EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002259 (Gene tree)
Gene ID: 100729120
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 37303 bases
Position: chrDS562862.1:34981473-35018775
Accession: 100729120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002050	ResIII	PF04851.15	7e-10	1	1
ENSCPOP00000002050	DEAD	PF00270.29	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002291	SMARCA5-201	4672	XM_003476989	ENSCPOP00000002050	1051 (aa)	XP_003477037	H0UY50

Gene Model

Click here to download ENSCPOG00000002259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002259	SMARCA5	51	30.303	ENSCPOG00000011643	-	65	30.252
ENSCPOG00000002259	SMARCA5	54	42.710	ENSCPOG00000009000	CHD1L	62	42.710
ENSCPOG00000002259	SMARCA5	93	84.093	ENSCPOG00000013601	SMARCA1	93	84.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002259	SMARCA5	100	97.909	ENSG00000153147	SMARCA5	100	97.909	Homo_sapiens
ENSCPOG00000002259	SMARCA5	100	97.909	ENSAMEG00000009585	SMARCA5	100	97.909	Ailuropoda_melanoleuca
ENSCPOG00000002259	SMARCA5	92	96.509	ENSAPLG00000009206	SMARCA5	100	96.509	Anas_platyrhynchos
ENSCPOG00000002259	SMARCA5	98	93.986	ENSACAG00000003038	SMARCA5	99	93.986	Anolis_carolinensis
ENSCPOG00000002259	SMARCA5	100	97.909	ENSANAG00000019345	SMARCA5	99	98.996	Aotus_nancymaae
ENSCPOG00000002259	SMARCA5	100	97.624	ENSBTAG00000003399	SMARCA5	100	97.624	Bos_taurus
ENSCPOG00000002259	SMARCA5	100	97.909	ENSCJAG00000002735	SMARCA5	100	97.909	Callithrix_jacchus
ENSCPOG00000002259	SMARCA5	100	97.909	ENSCAFG00000007525	SMARCA5	100	97.909	Canis_familiaris
ENSCPOG00000002259	SMARCA5	98	97.868	ENSCAFG00020025641	SMARCA5	99	97.868	Canis_lupus_dingo
ENSCPOG00000002259	SMARCA5	100	97.814	ENSCHIG00000013730	-	100	97.814	Capra_hircus
ENSCPOG00000002259	SMARCA5	100	96.103	ENSCHIG00000016375	-	100	96.103	Capra_hircus
ENSCPOG00000002259	SMARCA5	99	95.502	ENSTSYG00000009954	SMARCA5	99	99.295	Carlito_syrichta
ENSCPOG00000002259	SMARCA5	92	99.690	ENSCAPG00000013747	SMARCA5	95	99.690	Cavia_aperea
ENSCPOG00000002259	SMARCA5	100	97.909	ENSCCAG00000027215	SMARCA5	99	99.096	Cebus_capucinus
ENSCPOG00000002259	SMARCA5	100	98.004	ENSCATG00000044917	SMARCA5	100	98.004	Cercocebus_atys
ENSCPOG00000002259	SMARCA5	99	95.781	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSCPOG00000002259	SMARCA5	92	99.278	ENSCSAG00000003448	SMARCA5	100	99.278	Chlorocebus_sabaeus
ENSCPOG00000002259	SMARCA5	90	98.405	ENSCHOG00000011724	SMARCA5	89	98.405	Choloepus_hoffmanni
ENSCPOG00000002259	SMARCA5	98	94.712	ENSCPBG00000027535	SMARCA5	96	98.094	Chrysemys_picta_bellii
ENSCPOG00000002259	SMARCA5	100	97.814	ENSCANG00000041629	SMARCA5	100	97.814	Colobus_angolensis_palliatus
ENSCPOG00000002259	SMARCA5	99	98.004	ENSCGRG00001012719	Smarca5	99	98.004	Cricetulus_griseus_chok1gshd
ENSCPOG00000002259	SMARCA5	95	99.398	ENSCGRG00000001417	Smarca5	99	99.698	Cricetulus_griseus_crigri
ENSCPOG00000002259	SMARCA5	98	94.956	ENSDNOG00000009158	SMARCA5	98	94.956	Dasypus_novemcinctus
ENSCPOG00000002259	SMARCA5	90	90.717	ENSDORG00000003466	Smarca5	97	90.717	Dipodomys_ordii
ENSCPOG00000002259	SMARCA5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSCPOG00000002259	SMARCA5	100	98.099	ENSEASG00005001866	SMARCA5	100	98.099	Equus_asinus_asinus
ENSCPOG00000002259	SMARCA5	100	98.099	ENSECAG00000002676	SMARCA5	100	98.099	Equus_caballus
ENSCPOG00000002259	SMARCA5	94	94.965	ENSEEUG00000013176	SMARCA5	100	94.965	Erinaceus_europaeus
ENSCPOG00000002259	SMARCA5	92	89.072	ENSELUG00000014653	SMARCA5	99	89.072	Esox_lucius
ENSCPOG00000002259	SMARCA5	100	98.004	ENSFCAG00000004544	SMARCA5	100	98.004	Felis_catus
ENSCPOG00000002259	SMARCA5	92	97.113	ENSFALG00000004987	SMARCA5	100	97.113	Ficedula_albicollis
ENSCPOG00000002259	SMARCA5	95	99.400	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSCPOG00000002259	SMARCA5	96	86.944	ENSGMOG00000007519	SMARCA5	94	89.150	Gadus_morhua
ENSCPOG00000002259	SMARCA5	97	96.075	ENSGALG00000009913	SMARCA5	96	97.289	Gallus_gallus
ENSCPOG00000002259	SMARCA5	93	90.481	ENSGACG00000017238	SMARCA5	95	90.481	Gasterosteus_aculeatus
ENSCPOG00000002259	SMARCA5	97	96.559	ENSGAGG00000019882	SMARCA5	96	97.994	Gopherus_agassizii
ENSCPOG00000002259	SMARCA5	100	97.909	ENSGGOG00000012595	SMARCA5	99	99.194	Gorilla_gorilla
ENSCPOG00000002259	SMARCA5	100	98.478	ENSHGLG00000000816	-	99	98.478	Heterocephalus_glaber_female
ENSCPOG00000002259	SMARCA5	96	89.950	ENSHGLG00000000317	-	95	89.960	Heterocephalus_glaber_female
ENSCPOG00000002259	SMARCA5	96	98.510	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSCPOG00000002259	SMARCA5	100	98.291	ENSSTOG00000010683	SMARCA5	99	98.291	Ictidomys_tridecemlineatus
ENSCPOG00000002259	SMARCA5	100	97.716	ENSJJAG00000014965	Smarca5	100	97.716	Jaculus_jaculus
ENSCPOG00000002259	SMARCA5	94	95.257	ENSLACG00000007091	SMARCA5	97	95.257	Latimeria_chalumnae
ENSCPOG00000002259	SMARCA5	94	91.980	ENSLOCG00000008966	SMARCA5	96	91.980	Lepisosteus_oculatus
ENSCPOG00000002259	SMARCA5	100	97.909	ENSLAFG00000007795	SMARCA5	100	97.909	Loxodonta_africana
ENSCPOG00000002259	SMARCA5	100	98.004	ENSMFAG00000043649	SMARCA5	100	98.004	Macaca_fascicularis
ENSCPOG00000002259	SMARCA5	100	98.004	ENSMMUG00000000829	SMARCA5	100	98.004	Macaca_mulatta
ENSCPOG00000002259	SMARCA5	100	98.004	ENSMNEG00000031916	SMARCA5	100	98.004	Macaca_nemestrina
ENSCPOG00000002259	SMARCA5	100	98.004	ENSMLEG00000042393	SMARCA5	100	98.004	Mandrillus_leucophaeus
ENSCPOG00000002259	SMARCA5	96	96.425	ENSMGAG00000003517	SMARCA5	100	96.425	Meleagris_gallopavo
ENSCPOG00000002259	SMARCA5	94	99.799	ENSMAUG00000015902	Smarca5	98	99.799	Mesocricetus_auratus
ENSCPOG00000002259	SMARCA5	100	98.004	ENSMICG00000003971	SMARCA5	100	98.004	Microcebus_murinus
ENSCPOG00000002259	SMARCA5	99	98.192	ENSMOCG00000016986	-	99	98.192	Microtus_ochrogaster
ENSCPOG00000002259	SMARCA5	99	95.802	ENSMODG00000000391	SMARCA5	98	96.705	Monodelphis_domestica
ENSCPOG00000002259	SMARCA5	100	98.097	ENSMUSG00000031715	Smarca5	100	98.097	Mus_musculus
ENSCPOG00000002259	SMARCA5	100	98.287	MGP_PahariEiJ_G0022862	Smarca5	100	98.287	Mus_pahari
ENSCPOG00000002259	SMARCA5	100	98.099	ENSMLUG00000000468	SMARCA5	100	98.099	Myotis_lucifugus
ENSCPOG00000002259	SMARCA5	100	98.192	ENSNGAG00000000441	Smarca5	100	98.192	Nannospalax_galili
ENSCPOG00000002259	SMARCA5	100	98.004	ENSNLEG00000005383	SMARCA5	100	98.004	Nomascus_leucogenys
ENSCPOG00000002259	SMARCA5	92	91.116	ENSMEUG00000001267	SMARCA5	100	91.116	Notamacropus_eugenii
ENSCPOG00000002259	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCPOG00000002259	SMARCA5	92	98.865	ENSOANG00000013921	SMARCA5	100	98.865	Ornithorhynchus_anatinus
ENSCPOG00000002259	SMARCA5	92	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSCPOG00000002259	SMARCA5	100	97.814	ENSOGAG00000009702	SMARCA5	100	97.814	Otolemur_garnettii
ENSCPOG00000002259	SMARCA5	99	97.621	ENSOARG00000010589	SMARCA5	99	97.621	Ovis_aries
ENSCPOG00000002259	SMARCA5	100	97.909	ENSPPAG00000028523	SMARCA5	99	99.094	Pan_paniscus
ENSCPOG00000002259	SMARCA5	98	92.502	ENSPPRG00000004925	SMARCA5	98	93.230	Panthera_pardus
ENSCPOG00000002259	SMARCA5	96	98.910	ENSPTIG00000020959	SMARCA5	97	98.910	Panthera_tigris_altaica
ENSCPOG00000002259	SMARCA5	100	98.004	ENSPTRG00000016472	SMARCA5	99	99.194	Pan_troglodytes
ENSCPOG00000002259	SMARCA5	100	98.004	ENSPANG00000001175	SMARCA5	100	98.004	Papio_anubis
ENSCPOG00000002259	SMARCA5	97	87.622	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSCPOG00000002259	SMARCA5	93	90.676	ENSPKIG00000015699	SMARCA5	98	89.598	Paramormyrops_kingsleyae
ENSCPOG00000002259	SMARCA5	95	95.787	ENSPSIG00000004177	SMARCA5	100	95.787	Pelodiscus_sinensis
ENSCPOG00000002259	SMARCA5	92	89.609	ENSPMGG00000012316	SMARCA5	100	89.609	Periophthalmus_magnuspinnatus
ENSCPOG00000002259	SMARCA5	97	97.839	ENSPEMG00000008060	Smarca5	99	97.839	Peromyscus_maniculatus_bairdii
ENSCPOG00000002259	SMARCA5	96	69.685	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSCPOG00000002259	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSCPOG00000002259	SMARCA5	99	96.146	ENSPCIG00000003926	SMARCA5	98	96.325	Phascolarctos_cinereus
ENSCPOG00000002259	SMARCA5	100	98.099	ENSPPYG00000015091	SMARCA5	100	98.099	Pongo_abelii
ENSCPOG00000002259	SMARCA5	86	88.889	ENSPCAG00000014230	SMARCA5	90	88.889	Procavia_capensis
ENSCPOG00000002259	SMARCA5	100	95.152	ENSPCOG00000026744	SMARCA5	100	95.152	Propithecus_coquereli
ENSCPOG00000002259	SMARCA5	99	97.810	ENSPVAG00000006482	SMARCA5	100	97.810	Pteropus_vampyrus
ENSCPOG00000002259	SMARCA5	99	86.290	ENSPNAG00000027824	SMARCA5	97	90.041	Pygocentrus_nattereri
ENSCPOG00000002259	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSCPOG00000002259	SMARCA5	98	97.874	ENSRBIG00000044644	SMARCA5	98	97.874	Rhinopithecus_bieti
ENSCPOG00000002259	SMARCA5	95	99.195	ENSRROG00000029591	SMARCA5	99	99.195	Rhinopithecus_roxellana
ENSCPOG00000002259	SMARCA5	100	98.099	ENSSBOG00000036257	SMARCA5	100	98.099	Saimiri_boliviensis_boliviensis
ENSCPOG00000002259	SMARCA5	94	98.892	ENSSHAG00000008464	SMARCA5	100	98.892	Sarcophilus_harrisii
ENSCPOG00000002259	SMARCA5	100	86.122	ENSSFOG00015013252	SMARCA5	97	89.950	Scleropages_formosus
ENSCPOG00000002259	SMARCA5	98	93.333	ENSSPUG00000007604	SMARCA5	99	96.181	Sphenodon_punctatus
ENSCPOG00000002259	SMARCA5	100	97.529	ENSSSCG00000009047	SMARCA5	100	97.529	Sus_scrofa
ENSCPOG00000002259	SMARCA5	96	95.833	ENSTGUG00000002408	SMARCA5	100	95.833	Taeniopygia_guttata
ENSCPOG00000002259	SMARCA5	98	97.771	ENSUAMG00000023495	SMARCA5	99	97.771	Ursus_americanus
ENSCPOG00000002259	SMARCA5	95	99.103	ENSUMAG00000015324	SMARCA5	97	99.103	Ursus_maritimus
ENSCPOG00000002259	SMARCA5	100	97.719	ENSVPAG00000008982	SMARCA5	100	97.719	Vicugna_pacos
ENSCPOG00000002259	SMARCA5	100	97.909	ENSVVUG00000017473	SMARCA5	100	97.909	Vulpes_vulpes
ENSCPOG00000002259	SMARCA5	90	93.031	ENSXETG00000017566	smarca5	94	93.610	Xenopus_tropicalis