779	srrt	72	72.199	Tetraodon_nigroviridis
ENSCPOG00000001739	SRRT	93	50.469	ENSTNIG00000003111	-	53	61.522	Tetraodon_nigroviridis
ENSCPOG00000001739	SRRT	63	96.206	ENSTBEG00000005212	SRRT	62	96.206	Tupaia_belangeri
ENSCPOG00000001739	SRRT	100	97.263	ENSTTRG00000011104	SRRT	100	97.263	Tursiops_truncatus
ENSCPOG00000001739	SRRT	95	98.088	ENSUAMG00000027997	SRRT	98	98.088	Ursus_americanus
ENSCPOG00000001739	SRRT	100	98.176	ENSUMAG00000011295	SRRT	100	98.176	Ursus_maritimus
ENSCPOG00000001739	SRRT	100	98.062	ENSVVUG00000023572	SRRT	100	98.062	Vulpes_vulpes
ENSCPOG00000001739	SRRT	72	81.366	ENSXETG00000025124	srrt	84	75.751	Xenopus_tropicalis
ENSCPOG00000001739	SRRT	53	50.855	ENSXCOG00000013105	-	90	51.386	Xiphophorus_couchianus
ENSCPOG00000001739	SRRT	80	74.464	ENSXMAG00000007627	srrt	87	74.090	Xiphophorus_maculatus
ENSCPOG00000001739	SRRT	93	53.471	ENSXMAG00000002090	-	54	61.359	Xiphophorus_maculatus