EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: exosome component 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 815 bases
Position: chrDS562877.1:2980727-2981541
Accession: 101788453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023812	RNase_PH	PF01138.21	4.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002404	-	741	XM_005008445	ENSCPOP00000023812	246 (aa)	XP_005008502	A0A286XEC1

Gene Model

Click here to download ENSCPOG00000002371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002371	-	99	77.860	ENSCPOG00000037814	-	96	78.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002371	-	67	30.366	ENSG00000178896	EXOSC4	73	30.366	Homo_sapiens
ENSCPOG00000002371	-	95	83.077	ENSG00000223496	EXOSC6	96	83.077	Homo_sapiens
ENSCPOG00000002371	-	100	37.500	ENSAPOG00000022329	exosc6	95	37.091	Acanthochromis_polyacanthus
ENSCPOG00000002371	-	67	30.366	ENSAMEG00000006093	EXOSC4	73	30.366	Ailuropoda_melanoleuca
ENSCPOG00000002371	-	100	37.329	ENSACIG00000016636	exosc6	95	36.786	Amphilophus_citrinellus
ENSCPOG00000002371	-	100	37.500	ENSAOCG00000006951	exosc6	95	37.091	Amphiprion_ocellaris
ENSCPOG00000002371	-	100	37.500	ENSAPEG00000022951	exosc6	95	37.091	Amphiprion_percula
ENSCPOG00000002371	-	100	37.631	ENSATEG00000014148	exosc6	95	37.226	Anabas_testudineus
ENSCPOG00000002371	-	100	70.588	ENSANAG00000009362	EXOSC6	100	74.632	Aotus_nancymaae
ENSCPOG00000002371	-	67	30.366	ENSANAG00000026123	EXOSC4	73	30.366	Aotus_nancymaae
ENSCPOG00000002371	-	97	37.011	ENSACLG00000022304	exosc6	95	36.957	Astatotilapia_calliptera
ENSCPOG00000002371	-	100	41.115	ENSAMXG00000026269	exosc6	96	40.146	Astyanax_mexicanus
ENSCPOG00000002371	-	95	81.154	ENSBTAG00000053923	EXOSC6	96	81.154	Bos_taurus
ENSCPOG00000002371	-	67	30.366	ENSBTAG00000014607	EXOSC4	73	30.366	Bos_taurus
ENSCPOG00000002371	-	95	83.077	ENSCJAG00000014559	EXOSC6	96	83.077	Callithrix_jacchus
ENSCPOG00000002371	-	67	30.366	ENSCJAG00000021458	EXOSC4	73	30.366	Callithrix_jacchus
ENSCPOG00000002371	-	67	30.366	ENSCAFG00000001521	EXOSC4	73	30.366	Canis_familiaris
ENSCPOG00000002371	-	67	30.366	ENSCAFG00020018820	EXOSC4	73	30.366	Canis_lupus_dingo
ENSCPOG00000002371	-	95	84.615	ENSCAFG00020020974	EXOSC6	96	84.615	Canis_lupus_dingo
ENSCPOG00000002371	-	95	82.692	ENSCHIG00000007389	EXOSC6	96	82.692	Capra_hircus
ENSCPOG00000002371	-	67	30.366	ENSCHIG00000021121	EXOSC4	73	30.366	Capra_hircus
ENSCPOG00000002371	-	67	30.366	ENSTSYG00000029697	EXOSC4	73	30.366	Carlito_syrichta
ENSCPOG00000002371	-	67	30.366	ENSCATG00000029965	EXOSC4	73	30.366	Cercocebus_atys
ENSCPOG00000002371	-	67	30.366	ENSCLAG00000014676	EXOSC4	73	30.366	Chinchilla_lanigera
ENSCPOG00000002371	-	100	70.325	ENSCLAG00000004121	EXOSC6	100	70.325	Chinchilla_lanigera
ENSCPOG00000002371	-	67	30.366	ENSCSAG00000008802	EXOSC4	73	30.366	Chlorocebus_sabaeus
ENSCPOG00000002371	-	67	30.366	ENSCANG00000035733	EXOSC4	73	30.366	Colobus_angolensis_palliatus
ENSCPOG00000002371	-	95	82.692	ENSCGRG00001000899	Exosc6	96	82.692	Cricetulus_griseus_chok1gshd
ENSCPOG00000002371	-	100	35.563	ENSCSEG00000014277	exosc6	95	34.686	Cynoglossus_semilaevis
ENSCPOG00000002371	-	59	37.640	ENSCVAG00000021002	EXOSC6	85	37.572	Cyprinodon_variegatus
ENSCPOG00000002371	-	59	37.640	ENSCVAG00000021030	exosc6	84	37.572	Cyprinodon_variegatus
ENSCPOG00000002371	-	100	40.559	ENSDARG00000036060	exosc6	96	40.511	Danio_rerio
ENSCPOG00000002371	-	67	30.366	ENSDNOG00000009800	EXOSC4	73	30.366	Dasypus_novemcinctus
ENSCPOG00000002371	-	100	83.824	ENSDNOG00000032035	EXOSC6	100	83.824	Dasypus_novemcinctus
ENSCPOG00000002371	-	95	83.462	ENSEASG00005013410	EXOSC6	96	83.462	Equus_asinus_asinus
ENSCPOG00000002371	-	95	83.846	ENSECAG00000039860	EXOSC6	96	83.846	Equus_caballus
ENSCPOG00000002371	-	100	38.699	ENSELUG00000015515	exosc6	96	38.214	Esox_lucius
ENSCPOG00000002371	-	95	83.077	ENSFCAG00000046021	EXOSC6	96	83.077	Felis_catus
ENSCPOG00000002371	-	67	30.366	ENSFCAG00000034465	EXOSC4	73	30.366	Felis_catus
ENSCPOG00000002371	-	67	30.366	ENSFDAG00000006708	EXOSC4	73	30.366	Fukomys_damarensis
ENSCPOG00000002371	-	100	39.655	ENSFHEG00000017490	exosc6	95	39.209	Fundulus_heteroclitus
ENSCPOG00000002371	-	72	31.707	ENSFHEG00000013533	exosc4	78	30.542	Fundulus_heteroclitus
ENSCPOG00000002371	-	100	38.542	ENSGMOG00000008151	exosc6	95	38.043	Gadus_morhua
ENSCPOG00000002371	-	81	39.004	ENSGAFG00000015179	exosc6	88	38.776	Gambusia_affinis
ENSCPOG00000002371	-	68	32.143	ENSGAFG00000021407	exosc4	74	30.928	Gambusia_affinis
ENSCPOG00000002371	-	100	40.278	ENSGACG00000002690	exosc6	95	39.636	Gasterosteus_aculeatus
ENSCPOG00000002371	-	69	31.633	ENSGACG00000017838	exosc4	73	31.633	Gasterosteus_aculeatus
ENSCPOG00000002371	-	67	30.366	ENSGGOG00000040193	-	73	30.366	Gorilla_gorilla
ENSCPOG00000002371	-	67	30.366	ENSGGOG00000044212	-	73	30.366	Gorilla_gorilla
ENSCPOG00000002371	-	97	37.011	ENSHBUG00000011123	exosc6	95	36.957	Haplochromis_burtoni
ENSCPOG00000002371	-	67	30.366	ENSHGLG00000016299	EXOSC4	73	30.366	Heterocephalus_glaber_female
ENSCPOG00000002371	-	100	84.191	ENSHGLG00000021313	EXOSC6	100	84.191	Heterocephalus_glaber_female
ENSCPOG00000002371	-	67	30.366	ENSHGLG00100018786	EXOSC4	73	30.366	Heterocephalus_glaber_male
ENSCPOG00000002371	-	68	95.122	ENSHGLG00100014981	EXOSC6	95	95.122	Heterocephalus_glaber_male
ENSCPOG00000002371	-	100	38.194	ENSHCOG00000012112	exosc6	95	37.455	Hippocampus_comes
ENSCPOG00000002371	-	96	41.304	ENSIPUG00000004761	exosc6	95	41.026	Ictalurus_punctatus
ENSCPOG00000002371	-	65	31.053	ENSIPUG00000011922	Exosc4	71	30.319	Ictalurus_punctatus
ENSCPOG00000002371	-	95	83.077	ENSSTOG00000006849	EXOSC6	96	83.077	Ictidomys_tridecemlineatus
ENSCPOG00000002371	-	100	39.929	ENSKMAG00000009821	exosc6	95	39.114	Kryptolebias_marmoratus
ENSCPOG00000002371	-	98	38.163	ENSLBEG00000018680	exosc6	82	37.455	Labrus_bergylta
ENSCPOG00000002371	-	100	41.379	ENSLOCG00000017597	exosc6	95	40.794	Lepisosteus_oculatus
ENSCPOG00000002371	-	67	30.366	ENSMFAG00000000161	EXOSC4	73	30.366	Macaca_fascicularis
ENSCPOG00000002371	-	95	82.308	ENSMFAG00000035562	EXOSC6	96	82.308	Macaca_fascicularis
ENSCPOG00000002371	-	67	30.366	ENSMMUG00000007160	EXOSC4	73	30.366	Macaca_mulatta
ENSCPOG00000002371	-	95	83.077	ENSMMUG00000048384	EXOSC6	96	83.077	Macaca_mulatta
ENSCPOG00000002371	-	67	30.366	ENSMNEG00000033938	EXOSC4	73	30.366	Macaca_nemestrina
ENSCPOG00000002371	-	67	30.366	ENSMLEG00000041197	EXOSC4	73	30.366	Mandrillus_leucophaeus
ENSCPOG00000002371	-	100	37.671	ENSMAMG00000016983	exosc6	95	37.818	Mastacembelus_armatus
ENSCPOG00000002371	-	97	37.011	ENSMZEG00005010720	exosc6	95	36.957	Maylandia_zebra
ENSCPOG00000002371	-	95	83.077	ENSMAUG00000008040	Exosc6	96	83.077	Mesocricetus_auratus
ENSCPOG00000002371	-	95	83.846	ENSMICG00000027202	EXOSC6	96	83.846	Microcebus_murinus
ENSCPOG00000002371	-	95	83.077	ENSMOCG00000003020	Exosc6	96	83.077	Microtus_ochrogaster
ENSCPOG00000002371	-	94	37.052	ENSMMOG00000002581	exosc6	94	37.154	Mola_mola
ENSCPOG00000002371	-	67	30.890	ENSMODG00000010435	EXOSC4	83	30.890	Monodelphis_domestica
ENSCPOG00000002371	-	74	78.082	ENSMODG00000014523	EXOSC6	94	78.082	Monodelphis_domestica
ENSCPOG00000002371	-	100	37.979	ENSMALG00000007871	exosc6	91	37.091	Monopterus_albus
ENSCPOG00000002371	-	69	31.472	ENSMALG00000020564	exosc4	75	31.122	Monopterus_albus
ENSCPOG00000002371	-	100	82.418	ENSMUSG00000109941	Exosc6	100	82.418	Mus_musculus
ENSCPOG00000002371	-	65	91.667	ENSMLUG00000023828	EXOSC6	93	92.958	Myotis_lucifugus
ENSCPOG00000002371	-	97	36.491	ENSNBRG00000007400	exosc6	95	36.429	Neolamprologus_brichardi
ENSCPOG00000002371	-	67	30.366	ENSNLEG00000010449	EXOSC4	73	30.366	Nomascus_leucogenys
ENSCPOG00000002371	-	67	30.890	ENSMEUG00000011002	EXOSC4	73	30.890	Notamacropus_eugenii
ENSCPOG00000002371	-	67	30.366	ENSODEG00000013951	EXOSC4	73	30.366	Octodon_degus
ENSCPOG00000002371	-	100	86.397	ENSODEG00000020448	EXOSC6	100	86.397	Octodon_degus
ENSCPOG00000002371	-	97	37.063	ENSONIG00000011184	exosc6	96	37.184	Oreochromis_niloticus
ENSCPOG00000002371	-	67	30.366	ENSOCUG00000021243	EXOSC4	73	30.366	Oryctolagus_cuniculus
ENSCPOG00000002371	-	100	39.161	ENSORLG00000013325	exosc6	95	38.686	Oryzias_latipes
ENSCPOG00000002371	-	100	39.161	ENSORLG00020017597	exosc6	95	38.686	Oryzias_latipes_hni
ENSCPOG00000002371	-	100	39.161	ENSORLG00015007795	exosc6	95	38.686	Oryzias_latipes_hsok
ENSCPOG00000002371	-	97	38.163	ENSOMEG00000014317	exosc6	96	37.770	Oryzias_melastigma
ENSCPOG00000002371	-	67	30.366	ENSOGAG00000007411	EXOSC4	73	30.366	Otolemur_garnettii
ENSCPOG00000002371	-	100	83.088	ENSOGAG00000034381	EXOSC6	100	83.088	Otolemur_garnettii
ENSCPOG00000002371	-	67	30.570	ENSOARG00000015188	EXOSC4	73	30.570	Ovis_aries
ENSCPOG00000002371	-	67	30.366	ENSPPAG00000035746	EXOSC4	73	30.366	Pan_paniscus
ENSCPOG00000002371	-	95	83.077	ENSPPRG00000021385	EXOSC6	96	83.077	Panthera_pardus
ENSCPOG00000002371	-	67	30.366	ENSPPRG00000019782	EXOSC4	73	30.366	Panthera_pardus
ENSCPOG00000002371	-	67	30.366	ENSPTRG00000020677	EXOSC4	73	30.366	Pan_troglodytes
ENSCPOG00000002371	-	95	83.077	ENSPTRG00000008296	EXOSC6	96	83.077	Pan_troglodytes
ENSCPOG00000002371	-	95	82.692	ENSPANG00000003331	EXOSC6	96	82.692	Papio_anubis
ENSCPOG00000002371	-	67	30.366	ENSPANG00000023276	EXOSC4	73	30.366	Papio_anubis
ENSCPOG00000002371	-	98	42.199	ENSPKIG00000022020	exosc6	96	41.971	Paramormyrops_kingsleyae
ENSCPOG00000002371	-	100	34.737	ENSPMGG00000016974	exosc6	95	34.066	Periophthalmus_magnuspinnatus
ENSCPOG00000002371	-	98	67.518	ENSPCIG00000010685	EXOSC6	86	68.914	Phascolarctos_cinereus
ENSCPOG00000002371	-	95	52.632	ENSPCIG00000006274	-	75	52.256	Phascolarctos_cinereus
ENSCPOG00000002371	-	67	30.366	ENSPCIG00000009102	EXOSC4	73	30.366	Phascolarctos_cinereus
ENSCPOG00000002371	-	100	40.278	ENSPFOG00000015869	exosc6	95	39.493	Poecilia_formosa
ENSCPOG00000002371	-	100	39.931	ENSPLAG00000014150	exosc6	95	39.130	Poecilia_latipinna
ENSCPOG00000002371	-	100	40.278	ENSPMEG00000019665	exosc6	95	39.493	Poecilia_mexicana
ENSCPOG00000002371	-	100	39.583	ENSPREG00000019548	exosc6	95	38.768	Poecilia_reticulata
ENSCPOG00000002371	-	95	82.692	ENSPPYG00000007545	EXOSC6	96	82.692	Pongo_abelii
ENSCPOG00000002371	-	99	82.222	ENSPCAG00000012874	EXOSC6	96	82.692	Procavia_capensis
ENSCPOG00000002371	-	95	82.692	ENSPVAG00000000668	EXOSC6	96	82.692	Pteropus_vampyrus
ENSCPOG00000002371	-	97	37.011	ENSPNYG00000010784	exosc6	95	36.957	Pundamilia_nyererei
ENSCPOG00000002371	-	100	39.721	ENSPNAG00000008453	exosc6	96	39.636	Pygocentrus_nattereri
ENSCPOG00000002371	-	100	81.985	ENSRNOG00000018582	Exosc6	100	81.985	Rattus_norvegicus
ENSCPOG00000002371	-	67	30.366	ENSRBIG00000038476	EXOSC4	73	30.366	Rhinopithecus_bieti
ENSCPOG00000002371	-	95	74.615	ENSRBIG00000003409	EXOSC6	96	74.615	Rhinopithecus_bieti
ENSCPOG00000002371	-	67	30.366	ENSRROG00000038556	EXOSC4	73	30.366	Rhinopithecus_roxellana
ENSCPOG00000002371	-	55	95.890	ENSSBOG00000027402	EXOSC6	96	95.385	Saimiri_boliviensis_boliviensis
ENSCPOG00000002371	-	98	53.818	ENSSHAG00000004175	EXOSC6	96	53.160	Sarcophilus_harrisii
ENSCPOG00000002371	-	67	30.890	ENSSHAG00000005397	EXOSC4	73	30.890	Sarcophilus_harrisii
ENSCPOG00000002371	-	100	38.846	ENSSFOG00015011830	exosc6	93	37.500	Scleropages_formosus
ENSCPOG00000002371	-	100	36.177	ENSSMAG00000014550	exosc6	95	35.714	Scophthalmus_maximus
ENSCPOG00000002371	-	100	36.806	ENSSDUG00000021109	exosc6	95	36.727	Seriola_dumerili
ENSCPOG00000002371	-	100	37.241	ENSSLDG00000017776	exosc6	94	36.727	Seriola_lalandi_dorsalis
ENSCPOG00000002371	-	100	37.847	ENSSPAG00000001379	exosc6	95	37.455	Stegastes_partitus
ENSCPOG00000002371	-	100	82.721	ENSSSCG00000002719	EXOSC6	100	82.721	Sus_scrofa
ENSCPOG00000002371	-	67	30.890	ENSSSCG00000005925	EXOSC4	73	30.890	Sus_scrofa
ENSCPOG00000002371	-	68	30.928	ENSTRUG00000025054	exosc4	74	30.928	Takifugu_rubripes
ENSCPOG00000002371	-	97	37.011	ENSTRUG00000023811	exosc6	82	37.091	Takifugu_rubripes
ENSCPOG00000002371	-	100	40.293	ENSTNIG00000004018	exosc6	95	38.996	Tetraodon_nigroviridis
ENSCPOG00000002371	-	68	30.412	ENSTNIG00000008519	exosc4	74	30.412	Tetraodon_nigroviridis
ENSCPOG00000002371	-	67	30.366	ENSUAMG00000020173	EXOSC4	73	30.366	Ursus_americanus
ENSCPOG00000002371	-	67	30.366	ENSVVUG00000009675	EXOSC4	73	30.366	Vulpes_vulpes
ENSCPOG00000002371	-	98	51.079	ENSXETG00000007667	exosc6	94	50.183	Xenopus_tropicalis
ENSCPOG00000002371	-	100	39.583	ENSXCOG00000013623	exosc6	95	38.768	Xiphophorus_couchianus
ENSCPOG00000002371	-	68	32.143	ENSXCOG00000015017	exosc4	74	30.928	Xiphophorus_couchianus
ENSCPOG00000002371	-	68	32.143	ENSXMAG00000016287	exosc4	74	30.928	Xiphophorus_maculatus
ENSCPOG00000002371	-	100	39.236	ENSXMAG00000006280	exosc6	95	38.406	Xiphophorus_maculatus