EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000001925 (Gene tree)
Gene ID: 100718774
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 19572 bases
Position: chrDS562880.1:7890861-7910432
Accession: 100718774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030537	RRM_1	PF00076.22	2e-27	1	2
ENSCPOP00000030537	RRM_1	PF00076.22	2e-27	2	2
ENSCPOP00000001737	RRM_1	PF00076.22	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000001946	TRNAU1AP-202	744	-	ENSCPOP00000001737	247 (aa)	-	H0UXC4
ENSCPOT00000033815	TRNAU1AP-201	5266	XM_003471265	ENSCPOP00000030537	287 (aa)	XP_003471313	A0A286XY85

Gene Model

Click here to download ENSCPOG00000001925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000001925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000001925	TRNAU1AP	78	30.198	ENSCPOG00000008327	TIA1	68	31.285

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSG00000180098	TRNAU1AP	100	99.303	Homo_sapiens
ENSCPOG00000001925	TRNAU1AP	98	58.746	ENSAPOG00000007148	TRNAU1AP	98	58.746	Acanthochromis_polyacanthus
ENSCPOG00000001925	TRNAU1AP	100	98.258	ENSAMEG00000011367	TRNAU1AP	100	98.258	Ailuropoda_melanoleuca
ENSCPOG00000001925	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSCPOG00000001925	TRNAU1AP	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSCPOG00000001925	TRNAU1AP	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSCPOG00000001925	TRNAU1AP	96	59.732	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSCPOG00000001925	TRNAU1AP	94	94.074	ENSAPLG00000002606	TRNAU1AP	99	94.074	Anas_platyrhynchos
ENSCPOG00000001925	TRNAU1AP	99	76.573	ENSACAG00000003995	-	99	76.573	Anolis_carolinensis
ENSCPOG00000001925	TRNAU1AP	67	51.562	ENSACAG00000004205	-	73	51.562	Anolis_carolinensis
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSANAG00000018976	TRNAU1AP	100	99.303	Aotus_nancymaae
ENSCPOG00000001925	TRNAU1AP	98	59.000	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSCPOG00000001925	TRNAU1AP	96	57.500	ENSAMXG00000013750	trnau1apa	91	57.500	Astyanax_mexicanus
ENSCPOG00000001925	TRNAU1AP	94	65.556	ENSAMXG00000029240	-	96	65.556	Astyanax_mexicanus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSBTAG00000010393	TRNAU1AP	100	98.955	Bos_taurus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSCJAG00000009717	TRNAU1AP	100	99.303	Callithrix_jacchus
ENSCPOG00000001925	TRNAU1AP	100	99.652	ENSCAFG00000011735	TRNAU1AP	100	99.652	Canis_familiaris
ENSCPOG00000001925	TRNAU1AP	100	99.652	ENSCAFG00020023584	TRNAU1AP	100	99.652	Canis_lupus_dingo
ENSCPOG00000001925	TRNAU1AP	100	98.785	ENSCHIG00000023215	TRNAU1AP	100	98.785	Capra_hircus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSTSYG00000003506	TRNAU1AP	100	98.955	Carlito_syrichta
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSCCAG00000037506	TRNAU1AP	100	99.303	Cebus_capucinus
ENSCPOG00000001925	TRNAU1AP	100	99.190	ENSCATG00000044617	TRNAU1AP	100	99.190	Cercocebus_atys
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSCLAG00000008223	TRNAU1AP	100	99.303	Chinchilla_lanigera
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSCSAG00000001014	TRNAU1AP	100	98.955	Chlorocebus_sabaeus
ENSCPOG00000001925	TRNAU1AP	95	94.161	ENSCPBG00000000121	TRNAU1AP	100	94.161	Chrysemys_picta_bellii
ENSCPOG00000001925	TRNAU1AP	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSCPOG00000001925	TRNAU1AP	100	87.456	ENSCANG00000041949	TRNAU1AP	100	98.870	Colobus_angolensis_palliatus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSCGRG00001004713	Trnau1ap	100	98.955	Cricetulus_griseus_chok1gshd
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSCGRG00000014532	Trnau1ap	100	98.955	Cricetulus_griseus_crigri
ENSCPOG00000001925	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	94	58.607	Cynoglossus_semilaevis
ENSCPOG00000001925	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSCPOG00000001925	TRNAU1AP	96	53.357	ENSDARG00000101323	trnau1apa	89	51.761	Danio_rerio
ENSCPOG00000001925	TRNAU1AP	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSDNOG00000033009	TRNAU1AP	100	98.955	Dasypus_novemcinctus
ENSCPOG00000001925	TRNAU1AP	99	90.909	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSCPOG00000001925	TRNAU1AP	96	51.493	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSCPOG00000001925	TRNAU1AP	85	94.694	ENSETEG00000012594	TRNAU1AP	100	94.694	Echinops_telfairi
ENSCPOG00000001925	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSEASG00005010062	TRNAU1AP	100	99.303	Equus_asinus_asinus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSECAG00000012980	TRNAU1AP	100	99.303	Equus_caballus
ENSCPOG00000001925	TRNAU1AP	96	63.415	ENSELUG00000017686	trnau1apa	94	63.066	Esox_lucius
ENSCPOG00000001925	TRNAU1AP	96	70.526	ENSELUG00000022790	-	94	53.390	Esox_lucius
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSFCAG00000013401	TRNAU1AP	100	99.303	Felis_catus
ENSCPOG00000001925	TRNAU1AP	95	93.796	ENSFALG00000001371	TRNAU1AP	100	93.796	Ficedula_albicollis
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSFDAG00000018599	TRNAU1AP	100	98.606	Fukomys_damarensis
ENSCPOG00000001925	TRNAU1AP	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSCPOG00000001925	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSCPOG00000001925	TRNAU1AP	68	48.826	ENSGALG00000012721	C2H6orf52	95	44.402	Gallus_gallus
ENSCPOG00000001925	TRNAU1AP	100	93.031	ENSGALG00000001310	-	100	93.031	Gallus_gallus
ENSCPOG00000001925	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSCPOG00000001925	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSCPOG00000001925	TRNAU1AP	95	94.526	ENSGAGG00000004940	TRNAU1AP	100	94.526	Gopherus_agassizii
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSGGOG00000003511	TRNAU1AP	100	99.303	Gorilla_gorilla
ENSCPOG00000001925	TRNAU1AP	98	58.033	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSHGLG00000010380	TRNAU1AP	100	98.606	Heterocephalus_glaber_female
ENSCPOG00000001925	TRNAU1AP	100	96.167	ENSHGLG00100012699	TRNAU1AP	100	96.167	Heterocephalus_glaber_male
ENSCPOG00000001925	TRNAU1AP	99	57.096	ENSHCOG00000014770	trnau1apa	97	66.429	Hippocampus_comes
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSSTOG00000000079	TRNAU1AP	100	99.303	Ictidomys_tridecemlineatus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSJJAG00000010128	Trnau1ap	100	98.955	Jaculus_jaculus
ENSCPOG00000001925	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSCPOG00000001925	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSCPOG00000001925	TRNAU1AP	99	72.632	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSCPOG00000001925	TRNAU1AP	99	72.378	ENSLOCG00000004041	trnau1apa	99	71.329	Lepisosteus_oculatus
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSLAFG00000007628	TRNAU1AP	100	98.955	Loxodonta_africana
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSMFAG00000043751	TRNAU1AP	100	98.955	Macaca_fascicularis
ENSCPOG00000001925	TRNAU1AP	100	99.190	ENSMMUG00000006561	TRNAU1AP	100	99.190	Macaca_mulatta
ENSCPOG00000001925	TRNAU1AP	100	99.190	ENSMNEG00000044201	TRNAU1AP	100	99.190	Macaca_nemestrina
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSMLEG00000015649	TRNAU1AP	100	98.955	Mandrillus_leucophaeus
ENSCPOG00000001925	TRNAU1AP	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSCPOG00000001925	TRNAU1AP	98	59.000	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSCPOG00000001925	TRNAU1AP	97	92.806	ENSMGAG00000002105	TRNAU1AP	100	92.806	Meleagris_gallopavo
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSMICG00000008386	TRNAU1AP	100	98.955	Microcebus_murinus
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSMOCG00000011189	Trnau1ap	100	98.606	Microtus_ochrogaster
ENSCPOG00000001925	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSCPOG00000001925	TRNAU1AP	100	95.470	ENSMODG00000010927	TRNAU1AP	100	95.470	Monodelphis_domestica
ENSCPOG00000001925	TRNAU1AP	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSCPOG00000001925	TRNAU1AP	100	98.785	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSCPOG00000001925	TRNAU1AP	100	98.785	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSCPOG00000001925	TRNAU1AP	100	99.190	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSCPOG00000001925	TRNAU1AP	100	98.381	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSMPUG00000015511	TRNAU1AP	100	98.606	Mustela_putorius_furo
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSMLUG00000012586	TRNAU1AP	100	98.955	Myotis_lucifugus
ENSCPOG00000001925	TRNAU1AP	100	97.571	ENSNGAG00000015881	Trnau1ap	100	97.571	Nannospalax_galili
ENSCPOG00000001925	TRNAU1AP	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSNLEG00000009822	TRNAU1AP	100	99.303	Nomascus_leucogenys
ENSCPOG00000001925	TRNAU1AP	97	94.245	ENSMEUG00000006117	TRNAU1AP	100	94.245	Notamacropus_eugenii
ENSCPOG00000001925	TRNAU1AP	82	96.364	ENSOPRG00000007084	-	69	96.364	Ochotona_princeps
ENSCPOG00000001925	TRNAU1AP	100	99.652	ENSODEG00000002970	TRNAU1AP	100	99.652	Octodon_degus
ENSCPOG00000001925	TRNAU1AP	80	59.671	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSCPOG00000001925	TRNAU1AP	99	75.175	ENSOANG00000005325	-	99	75.175	Ornithorhynchus_anatinus
ENSCPOG00000001925	TRNAU1AP	100	77.083	ENSOCUG00000002353	-	100	77.083	Oryctolagus_cuniculus
ENSCPOG00000001925	TRNAU1AP	100	97.213	ENSOCUG00000011704	-	100	97.213	Oryctolagus_cuniculus
ENSCPOG00000001925	TRNAU1AP	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSCPOG00000001925	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSCPOG00000001925	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSCPOG00000001925	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSCPOG00000001925	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSOGAG00000002274	TRNAU1AP	100	98.955	Otolemur_garnettii
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSOARG00000002843	TRNAU1AP	100	98.606	Ovis_aries
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSPPAG00000033927	TRNAU1AP	100	99.303	Pan_paniscus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSPPRG00000004416	TRNAU1AP	100	99.303	Panthera_pardus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSPTIG00000016677	TRNAU1AP	100	99.303	Panthera_tigris_altaica
ENSCPOG00000001925	TRNAU1AP	93	80.443	ENSPTRG00000000434	-	97	78.967	Pan_troglodytes
ENSCPOG00000001925	TRNAU1AP	100	99.190	ENSPANG00000016019	TRNAU1AP	100	99.190	Papio_anubis
ENSCPOG00000001925	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSCPOG00000001925	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSCPOG00000001925	TRNAU1AP	95	94.526	ENSPSIG00000006864	TRNAU1AP	100	94.526	Pelodiscus_sinensis
ENSCPOG00000001925	TRNAU1AP	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSPEMG00000007877	Trnau1ap	100	98.606	Peromyscus_maniculatus_bairdii
ENSCPOG00000001925	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSCPOG00000001925	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSCPOG00000001925	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSCPOG00000001925	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSCPOG00000001925	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSCPOG00000001925	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSCPOG00000001925	TRNAU1AP	100	90.283	ENSPPYG00000001639	-	100	90.283	Pongo_abelii
ENSCPOG00000001925	TRNAU1AP	98	94.628	ENSPCOG00000023470	-	100	94.628	Propithecus_coquereli
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSPCOG00000027712	-	100	98.955	Propithecus_coquereli
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSPVAG00000017214	TRNAU1AP	100	99.303	Pteropus_vampyrus
ENSCPOG00000001925	TRNAU1AP	98	58.033	ENSPNYG00000010130	trnau1apa	98	59.406	Pundamilia_nyererei
ENSCPOG00000001925	TRNAU1AP	96	54.895	ENSPNAG00000024905	trnau1apa	92	54.093	Pygocentrus_nattereri
ENSCPOG00000001925	TRNAU1AP	94	90.775	ENSRNOG00000055344	Trnau1ap	92	90.775	Rattus_norvegicus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSRBIG00000029083	TRNAU1AP	100	99.303	Rhinopithecus_bieti
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSRROG00000029128	TRNAU1AP	100	99.303	Rhinopithecus_roxellana
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSSBOG00000021299	TRNAU1AP	100	99.303	Saimiri_boliviensis_boliviensis
ENSCPOG00000001925	TRNAU1AP	100	94.774	ENSSHAG00000008108	TRNAU1AP	100	94.774	Sarcophilus_harrisii
ENSCPOG00000001925	TRNAU1AP	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSCPOG00000001925	TRNAU1AP	85	71.111	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSCPOG00000001925	TRNAU1AP	95	60.851	ENSSLDG00000012101	trnau1apa	92	60.851	Seriola_lalandi_dorsalis
ENSCPOG00000001925	TRNAU1AP	97	98.561	ENSSARG00000007536	TRNAU1AP	100	98.561	Sorex_araneus
ENSCPOG00000001925	TRNAU1AP	99	86.014	ENSSPUG00000010400	-	100	86.014	Sphenodon_punctatus
ENSCPOG00000001925	TRNAU1AP	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSCPOG00000001925	TRNAU1AP	96	59.524	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSCPOG00000001925	TRNAU1AP	100	99.303	ENSSSCG00000030284	TRNAU1AP	100	99.303	Sus_scrofa
ENSCPOG00000001925	TRNAU1AP	97	94.245	ENSTGUG00000000735	-	100	94.245	Taeniopygia_guttata
ENSCPOG00000001925	TRNAU1AP	68	52.551	ENSTGUG00000005908	-	100	52.551	Taeniopygia_guttata
ENSCPOG00000001925	TRNAU1AP	98	58.804	ENSTRUG00000003352	trnau1apa	98	71.852	Takifugu_rubripes
ENSCPOG00000001925	TRNAU1AP	95	58.885	ENSTNIG00000006129	trnau1apa	98	56.766	Tetraodon_nigroviridis
ENSCPOG00000001925	TRNAU1AP	85	87.347	ENSTBEG00000008049	-	100	87.347	Tupaia_belangeri
ENSCPOG00000001925	TRNAU1AP	100	98.955	ENSTTRG00000001854	TRNAU1AP	100	98.955	Tursiops_truncatus
ENSCPOG00000001925	TRNAU1AP	95	98.905	ENSUAMG00000008789	TRNAU1AP	100	98.905	Ursus_americanus
ENSCPOG00000001925	TRNAU1AP	100	98.606	ENSUMAG00000011068	TRNAU1AP	100	98.606	Ursus_maritimus
ENSCPOG00000001925	TRNAU1AP	100	88.356	ENSVPAG00000006778	TRNAU1AP	100	88.356	Vicugna_pacos
ENSCPOG00000001925	TRNAU1AP	99	97.887	ENSVVUG00000012518	TRNAU1AP	93	97.887	Vulpes_vulpes
ENSCPOG00000001925	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus