EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002374 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 4791 bases
Position: chrDS562934.1:4514552-4519342
Accession: 100717622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002158	zf-C2H2	PF00096.26	4.5e-23	1	4
ENSCPOP00000002158	zf-C2H2	PF00096.26	4.5e-23	2	4
ENSCPOP00000002158	zf-C2H2	PF00096.26	4.5e-23	3	4
ENSCPOP00000002158	zf-C2H2	PF00096.26	4.5e-23	4	4
ENSCPOP00000002158	zf-met	PF12874.7	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002407	ZIC3-201	1925	XM_005008389	ENSCPOP00000002158	246 (aa)	XP_005008446	H0UYE8

Gene Model

Click here to download ENSCPOG00000002374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002374	ZIC3	70	34.940	ENSCPOG00000010143	GTF3A	81	34.940
ENSCPOG00000002374	ZIC3	53	37.615	ENSCPOG00000039249	ZNF784	52	35.000
ENSCPOG00000002374	ZIC3	73	36.364	ENSCPOG00000012883	PRDM5	87	40.741
ENSCPOG00000002374	ZIC3	67	41.818	ENSCPOG00000000634	ZFP1	65	41.818
ENSCPOG00000002374	ZIC3	59	40.690	ENSCPOG00000032242	-	66	40.690
ENSCPOG00000002374	ZIC3	67	41.818	ENSCPOG00000003954	ZNF317	68	41.818
ENSCPOG00000002374	ZIC3	66	41.818	ENSCPOG00000035563	-	86	41.818
ENSCPOG00000002374	ZIC3	89	46.903	ENSCPOG00000039731	ZNF235	76	46.903
ENSCPOG00000002374	ZIC3	68	43.820	ENSCPOG00000030357	ZNF319	65	43.820
ENSCPOG00000002374	ZIC3	64	43.529	ENSCPOG00000005238	ZNF768	54	43.529
ENSCPOG00000002374	ZIC3	67	46.018	ENSCPOG00000034004	-	77	46.018
ENSCPOG00000002374	ZIC3	60	42.727	ENSCPOG00000036704	-	59	42.727
ENSCPOG00000002374	ZIC3	76	42.857	ENSCPOG00000008424	ZNF236	50	41.739
ENSCPOG00000002374	ZIC3	68	46.364	ENSCPOG00000040740	ZNF226	65	47.748
ENSCPOG00000002374	ZIC3	65	46.835	ENSCPOG00000040579	ZNF865	70	36.154
ENSCPOG00000002374	ZIC3	75	35.714	ENSCPOG00000004622	ZBTB41	52	35.714
ENSCPOG00000002374	ZIC3	61	47.788	ENSCPOG00000033345	-	92	47.788
ENSCPOG00000002374	ZIC3	59	40.541	ENSCPOG00000035126	ZNF2	52	40.541
ENSCPOG00000002374	ZIC3	60	43.119	ENSCPOG00000031196	ZNF81	60	43.119
ENSCPOG00000002374	ZIC3	61	42.069	ENSCPOG00000034791	-	71	42.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002374	ZIC3	100	98.780	ENSG00000156925	ZIC3	53	98.780	Homo_sapiens
ENSCPOG00000002374	ZIC3	100	98.780	ENSANAG00000019614	ZIC3	53	98.780	Aotus_nancymaae
ENSCPOG00000002374	ZIC3	100	98.780	ENSCJAG00000013792	ZIC3	53	98.780	Callithrix_jacchus
ENSCPOG00000002374	ZIC3	100	98.780	ENSCAFG00000018979	ZIC3	53	98.780	Canis_familiaris
ENSCPOG00000002374	ZIC3	100	98.780	ENSTSYG00000003356	ZIC3	53	98.780	Carlito_syrichta
ENSCPOG00000002374	ZIC3	100	98.780	ENSCCAG00000025983	ZIC3	53	98.780	Cebus_capucinus
ENSCPOG00000002374	ZIC3	100	98.780	ENSCATG00000036569	ZIC3	53	98.780	Cercocebus_atys
ENSCPOG00000002374	ZIC3	100	98.780	ENSCLAG00000001934	ZIC3	53	98.780	Chinchilla_lanigera
ENSCPOG00000002374	ZIC3	97	93.361	ENSCPBG00000026115	ZIC3	58	93.173	Chrysemys_picta_bellii
ENSCPOG00000002374	ZIC3	100	98.780	ENSCANG00000017505	ZIC3	53	98.780	Colobus_angolensis_palliatus
ENSCPOG00000002374	ZIC3	100	98.374	ENSCGRG00001024527	Zic3	53	98.374	Cricetulus_griseus_chok1gshd
ENSCPOG00000002374	ZIC3	100	98.374	ENSDORG00000025481	Zic3	53	98.374	Dipodomys_ordii
ENSCPOG00000002374	ZIC3	100	98.780	ENSFCAG00000025684	ZIC3	53	98.780	Felis_catus
ENSCPOG00000002374	ZIC3	100	98.374	ENSFDAG00000014929	ZIC3	100	98.374	Fukomys_damarensis
ENSCPOG00000002374	ZIC3	100	98.780	ENSGGOG00000011914	ZIC3	53	98.780	Gorilla_gorilla
ENSCPOG00000002374	ZIC3	100	98.374	ENSHGLG00000006298	ZIC3	53	98.374	Heterocephalus_glaber_female
ENSCPOG00000002374	ZIC3	100	60.163	ENSHGLG00100002829	ZIC3	73	67.073	Heterocephalus_glaber_male
ENSCPOG00000002374	ZIC3	100	98.780	ENSJJAG00000022714	Zic3	53	98.780	Jaculus_jaculus
ENSCPOG00000002374	ZIC3	100	91.093	ENSLACG00000014597	ZIC3	56	91.093	Latimeria_chalumnae
ENSCPOG00000002374	ZIC3	100	97.154	ENSLAFG00000007048	ZIC3	64	97.154	Loxodonta_africana
ENSCPOG00000002374	ZIC3	100	98.780	ENSMFAG00000027018	ZIC3	53	98.780	Macaca_fascicularis
ENSCPOG00000002374	ZIC3	100	98.780	ENSMNEG00000040682	ZIC3	53	98.780	Macaca_nemestrina
ENSCPOG00000002374	ZIC3	100	98.780	ENSMLEG00000004378	ZIC3	53	98.780	Mandrillus_leucophaeus
ENSCPOG00000002374	ZIC3	100	98.374	ENSMAUG00000009402	Zic3	53	98.374	Mesocricetus_auratus
ENSCPOG00000002374	ZIC3	100	98.780	ENSMICG00000042529	ZIC3	53	98.780	Microcebus_murinus
ENSCPOG00000002374	ZIC3	100	98.374	ENSMOCG00000020544	Zic3	53	98.374	Microtus_ochrogaster
ENSCPOG00000002374	ZIC3	100	98.374	MGP_CAROLIEiJ_G0033101	Zic3	100	98.374	Mus_caroli
ENSCPOG00000002374	ZIC3	100	98.374	ENSMUSG00000067860	Zic3	100	98.374	Mus_musculus
ENSCPOG00000002374	ZIC3	100	98.374	MGP_PahariEiJ_G0031644	Zic3	100	98.374	Mus_pahari
ENSCPOG00000002374	ZIC3	100	98.374	MGP_SPRETEiJ_G0034256	Zic3	100	98.374	Mus_spretus
ENSCPOG00000002374	ZIC3	100	97.967	ENSNGAG00000023346	Zic3	53	97.967	Nannospalax_galili
ENSCPOG00000002374	ZIC3	100	98.374	ENSNLEG00000003005	-	68	98.374	Nomascus_leucogenys
ENSCPOG00000002374	ZIC3	100	98.780	ENSODEG00000005556	ZIC3	53	98.780	Octodon_degus
ENSCPOG00000002374	ZIC3	100	98.780	ENSPPAG00000030013	ZIC3	53	98.780	Pan_paniscus
ENSCPOG00000002374	ZIC3	100	98.374	ENSPPRG00000010839	ZIC3	53	98.374	Panthera_pardus
ENSCPOG00000002374	ZIC3	100	98.780	ENSPTRG00000043849	ZIC3	53	98.780	Pan_troglodytes
ENSCPOG00000002374	ZIC3	100	98.780	ENSPANG00000011357	ZIC3	53	98.780	Papio_anubis
ENSCPOG00000002374	ZIC3	100	86.640	ENSPKIG00000017705	zic3	55	86.640	Paramormyrops_kingsleyae
ENSCPOG00000002374	ZIC3	100	92.369	ENSPSIG00000011896	ZIC3	85	92.369	Pelodiscus_sinensis
ENSCPOG00000002374	ZIC3	100	98.374	ENSPEMG00000022168	Zic3	53	98.374	Peromyscus_maniculatus_bairdii
ENSCPOG00000002374	ZIC3	100	98.374	ENSPCOG00000021557	ZIC3	53	98.374	Propithecus_coquereli
ENSCPOG00000002374	ZIC3	100	98.374	ENSRNOG00000000861	Zic3	53	98.374	Rattus_norvegicus
ENSCPOG00000002374	ZIC3	100	98.780	ENSRBIG00000030660	ZIC3	53	98.780	Rhinopithecus_bieti
ENSCPOG00000002374	ZIC3	100	98.780	ENSRROG00000028410	ZIC3	53	98.780	Rhinopithecus_roxellana
ENSCPOG00000002374	ZIC3	100	98.780	ENSSBOG00000024684	ZIC3	53	98.780	Saimiri_boliviensis_boliviensis
ENSCPOG00000002374	ZIC3	100	85.425	ENSSFOG00015011731	zic3	55	85.425	Scleropages_formosus
ENSCPOG00000002374	ZIC3	100	87.045	ENSSFOG00015008079	zic3	62	87.045	Scleropages_formosus
ENSCPOG00000002374	ZIC3	95	90.598	ENSTGUG00000002155	ZIC3	64	89.243	Taeniopygia_guttata
ENSCPOG00000002374	ZIC3	100	98.780	ENSVVUG00000021378	ZIC3	53	98.780	Vulpes_vulpes
ENSCPOG00000002374	ZIC3	99	86.640	ENSXETG00000024458	zic3	56	86.640	Xenopus_tropicalis