EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002335 (Gene tree)
Gene ID: 100723839
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 10724 bases
Position: chrDS562870.1:41389131-41399854
Accession: 100723839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002121	ResIII	PF04851.15	1.5e-07	1	1
ENSCPOP00000002121	DEAD	PF00270.29	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002367	DDX39B-201	1763	XM_003473987	ENSCPOP00000002121	428 (aa)	XP_003474035	H0UYB6

Gene Model

Click here to download ENSCPOG00000002335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002335	DDX39B	86	38.919	ENSCPOG00000011183	-	94	35.906
ENSCPOG00000002335	DDX39B	99	31.395	ENSCPOG00000010587	Ddx6	88	31.395
ENSCPOG00000002335	DDX39B	85	38.356	ENSCPOG00000006485	EIF4A3	88	38.356
ENSCPOG00000002335	DDX39B	92	36.802	ENSCPOG00000004900	-	97	36.802
ENSCPOG00000002335	DDX39B	77	30.029	ENSCPOG00000007133	DDX5	55	30.029
ENSCPOG00000002335	DDX39B	100	90.888	ENSCPOG00000008615	DDX39A	100	90.888
ENSCPOG00000002335	DDX39B	81	35.447	ENSCPOG00000035172	DDX47	75	35.447
ENSCPOG00000002335	DDX39B	91	32.581	ENSCPOG00000006743	-	84	32.581
ENSCPOG00000002335	DDX39B	87	32.808	ENSCPOG00000013626	DDX49	78	32.808
ENSCPOG00000002335	DDX39B	91	31.579	ENSCPOG00000011456	DDX25	82	31.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002335	DDX39B	100	99.766	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSCPOG00000002335	DDX39B	100	99.533	ENSAMEG00000009508	DDX39B	99	99.533	Ailuropoda_melanoleuca
ENSCPOG00000002335	DDX39B	99	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSCPOG00000002335	DDX39B	100	92.593	ENSATEG00000012366	ddx39b	100	92.593	Anabas_testudineus
ENSCPOG00000002335	DDX39B	100	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSCPOG00000002335	DDX39B	100	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSCPOG00000002335	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSCPOG00000002335	DDX39B	100	92.202	ENSAMXG00000017837	ddx39b	100	92.202	Astyanax_mexicanus
ENSCPOG00000002335	DDX39B	100	99.533	ENSBTAG00000014490	DDX39B	100	99.533	Bos_taurus
ENSCPOG00000002335	DDX39B	100	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSCPOG00000002335	DDX39B	100	99.299	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSCPOG00000002335	DDX39B	100	99.299	ENSCAFG00020020530	DDX39B	100	99.299	Canis_lupus_dingo
ENSCPOG00000002335	DDX39B	100	99.533	ENSCHIG00000004579	DDX39B	100	99.533	Capra_hircus
ENSCPOG00000002335	DDX39B	100	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSCPOG00000002335	DDX39B	100	85.047	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSCPOG00000002335	DDX39B	100	100.000	ENSCAPG00000010066	DDX39B	100	100.000	Cavia_aperea
ENSCPOG00000002335	DDX39B	100	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSCPOG00000002335	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSCPOG00000002335	DDX39B	100	100.000	ENSCLAG00000014555	DDX39B	100	100.000	Chinchilla_lanigera
ENSCPOG00000002335	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSCPOG00000002335	DDX39B	64	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSCPOG00000002335	DDX39B	100	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSCPOG00000002335	DDX39B	57	98.776	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSCPOG00000002335	DDX39B	83	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSCPOG00000002335	DDX39B	57	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSCPOG00000002335	DDX39B	100	91.954	ENSDARG00000036069	ddx39b	100	92.184	Danio_rerio
ENSCPOG00000002335	DDX39B	100	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSCPOG00000002335	DDX39B	87	99.465	ENSDORG00000004985	Ddx39b	100	99.465	Dipodomys_ordii
ENSCPOG00000002335	DDX39B	87	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSCPOG00000002335	DDX39B	100	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSCPOG00000002335	DDX39B	100	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSCPOG00000002335	DDX39B	100	92.111	ENSELUG00000017904	ddx39b	100	92.111	Esox_lucius
ENSCPOG00000002335	DDX39B	100	99.533	ENSFCAG00000004497	DDX39B	100	99.533	Felis_catus
ENSCPOG00000002335	DDX39B	100	100.000	ENSFDAG00000011074	DDX39B	100	100.000	Fukomys_damarensis
ENSCPOG00000002335	DDX39B	74	99.367	ENSGAGG00000001300	-	80	99.367	Gopherus_agassizii
ENSCPOG00000002335	DDX39B	100	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSCPOG00000002335	DDX39B	100	99.533	ENSHGLG00000019248	DDX39B	100	99.533	Heterocephalus_glaber_female
ENSCPOG00000002335	DDX39B	100	99.533	ENSHGLG00100011850	DDX39B	100	99.533	Heterocephalus_glaber_male
ENSCPOG00000002335	DDX39B	100	91.055	ENSIPUG00000015733	DDX39B	94	91.514	Ictalurus_punctatus
ENSCPOG00000002335	DDX39B	100	99.766	ENSSTOG00000012838	DDX39B	100	99.766	Ictidomys_tridecemlineatus
ENSCPOG00000002335	DDX39B	100	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSCPOG00000002335	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSCPOG00000002335	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSCPOG00000002335	DDX39B	100	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSCPOG00000002335	DDX39B	100	99.533	ENSLAFG00000014202	DDX39B	100	99.533	Loxodonta_africana
ENSCPOG00000002335	DDX39B	100	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSCPOG00000002335	DDX39B	100	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSCPOG00000002335	DDX39B	100	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSCPOG00000002335	DDX39B	100	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSCPOG00000002335	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSCPOG00000002335	DDX39B	100	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSCPOG00000002335	DDX39B	100	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSCPOG00000002335	DDX39B	100	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSCPOG00000002335	DDX39B	88	99.468	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSCPOG00000002335	DDX39B	100	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSCPOG00000002335	DDX39B	100	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSCPOG00000002335	DDX39B	100	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSCPOG00000002335	DDX39B	100	99.533	ENSMPUG00000011407	DDX39B	100	99.533	Mustela_putorius_furo
ENSCPOG00000002335	DDX39B	73	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSCPOG00000002335	DDX39B	100	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSCPOG00000002335	DDX39B	100	75.234	ENSNLEG00000006094	DDX39B	100	75.234	Nomascus_leucogenys
ENSCPOG00000002335	DDX39B	86	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSCPOG00000002335	DDX39B	100	99.533	ENSOPRG00000011923	DDX39B	100	99.533	Ochotona_princeps
ENSCPOG00000002335	DDX39B	100	99.766	ENSODEG00000018083	DDX39B	100	99.766	Octodon_degus
ENSCPOG00000002335	DDX39B	100	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSCPOG00000002335	DDX39B	55	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSCPOG00000002335	DDX39B	100	95.937	ENSOCUG00000024126	DDX39B	100	95.937	Oryctolagus_cuniculus
ENSCPOG00000002335	DDX39B	84	91.444	ENSOGAG00000009067	-	100	98.148	Otolemur_garnettii
ENSCPOG00000002335	DDX39B	100	98.368	ENSOGAG00000028850	-	100	98.368	Otolemur_garnettii
ENSCPOG00000002335	DDX39B	100	99.533	ENSOARG00000008787	DDX39B	98	99.533	Ovis_aries
ENSCPOG00000002335	DDX39B	100	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSCPOG00000002335	DDX39B	100	99.533	ENSPPRG00000001913	DDX39B	100	99.533	Panthera_pardus
ENSCPOG00000002335	DDX39B	100	98.598	ENSPTIG00000017669	DDX39B	100	98.598	Panthera_tigris_altaica
ENSCPOG00000002335	DDX39B	100	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSCPOG00000002335	DDX39B	100	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSCPOG00000002335	DDX39B	100	90.618	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSCPOG00000002335	DDX39B	100	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSCPOG00000002335	DDX39B	100	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSCPOG00000002335	DDX39B	100	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSCPOG00000002335	DDX39B	66	99.296	ENSPCAG00000003484	DDX39B	100	99.296	Procavia_capensis
ENSCPOG00000002335	DDX39B	100	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSCPOG00000002335	DDX39B	100	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSCPOG00000002335	DDX39B	98	82.547	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSCPOG00000002335	DDX39B	100	91.972	ENSPNAG00000026926	ddx39b	100	91.972	Pygocentrus_nattereri
ENSCPOG00000002335	DDX39B	100	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSCPOG00000002335	DDX39B	100	89.486	ENSRBIG00000031309	DDX39B	100	89.486	Rhinopithecus_bieti
ENSCPOG00000002335	DDX39B	100	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSCPOG00000002335	DDX39B	100	89.486	ENSSBOG00000035513	-	100	89.486	Saimiri_boliviensis_boliviensis
ENSCPOG00000002335	DDX39B	100	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSCPOG00000002335	DDX39B	100	90.847	ENSSFOG00015016107	ddx39b	100	91.533	Scleropages_formosus
ENSCPOG00000002335	DDX39B	100	93.056	ENSSDUG00000011557	ddx39b	100	93.287	Seriola_dumerili
ENSCPOG00000002335	DDX39B	100	92.824	ENSSLDG00000015763	ddx39b	100	93.056	Seriola_lalandi_dorsalis
ENSCPOG00000002335	DDX39B	87	87.433	ENSSARG00000005245	DDX39B	100	87.433	Sorex_araneus
ENSCPOG00000002335	DDX39B	100	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSCPOG00000002335	DDX39B	100	99.766	ENSSSCG00000001400	DDX39B	100	99.711	Sus_scrofa
ENSCPOG00000002335	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSCPOG00000002335	DDX39B	100	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSCPOG00000002335	DDX39B	100	86.744	ENSUAMG00000027335	DDX39B	100	86.744	Ursus_americanus
ENSCPOG00000002335	DDX39B	100	90.654	ENSUMAG00000015124	DDX39B	100	90.654	Ursus_maritimus
ENSCPOG00000002335	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSCPOG00000002335	DDX39B	100	99.299	ENSVVUG00000019518	DDX39B	99	99.299	Vulpes_vulpes
ENSCPOG00000002335	DDX39B	100	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis