EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000002066 (Gene tree)
Gene ID: 100733741
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 9448 bases
Position: chrDS562859.1:22343207-22352654
Accession: 100733741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017386	RRM_1	PF00076.22	5.1e-18	1	1
ENSCPOP00000026557	RRM_1	PF00076.22	5.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002093	RNPS1-201	1678	XM_005007435	ENSCPOP00000017386	282 (aa)	XP_005007492	H0W341
ENSCPOT00000038379	RNPS1-202	2210	XM_003478484	ENSCPOP00000026557	305 (aa)	XP_003478532	A0A286XMB7

Gene Model

Click here to download ENSCPOG00000002066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002066	RNPS1	100	99.672	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSCPOG00000002066	RNPS1	78	69.038	ENSAPOG00000014649	-	85	70.124	Acanthochromis_polyacanthus
ENSCPOG00000002066	RNPS1	100	99.672	ENSAMEG00000017861	RNPS1	100	99.672	Ailuropoda_melanoleuca
ENSCPOG00000002066	RNPS1	76	67.907	ENSACIG00000014367	-	76	66.512	Amphilophus_citrinellus
ENSCPOG00000002066	RNPS1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
ENSCPOG00000002066	RNPS1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
ENSCPOG00000002066	RNPS1	85	72.083	ENSATEG00000024267	RNPS1	84	72.614	Anabas_testudineus
ENSCPOG00000002066	RNPS1	86	65.399	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSCPOG00000002066	RNPS1	76	90.558	ENSACAG00000004088	RNPS1	94	90.558	Anolis_carolinensis
ENSCPOG00000002066	RNPS1	77	96.330	ENSANAG00000029802	-	90	92.469	Aotus_nancymaae
ENSCPOG00000002066	RNPS1	100	99.344	ENSANAG00000028802	RNPS1	100	99.344	Aotus_nancymaae
ENSCPOG00000002066	RNPS1	85	64.167	ENSACLG00000021537	-	96	67.925	Astatotilapia_calliptera
ENSCPOG00000002066	RNPS1	85	75.417	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
ENSCPOG00000002066	RNPS1	100	99.016	ENSBTAG00000009969	RNPS1	100	99.016	Bos_taurus
ENSCPOG00000002066	RNPS1	100	99.672	ENSCJAG00000014969	RNPS1	100	99.672	Callithrix_jacchus
ENSCPOG00000002066	RNPS1	100	99.672	ENSCAFG00000019397	RNPS1	100	99.672	Canis_familiaris
ENSCPOG00000002066	RNPS1	100	99.672	ENSCAFG00020026159	RNPS1	100	99.672	Canis_lupus_dingo
ENSCPOG00000002066	RNPS1	72	99.020	ENSCHIG00000014621	-	69	98.537	Capra_hircus
ENSCPOG00000002066	RNPS1	79	95.041	ENSTSYG00000031848	-	98	95.000	Carlito_syrichta
ENSCPOG00000002066	RNPS1	100	99.672	ENSTSYG00000001629	RNPS1	100	99.672	Carlito_syrichta
ENSCPOG00000002066	RNPS1	100	100.000	ENSCAPG00000007731	RNPS1	100	100.000	Cavia_aperea
ENSCPOG00000002066	RNPS1	100	99.344	ENSCCAG00000034480	RNPS1	100	99.344	Cebus_capucinus
ENSCPOG00000002066	RNPS1	100	99.672	ENSCATG00000013756	RNPS1	100	99.672	Cercocebus_atys
ENSCPOG00000002066	RNPS1	95	89.691	ENSCATG00000042361	-	87	93.511	Cercocebus_atys
ENSCPOG00000002066	RNPS1	100	99.344	ENSCLAG00000015546	RNPS1	100	99.344	Chinchilla_lanigera
ENSCPOG00000002066	RNPS1	100	96.809	ENSCSAG00000005219	-	95	96.809	Chlorocebus_sabaeus
ENSCPOG00000002066	RNPS1	100	98.033	ENSCHOG00000004866	RNPS1	100	98.033	Choloepus_hoffmanni
ENSCPOG00000002066	RNPS1	79	63.750	ENSCPBG00000000214	RNPS1	73	63.889	Chrysemys_picta_bellii
ENSCPOG00000002066	RNPS1	72	85.096	ENSCANG00000030189	-	79	69.712	Colobus_angolensis_palliatus
ENSCPOG00000002066	RNPS1	100	99.672	ENSCANG00000041307	RNPS1	100	99.672	Colobus_angolensis_palliatus
ENSCPOG00000002066	RNPS1	100	99.672	ENSCGRG00001020431	Rnps1	100	99.672	Cricetulus_griseus_chok1gshd
ENSCPOG00000002066	RNPS1	100	99.016	ENSCGRG00000014021	Rnps1	80	99.587	Cricetulus_griseus_crigri
ENSCPOG00000002066	RNPS1	85	70.833	ENSCSEG00000000402	RNPS1	85	68.321	Cynoglossus_semilaevis
ENSCPOG00000002066	RNPS1	85	69.874	ENSCSEG00000015997	RNPS1	82	69.874	Cynoglossus_semilaevis
ENSCPOG00000002066	RNPS1	77	70.968	ENSCVAG00000010868	RNPS1	75	64.815	Cyprinodon_variegatus
ENSCPOG00000002066	RNPS1	85	63.750	ENSDARG00000100188	RNPS1	84	69.710	Danio_rerio
ENSCPOG00000002066	RNPS1	85	63.750	ENSDARG00000116743	rnps1	84	69.710	Danio_rerio
ENSCPOG00000002066	RNPS1	70	72.959	ENSDNOG00000038751	-	99	72.222	Dasypus_novemcinctus
ENSCPOG00000002066	RNPS1	100	99.672	ENSDNOG00000016081	RNPS1	100	99.672	Dasypus_novemcinctus
ENSCPOG00000002066	RNPS1	100	99.016	ENSDORG00000001755	Rnps1	100	99.016	Dipodomys_ordii
ENSCPOG00000002066	RNPS1	100	99.672	ENSEASG00005004862	RNPS1	100	99.672	Equus_asinus_asinus
ENSCPOG00000002066	RNPS1	81	93.145	ENSECAG00000023288	RNPS1	83	97.835	Equus_caballus
ENSCPOG00000002066	RNPS1	100	80.984	ENSEEUG00000005933	RNPS1	100	80.984	Erinaceus_europaeus
ENSCPOG00000002066	RNPS1	100	99.344	ENSFCAG00000007690	RNPS1	100	99.344	Felis_catus
ENSCPOG00000002066	RNPS1	85	94.979	ENSFALG00000004868	RNPS1	85	95.000	Ficedula_albicollis
ENSCPOG00000002066	RNPS1	100	99.016	ENSFDAG00000003386	RNPS1	100	99.016	Fukomys_damarensis
ENSCPOG00000002066	RNPS1	77	70.833	ENSFHEG00000011705	RNPS1	75	71.429	Fundulus_heteroclitus
ENSCPOG00000002066	RNPS1	85	95.000	ENSGALG00000009288	RNPS1	85	95.000	Gallus_gallus
ENSCPOG00000002066	RNPS1	85	68.050	ENSGACG00000005641	-	84	68.050	Gasterosteus_aculeatus
ENSCPOG00000002066	RNPS1	86	93.156	ENSGAGG00000010452	RNPS1	86	93.156	Gopherus_agassizii
ENSCPOG00000002066	RNPS1	100	99.672	ENSGGOG00000014275	RNPS1	100	99.672	Gorilla_gorilla
ENSCPOG00000002066	RNPS1	73	97.585	ENSGGOG00000026421	-	79	97.585	Gorilla_gorilla
ENSCPOG00000002066	RNPS1	79	64.315	ENSHBUG00000017337	-	84	71.784	Haplochromis_burtoni
ENSCPOG00000002066	RNPS1	79	95.536	ENSHGLG00000006292	-	97	94.737	Heterocephalus_glaber_female
ENSCPOG00000002066	RNPS1	100	99.672	ENSHGLG00000013957	RNPS1	100	99.672	Heterocephalus_glaber_female
ENSCPOG00000002066	RNPS1	73	92.195	ENSHGLG00100011610	-	84	92.195	Heterocephalus_glaber_male
ENSCPOG00000002066	RNPS1	92	93.846	ENSHGLG00100015267	-	80	95.045	Heterocephalus_glaber_male
ENSCPOG00000002066	RNPS1	100	99.672	ENSHGLG00100003539	RNPS1	100	99.672	Heterocephalus_glaber_male
ENSCPOG00000002066	RNPS1	80	82.857	ENSHGLG00100017879	-	80	69.835	Heterocephalus_glaber_male
ENSCPOG00000002066	RNPS1	99	85.409	ENSSTOG00000013200	RNPS1	100	88.525	Ictidomys_tridecemlineatus
ENSCPOG00000002066	RNPS1	100	99.344	ENSJJAG00000015576	-	100	99.344	Jaculus_jaculus
ENSCPOG00000002066	RNPS1	86	81.749	ENSJJAG00000019234	-	68	79.079	Jaculus_jaculus
ENSCPOG00000002066	RNPS1	85	71.784	ENSKMAG00000009135	RNPS1	84	67.220	Kryptolebias_marmoratus
ENSCPOG00000002066	RNPS1	85	87.917	ENSLACG00000007112	RNPS1	85	87.917	Latimeria_chalumnae
ENSCPOG00000002066	RNPS1	85	67.500	ENSLOCG00000001758	RNPS1	84	83.333	Lepisosteus_oculatus
ENSCPOG00000002066	RNPS1	86	89.354	ENSMFAG00000044121	-	83	82.857	Macaca_fascicularis
ENSCPOG00000002066	RNPS1	100	99.672	ENSMFAG00000042142	RNPS1	100	99.672	Macaca_fascicularis
ENSCPOG00000002066	RNPS1	72	99.507	ENSMMUG00000019238	-	80	100.000	Macaca_mulatta
ENSCPOG00000002066	RNPS1	88	94.403	ENSMMUG00000041726	-	92	94.297	Macaca_mulatta
ENSCPOG00000002066	RNPS1	88	94.776	ENSMNEG00000024827	-	92	94.677	Macaca_nemestrina
ENSCPOG00000002066	RNPS1	100	99.672	ENSMLEG00000036928	RNPS1	100	99.672	Mandrillus_leucophaeus
ENSCPOG00000002066	RNPS1	73	92.754	ENSMLEG00000040232	-	81	92.754	Mandrillus_leucophaeus
ENSCPOG00000002066	RNPS1	85	74.167	ENSMAMG00000021148	-	88	67.816	Mastacembelus_armatus
ENSCPOG00000002066	RNPS1	85	70.000	ENSMAMG00000021609	-	84	70.539	Mastacembelus_armatus
ENSCPOG00000002066	RNPS1	78	64.167	ENSMZEG00005006256	-	85	71.784	Maylandia_zebra
ENSCPOG00000002066	RNPS1	78	94.521	ENSMGAG00000010042	RNPS1	98	94.068	Meleagris_gallopavo
ENSCPOG00000002066	RNPS1	100	99.016	ENSMICG00000031543	RNPS1	100	99.016	Microcebus_murinus
ENSCPOG00000002066	RNPS1	100	99.672	ENSMOCG00000003429	Rnps1	100	99.672	Microtus_ochrogaster
ENSCPOG00000002066	RNPS1	76	66.512	ENSMMOG00000010863	RNPS1	75	65.116	Mola_mola
ENSCPOG00000002066	RNPS1	100	97.386	ENSMODG00000015891	RNPS1	100	97.386	Monodelphis_domestica
ENSCPOG00000002066	RNPS1	100	99.672	ENSMUSG00000034681	Rnps1	100	99.672	Mus_musculus
ENSCPOG00000002066	RNPS1	100	99.645	MGP_PahariEiJ_G0023498	Rnps1	100	99.645	Mus_pahari
ENSCPOG00000002066	RNPS1	100	99.672	MGP_SPRETEiJ_G0022092	Rnps1	100	99.672	Mus_spretus
ENSCPOG00000002066	RNPS1	100	99.672	ENSMLUG00000016808	RNPS1	100	99.672	Myotis_lucifugus
ENSCPOG00000002066	RNPS1	100	99.645	ENSNGAG00000023702	Rnps1	100	99.645	Nannospalax_galili
ENSCPOG00000002066	RNPS1	76	67.907	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
ENSCPOG00000002066	RNPS1	85	64.315	ENSNBRG00000014540	-	92	68.359	Neolamprologus_brichardi
ENSCPOG00000002066	RNPS1	89	97.794	ENSNLEG00000009243	RNPS1	100	97.794	Nomascus_leucogenys
ENSCPOG00000002066	RNPS1	100	96.393	ENSMEUG00000008882	RNPS1	100	96.393	Notamacropus_eugenii
ENSCPOG00000002066	RNPS1	100	96.393	ENSOPRG00000016422	RNPS1	100	96.393	Ochotona_princeps
ENSCPOG00000002066	RNPS1	57	66.250	ENSODEG00000017258	-	77	64.516	Octodon_degus
ENSCPOG00000002066	RNPS1	58	64.634	ENSODEG00000002513	-	79	64.516	Octodon_degus
ENSCPOG00000002066	RNPS1	85	69.583	ENSORLG00015011183	RNPS1	74	70.954	Oryzias_latipes_hsok
ENSCPOG00000002066	RNPS1	95	98.966	ENSOARG00000018056	-	81	98.966	Ovis_aries
ENSCPOG00000002066	RNPS1	89	94.444	ENSPPAG00000011845	RNPS1	90	93.724	Pan_paniscus
ENSCPOG00000002066	RNPS1	79	94.628	ENSPPAG00000037836	-	99	94.628	Pan_paniscus
ENSCPOG00000002066	RNPS1	100	99.344	ENSPPRG00000011255	RNPS1	100	99.344	Panthera_pardus
ENSCPOG00000002066	RNPS1	63	100.000	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSCPOG00000002066	RNPS1	78	93.305	ENSPTRG00000046326	-	91	93.305	Pan_troglodytes
ENSCPOG00000002066	RNPS1	100	100.000	ENSPTRG00000031310	RNPS1	100	100.000	Pan_troglodytes
ENSCPOG00000002066	RNPS1	100	99.672	ENSPANG00000015748	RNPS1	100	99.672	Papio_anubis
ENSCPOG00000002066	RNPS1	73	72.464	ENSPANG00000033576	-	75	73.632	Papio_anubis
ENSCPOG00000002066	RNPS1	85	79.668	ENSPKIG00000023465	RNPS1	85	79.668	Paramormyrops_kingsleyae
ENSCPOG00000002066	RNPS1	85	94.142	ENSPSIG00000006048	RNPS1	86	92.776	Pelodiscus_sinensis
ENSCPOG00000002066	RNPS1	100	99.672	ENSPEMG00000012797	Rnps1	100	99.672	Peromyscus_maniculatus_bairdii
ENSCPOG00000002066	RNPS1	100	97.872	ENSPCIG00000025012	RNPS1	100	97.872	Phascolarctos_cinereus
ENSCPOG00000002066	RNPS1	61	88.742	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSCPOG00000002066	RNPS1	77	67.742	ENSPFOG00000009978	RNPS1	75	63.889	Poecilia_formosa
ENSCPOG00000002066	RNPS1	77	67.742	ENSPLAG00000009343	RNPS1	75	63.889	Poecilia_latipinna
ENSCPOG00000002066	RNPS1	77	67.742	ENSPMEG00000008552	RNPS1	75	63.889	Poecilia_mexicana
ENSCPOG00000002066	RNPS1	77	67.742	ENSPREG00000001843	RNPS1	75	63.889	Poecilia_reticulata
ENSCPOG00000002066	RNPS1	100	97.377	ENSPCAG00000004514	RNPS1	100	97.377	Procavia_capensis
ENSCPOG00000002066	RNPS1	100	99.344	ENSPCOG00000005478	RNPS1	100	99.344	Propithecus_coquereli
ENSCPOG00000002066	RNPS1	100	99.344	ENSPVAG00000005105	RNPS1	100	99.344	Pteropus_vampyrus
ENSCPOG00000002066	RNPS1	85	76.250	ENSPNAG00000025479	RNPS1	84	69.583	Pygocentrus_nattereri
ENSCPOG00000002066	RNPS1	100	100.000	ENSRNOG00000008703	Rnps1	100	100.000	Rattus_norvegicus
ENSCPOG00000002066	RNPS1	99	98.932	ENSRBIG00000038965	-	99	98.932	Rhinopithecus_bieti
ENSCPOG00000002066	RNPS1	89	99.632	ENSRROG00000041252	RNPS1	97	96.218	Rhinopithecus_roxellana
ENSCPOG00000002066	RNPS1	100	99.672	ENSSBOG00000027927	RNPS1	100	99.672	Saimiri_boliviensis_boliviensis
ENSCPOG00000002066	RNPS1	100	97.705	ENSSHAG00000016951	RNPS1	100	97.705	Sarcophilus_harrisii
ENSCPOG00000002066	RNPS1	85	73.029	ENSSFOG00015022746	RNPS1	87	67.083	Scleropages_formosus
ENSCPOG00000002066	RNPS1	85	76.987	ENSSFOG00015019341	-	75	69.295	Scleropages_formosus
ENSCPOG00000002066	RNPS1	85	70.833	ENSSDUG00000011453	RNPS1	84	71.369	Seriola_dumerili
ENSCPOG00000002066	RNPS1	82	65.217	ENSSLDG00000021341	RNPS1	76	66.995	Seriola_lalandi_dorsalis
ENSCPOG00000002066	RNPS1	79	96.694	ENSSARG00000001577	RNPS1	86	96.694	Sorex_araneus
ENSCPOG00000002066	RNPS1	86	93.916	ENSSPUG00000016588	RNPS1	86	93.916	Sphenodon_punctatus
ENSCPOG00000002066	RNPS1	100	99.344	ENSSSCG00000008048	RNPS1	100	99.344	Sus_scrofa
ENSCPOG00000002066	RNPS1	85	94.561	ENSTGUG00000003237	RNPS1	85	94.583	Taeniopygia_guttata
ENSCPOG00000002066	RNPS1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
ENSCPOG00000002066	RNPS1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
ENSCPOG00000002066	RNPS1	89	99.632	ENSTBEG00000009098	RNPS1	100	99.632	Tupaia_belangeri
ENSCPOG00000002066	RNPS1	100	99.672	ENSTTRG00000008220	RNPS1	100	99.672	Tursiops_truncatus
ENSCPOG00000002066	RNPS1	90	99.634	ENSUAMG00000004462	RNPS1	100	99.634	Ursus_americanus
ENSCPOG00000002066	RNPS1	100	99.672	ENSUMAG00000022327	RNPS1	100	99.672	Ursus_maritimus
ENSCPOG00000002066	RNPS1	100	99.672	ENSVVUG00000009244	RNPS1	100	99.672	Vulpes_vulpes
ENSCPOG00000002066	RNPS1	81	72.174	ENSXETG00000024439	rnps1	73	72.124	Xenopus_tropicalis
ENSCPOG00000002066	RNPS1	85	67.635	ENSXMAG00000004827	RNPS1	84	64.167	Xiphophorus_maculatus