EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000001761 (Gene tree)
Gene ID: 100732874
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 81014 bases
Position: chrDS562865.1:33711259-33792272
Accession: 100732874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000001592	HRDC	PF00570.23	2.7e-12	1	1
ENSCPOP00000001592	BDHCT	PF08072.11	1.5e-20	1	1
ENSCPOP00000001592	DEAD	PF00270.29	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001782	BLM-201	4966	XM_003475754	ENSCPOP00000001592	1405 (aa)	XP_003475802	H0UWZ2

Gene Model

Click here to download ENSCPOG00000001761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001761	BLM	100	78.255	ENSG00000197299	BLM	100	79.042	Homo_sapiens
ENSCPOG00000001761	BLM	59	61.621	ENSAPOG00000017966	blm	62	61.621	Acanthochromis_polyacanthus
ENSCPOG00000001761	BLM	100	76.284	ENSAMEG00000013843	BLM	100	76.284	Ailuropoda_melanoleuca
ENSCPOG00000001761	BLM	67	62.053	ENSACIG00000023762	blm	67	62.515	Amphilophus_citrinellus
ENSCPOG00000001761	BLM	81	57.251	ENSAPLG00000006878	BLM	98	56.904	Anas_platyrhynchos
ENSCPOG00000001761	BLM	74	56.694	ENSACAG00000014275	BLM	99	48.772	Anolis_carolinensis
ENSCPOG00000001761	BLM	100	78.295	ENSANAG00000038415	BLM	100	78.224	Aotus_nancymaae
ENSCPOG00000001761	BLM	88	62.799	ENSACLG00000020354	blm	62	62.888	Astatotilapia_calliptera
ENSCPOG00000001761	BLM	84	65.206	ENSAMXG00000016970	blm	87	62.266	Astyanax_mexicanus
ENSCPOG00000001761	BLM	93	81.250	ENSBTAG00000020301	BLM	100	81.250	Bos_taurus
ENSCPOG00000001761	BLM	100	78.013	ENSCJAG00000009803	BLM	100	77.942	Callithrix_jacchus
ENSCPOG00000001761	BLM	100	76.093	ENSCAFG00000012385	BLM	100	76.093	Canis_familiaris
ENSCPOG00000001761	BLM	100	75.952	ENSCAFG00020016111	BLM	93	89.452	Canis_lupus_dingo
ENSCPOG00000001761	BLM	100	75.563	ENSCHIG00000010329	BLM	100	80.263	Capra_hircus
ENSCPOG00000001761	BLM	100	77.660	ENSTSYG00000012368	BLM	100	79.042	Carlito_syrichta
ENSCPOG00000001761	BLM	86	98.333	ENSCAPG00000017976	BLM	99	98.333	Cavia_aperea
ENSCPOG00000001761	BLM	100	77.237	ENSCCAG00000023069	BLM	100	77.237	Cebus_capucinus
ENSCPOG00000001761	BLM	100	78.169	ENSCATG00000040609	BLM	100	78.239	Cercocebus_atys
ENSCPOG00000001761	BLM	100	88.219	ENSCLAG00000012111	BLM	100	88.219	Chinchilla_lanigera
ENSCPOG00000001761	BLM	100	77.715	ENSCSAG00000017040	BLM	100	77.786	Chlorocebus_sabaeus
ENSCPOG00000001761	BLM	91	75.840	ENSCHOG00000006255	BLM	93	75.840	Choloepus_hoffmanni
ENSCPOG00000001761	BLM	89	54.718	ENSCPBG00000025000	BLM	97	71.858	Chrysemys_picta_bellii
ENSCPOG00000001761	BLM	88	67.358	ENSCANG00000034808	BLM	100	67.917	Colobus_angolensis_palliatus
ENSCPOG00000001761	BLM	100	75.105	ENSCGRG00001024897	Blm	100	75.264	Cricetulus_griseus_chok1gshd
ENSCPOG00000001761	BLM	67	69.102	ENSCGRG00000016261	Blm	97	69.343	Cricetulus_griseus_crigri
ENSCPOG00000001761	BLM	56	64.076	ENSCSEG00000013483	blm	60	64.541	Cynoglossus_semilaevis
ENSCPOG00000001761	BLM	99	46.780	ENSDARG00000077089	blm	99	46.911	Danio_rerio
ENSCPOG00000001761	BLM	99	74.108	ENSDNOG00000010159	BLM	99	74.108	Dasypus_novemcinctus
ENSCPOG00000001761	BLM	74	80.287	ENSDORG00000011033	Blm	100	80.478	Dipodomys_ordii
ENSCPOG00000001761	BLM	54	41.085	FBgn0002906	Blm	57	38.839	Drosophila_melanogaster
ENSCPOG00000001761	BLM	81	81.818	ENSETEG00000015019	BLM	82	81.818	Echinops_telfairi
ENSCPOG00000001761	BLM	100	74.612	ENSEASG00005006727	BLM	100	74.894	Equus_asinus_asinus
ENSCPOG00000001761	BLM	100	76.590	ENSECAG00000011405	BLM	100	76.869	Equus_caballus
ENSCPOG00000001761	BLM	98	70.788	ENSEEUG00000001434	BLM	98	70.788	Erinaceus_europaeus
ENSCPOG00000001761	BLM	59	64.371	ENSELUG00000019098	blm	55	65.789	Esox_lucius
ENSCPOG00000001761	BLM	100	76.039	ENSFCAG00000006087	BLM	100	76.647	Felis_catus
ENSCPOG00000001761	BLM	76	57.064	ENSFALG00000010981	BLM	89	55.139	Ficedula_albicollis
ENSCPOG00000001761	BLM	100	77.676	ENSFDAG00000012658	BLM	100	80.070	Fukomys_damarensis
ENSCPOG00000001761	BLM	59	61.429	ENSFHEG00000002553	blm	60	61.429	Fundulus_heteroclitus
ENSCPOG00000001761	BLM	100	44.616	ENSGMOG00000016431	blm	90	61.069	Gadus_morhua
ENSCPOG00000001761	BLM	83	54.671	ENSGALG00000008256	BLM	99	49.423	Gallus_gallus
ENSCPOG00000001761	BLM	56	64.403	ENSGACG00000010863	blm	100	73.396	Gasterosteus_aculeatus
ENSCPOG00000001761	BLM	88	51.543	ENSGAGG00000005383	BLM	96	71.684	Gopherus_agassizii
ENSCPOG00000001761	BLM	100	78.138	ENSGGOG00000007710	BLM	100	79.042	Gorilla_gorilla
ENSCPOG00000001761	BLM	88	62.919	ENSHBUG00000015943	blm	63	62.932	Haplochromis_burtoni
ENSCPOG00000001761	BLM	100	87.225	ENSHGLG00000013231	BLM	99	87.154	Heterocephalus_glaber_female
ENSCPOG00000001761	BLM	73	54.159	ENSHCOG00000011455	blm	83	62.143	Hippocampus_comes
ENSCPOG00000001761	BLM	74	54.962	ENSIPUG00000000529	blm	85	54.962	Ictalurus_punctatus
ENSCPOG00000001761	BLM	100	77.372	ENSSTOG00000005000	BLM	100	77.934	Ictidomys_tridecemlineatus
ENSCPOG00000001761	BLM	66	80.667	ENSJJAG00000016322	Blm	94	81.487	Jaculus_jaculus
ENSCPOG00000001761	BLM	66	60.855	ENSKMAG00000016608	blm	63	62.994	Kryptolebias_marmoratus
ENSCPOG00000001761	BLM	79	52.773	ENSLOCG00000014302	blm	80	53.043	Lepisosteus_oculatus
ENSCPOG00000001761	BLM	100	78.169	ENSMFAG00000042982	BLM	100	78.169	Macaca_fascicularis
ENSCPOG00000001761	BLM	100	78.239	ENSMMUG00000019526	BLM	100	78.239	Macaca_mulatta
ENSCPOG00000001761	BLM	98	75.902	ENSMNEG00000031251	BLM	92	85.714	Macaca_nemestrina
ENSCPOG00000001761	BLM	100	75.845	ENSMLEG00000032934	BLM	100	75.915	Mandrillus_leucophaeus
ENSCPOG00000001761	BLM	59	62.976	ENSMAMG00000008726	blm	60	63.496	Mastacembelus_armatus
ENSCPOG00000001761	BLM	88	62.560	ENSMZEG00005022323	blm	72	62.560	Maylandia_zebra
ENSCPOG00000001761	BLM	100	75.368	ENSMAUG00000008953	Blm	99	75.439	Mesocricetus_auratus
ENSCPOG00000001761	BLM	100	77.567	ENSMICG00000034442	BLM	100	77.918	Microcebus_murinus
ENSCPOG00000001761	BLM	100	75.884	ENSMOCG00000016367	Blm	99	75.672	Microtus_ochrogaster
ENSCPOG00000001761	BLM	99	61.775	ENSMODG00000019449	BLM	99	61.775	Monodelphis_domestica
ENSCPOG00000001761	BLM	68	63.002	ENSMALG00000007323	blm	67	63.002	Monopterus_albus
ENSCPOG00000001761	BLM	100	72.899	MGP_CAROLIEiJ_G0029907	Blm	100	73.179	Mus_caroli
ENSCPOG00000001761	BLM	100	73.449	ENSMUSG00000030528	Blm	100	73.728	Mus_musculus
ENSCPOG00000001761	BLM	100	73.791	MGP_PahariEiJ_G0013129	Blm	100	73.931	Mus_pahari
ENSCPOG00000001761	BLM	100	73.743	MGP_SPRETEiJ_G0031009	Blm	100	74.090	Mus_spretus
ENSCPOG00000001761	BLM	84	73.217	ENSMPUG00000015657	BLM	99	73.217	Mustela_putorius_furo
ENSCPOG00000001761	BLM	100	73.371	ENSMLUG00000014697	BLM	100	73.721	Myotis_lucifugus
ENSCPOG00000001761	BLM	100	76.566	ENSNGAG00000001275	Blm	100	76.284	Nannospalax_galili
ENSCPOG00000001761	BLM	88	62.156	ENSNBRG00000019702	blm	69	62.156	Neolamprologus_brichardi
ENSCPOG00000001761	BLM	100	76.777	ENSNLEG00000012087	BLM	100	79.330	Nomascus_leucogenys
ENSCPOG00000001761	BLM	99	59.622	ENSMEUG00000007253	BLM	99	59.622	Notamacropus_eugenii
ENSCPOG00000001761	BLM	96	85.221	ENSOPRG00000011667	BLM	95	85.221	Ochotona_princeps
ENSCPOG00000001761	BLM	74	84.913	ENSODEG00000015373	BLM	100	84.913	Octodon_degus
ENSCPOG00000001761	BLM	71	62.175	ENSONIG00000015193	blm	66	62.411	Oreochromis_niloticus
ENSCPOG00000001761	BLM	54	81.274	ENSOANG00000009316	-	99	81.274	Ornithorhynchus_anatinus
ENSCPOG00000001761	BLM	99	72.555	ENSOCUG00000013969	BLM	99	72.555	Oryctolagus_cuniculus
ENSCPOG00000001761	BLM	99	46.217	ENSORLG00000008110	blm	99	46.426	Oryzias_latipes
ENSCPOG00000001761	BLM	99	46.353	ENSORLG00020004812	blm	99	46.494	Oryzias_latipes_hni
ENSCPOG00000001761	BLM	99	46.421	ENSORLG00015018640	blm	99	46.585	Oryzias_latipes_hsok
ENSCPOG00000001761	BLM	68	62.757	ENSOMEG00000023545	blm	68	62.681	Oryzias_melastigma
ENSCPOG00000001761	BLM	100	72.676	ENSOGAG00000005708	BLM	100	72.676	Otolemur_garnettii
ENSCPOG00000001761	BLM	100	75.157	ENSOARG00000012875	BLM	100	75.087	Ovis_aries
ENSCPOG00000001761	BLM	100	77.465	ENSPPAG00000032173	BLM	100	78.443	Pan_paniscus
ENSCPOG00000001761	BLM	100	76.039	ENSPPRG00000002471	BLM	100	76.647	Panthera_pardus
ENSCPOG00000001761	BLM	100	75.721	ENSPTIG00000016168	BLM	100	75.755	Panthera_tigris_altaica
ENSCPOG00000001761	BLM	100	77.324	ENSPTRG00000007460	BLM	100	78.443	Pan_troglodytes
ENSCPOG00000001761	BLM	100	78.380	ENSPANG00000018572	BLM	100	78.451	Papio_anubis
ENSCPOG00000001761	BLM	88	63.507	ENSPKIG00000008954	blm	86	63.571	Paramormyrops_kingsleyae
ENSCPOG00000001761	BLM	52	65.984	ENSPMGG00000006629	blm	82	65.246	Periophthalmus_magnuspinnatus
ENSCPOG00000001761	BLM	100	74.631	ENSPEMG00000017348	Blm	100	74.772	Peromyscus_maniculatus_bairdii
ENSCPOG00000001761	BLM	51	57.880	ENSPMAG00000000445	blm	98	58.038	Petromyzon_marinus
ENSCPOG00000001761	BLM	99	61.266	ENSPCIG00000006609	BLM	99	61.266	Phascolarctos_cinereus
ENSCPOG00000001761	BLM	59	61.198	ENSPFOG00000005059	blm	83	49.551	Poecilia_formosa
ENSCPOG00000001761	BLM	59	61.290	ENSPLAG00000017344	blm	83	49.633	Poecilia_latipinna
ENSCPOG00000001761	BLM	59	61.198	ENSPMEG00000000321	blm	83	49.551	Poecilia_mexicana
ENSCPOG00000001761	BLM	59	61.501	ENSPREG00000007715	blm	59	61.501	Poecilia_reticulata
ENSCPOG00000001761	BLM	100	76.073	ENSPPYG00000006784	BLM	100	75.932	Pongo_abelii
ENSCPOG00000001761	BLM	73	87.097	ENSPCAG00000008960	BLM	73	87.097	Procavia_capensis
ENSCPOG00000001761	BLM	100	72.293	ENSPCOG00000000439	BLM	100	79.641	Propithecus_coquereli
ENSCPOG00000001761	BLM	81	93.871	ENSPVAG00000011642	BLM	83	93.871	Pteropus_vampyrus
ENSCPOG00000001761	BLM	88	50.538	ENSPNYG00000010956	blm	67	53.488	Pundamilia_nyererei
ENSCPOG00000001761	BLM	60	61.761	ENSPNAG00000011714	blm	68	62.750	Pygocentrus_nattereri
ENSCPOG00000001761	BLM	100	72.453	ENSRNOG00000011213	Blm	100	72.593	Rattus_norvegicus
ENSCPOG00000001761	BLM	100	76.657	ENSRBIG00000029656	BLM	100	82.550	Rhinopithecus_bieti
ENSCPOG00000001761	BLM	100	77.958	ENSRROG00000037871	BLM	100	78.028	Rhinopithecus_roxellana
ENSCPOG00000001761	BLM	91	76.647	ENSSBOG00000030957	BLM	100	76.647	Saimiri_boliviensis_boliviensis
ENSCPOG00000001761	BLM	99	61.869	ENSSHAG00000007988	BLM	99	61.704	Sarcophilus_harrisii
ENSCPOG00000001761	BLM	55	63.138	ENSSFOG00015015462	blm	64	63.138	Scleropages_formosus
ENSCPOG00000001761	BLM	59	61.649	ENSSMAG00000001120	blm	81	50.475	Scophthalmus_maximus
ENSCPOG00000001761	BLM	59	62.574	ENSSDUG00000010955	blm	79	51.471	Seriola_dumerili
ENSCPOG00000001761	BLM	59	62.278	ENSSLDG00000000634	blm	79	52.178	Seriola_lalandi_dorsalis
ENSCPOG00000001761	BLM	89	72.877	ENSSARG00000006398	BLM	94	72.877	Sorex_araneus
ENSCPOG00000001761	BLM	82	54.945	ENSSPUG00000000013	BLM	99	54.910	Sphenodon_punctatus
ENSCPOG00000001761	BLM	59	61.950	ENSSPAG00000013999	blm	59	62.069	Stegastes_partitus
ENSCPOG00000001761	BLM	100	75.506	ENSSSCG00000001816	BLM	99	75.925	Sus_scrofa
ENSCPOG00000001761	BLM	79	51.161	ENSTGUG00000009959	-	99	51.075	Taeniopygia_guttata
ENSCPOG00000001761	BLM	79	51.006	ENSTRUG00000019860	blm	71	61.871	Takifugu_rubripes
ENSCPOG00000001761	BLM	79	81.132	ENSTBEG00000006706	BLM	80	81.132	Tupaia_belangeri
ENSCPOG00000001761	BLM	100	75.915	ENSTTRG00000016386	BLM	100	76.268	Tursiops_truncatus
ENSCPOG00000001761	BLM	100	76.462	ENSUMAG00000009105	BLM	97	89.617	Ursus_maritimus
ENSCPOG00000001761	BLM	99	73.803	ENSVPAG00000000085	BLM	99	74.366	Vicugna_pacos
ENSCPOG00000001761	BLM	100	75.332	ENSVVUG00000006402	BLM	100	79.470	Vulpes_vulpes
ENSCPOG00000001761	BLM	99	50.846	ENSXETG00000007847	blm	54	71.903	Xenopus_tropicalis
ENSCPOG00000001761	BLM	59	58.234	ENSXCOG00000020227	blm	81	47.313	Xiphophorus_couchianus
ENSCPOG00000001761	BLM	59	61.078	ENSXMAG00000002951	blm	83	49.106	Xiphophorus_maculatus