EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000002396 (Gene tree)
Gene ID: 100735158
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 22443 bases
Position: chrDS562945.1:3264323-3286765
Accession: 100735158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023385	Nop52	PF05997.12	8.9e-69	1	1
ENSCPOP00000002179	Nop52	PF05997.12	2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000034249	RRP1B-201	4085	XM_003463924	ENSCPOP00000023385	719 (aa)	XP_003463972	A0A286XD61
ENSCPOT00000002429	RRP1B-202	3295	XM_013146099	ENSCPOP00000002179	658 (aa)	XP_013001553	H0UYG7

Gene Model

Click here to download ENSCPOG00000002396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002396	RRP1B	100	61.629	ENSG00000160208	RRP1B	100	61.629	Homo_sapiens
ENSCPOG00000002396	RRP1B	58	65.468	ENSAMEG00000011401	RRP1B	58	64.733	Ailuropoda_melanoleuca
ENSCPOG00000002396	RRP1B	51	46.842	ENSAMEG00000011448	RRP1	74	49.568	Ailuropoda_melanoleuca
ENSCPOG00000002396	RRP1B	61	48.649	ENSAOCG00000017894	-	94	49.315	Amphiprion_ocellaris
ENSCPOG00000002396	RRP1B	64	48.305	ENSATEG00000005045	-	52	48.305	Anabas_testudineus
ENSCPOG00000002396	RRP1B	73	52.023	ENSAPLG00000004310	RRP1B	84	52.647	Anas_platyrhynchos
ENSCPOG00000002396	RRP1B	99	39.406	ENSACAG00000017851	RRP1B	62	57.851	Anolis_carolinensis
ENSCPOG00000002396	RRP1B	100	61.992	ENSANAG00000034889	RRP1B	100	61.992	Aotus_nancymaae
ENSCPOG00000002396	RRP1B	100	57.656	ENSBTAG00000017418	RRP1B	100	57.600	Bos_taurus
ENSCPOG00000002396	RRP1B	55	44.691	ENSBTAG00000003981	RRP1	77	48.324	Bos_taurus
ENSCPOG00000002396	RRP1B	100	59.527	ENSCJAG00000017077	RRP1B	100	60.184	Callithrix_jacchus
ENSCPOG00000002396	RRP1B	51	48.787	ENSCJAG00000043205	RRP1	70	50.565	Callithrix_jacchus
ENSCPOG00000002396	RRP1B	50	46.774	ENSCAFG00000010646	RRP1	81	45.758	Canis_familiaris
ENSCPOG00000002396	RRP1B	100	57.391	ENSCAFG00000010621	RRP1B	99	58.757	Canis_familiaris
ENSCPOG00000002396	RRP1B	100	59.543	ENSCAFG00020018901	RRP1B	100	59.060	Canis_lupus_dingo
ENSCPOG00000002396	RRP1B	50	46.774	ENSCAFG00020018979	RRP1	75	48.603	Canis_lupus_dingo
ENSCPOG00000002396	RRP1B	52	45.833	ENSCHIG00000020948	RRP1	77	47.740	Capra_hircus
ENSCPOG00000002396	RRP1B	100	57.276	ENSCHIG00000021519	RRP1B	100	57.143	Capra_hircus
ENSCPOG00000002396	RRP1B	50	46.113	ENSTSYG00000012831	RRP1	80	46.113	Carlito_syrichta
ENSCPOG00000002396	RRP1B	100	61.337	ENSCCAG00000029384	RRP1B	100	61.337	Cebus_capucinus
ENSCPOG00000002396	RRP1B	62	44.053	ENSCCAG00000029828	RRP1	74	50.704	Cebus_capucinus
ENSCPOG00000002396	RRP1B	100	61.104	ENSCATG00000017423	RRP1B	100	61.104	Cercocebus_atys
ENSCPOG00000002396	RRP1B	51	45.430	ENSCLAG00000011639	RRP1	76	47.293	Chinchilla_lanigera
ENSCPOG00000002396	RRP1B	100	73.272	ENSCLAG00000005622	RRP1B	100	74.055	Chinchilla_lanigera
ENSCPOG00000002396	RRP1B	100	61.498	ENSCSAG00000007961	RRP1B	100	61.498	Chlorocebus_sabaeus
ENSCPOG00000002396	RRP1B	54	54.430	ENSCHOG00000002426	-	55	60.000	Choloepus_hoffmanni
ENSCPOG00000002396	RRP1B	99	47.066	ENSCPBG00000010310	RRP1B	98	46.164	Chrysemys_picta_bellii
ENSCPOG00000002396	RRP1B	100	61.104	ENSCANG00000040952	RRP1B	100	61.104	Colobus_angolensis_palliatus
ENSCPOG00000002396	RRP1B	64	41.901	ENSCGRG00001011920	Rrp1	77	48.824	Cricetulus_griseus_chok1gshd
ENSCPOG00000002396	RRP1B	100	58.995	ENSCGRG00001010889	-	100	58.995	Cricetulus_griseus_chok1gshd
ENSCPOG00000002396	RRP1B	100	58.598	ENSCGRG00001023882	-	100	58.598	Cricetulus_griseus_chok1gshd
ENSCPOG00000002396	RRP1B	64	41.901	ENSCGRG00000008915	Rrp1	77	48.824	Cricetulus_griseus_crigri
ENSCPOG00000002396	RRP1B	100	56.691	ENSCGRG00000001553	Rrp1b	97	57.703	Cricetulus_griseus_crigri
ENSCPOG00000002396	RRP1B	61	50.538	ENSCSEG00000020711	-	77	50.538	Cynoglossus_semilaevis
ENSCPOG00000002396	RRP1B	51	41.711	ENSCVAG00000017568	-	90	42.340	Cyprinodon_variegatus
ENSCPOG00000002396	RRP1B	60	45.309	ENSDNOG00000019880	RRP1	75	51.744	Dasypus_novemcinctus
ENSCPOG00000002396	RRP1B	100	55.878	ENSDNOG00000032774	RRP1B	100	55.878	Dasypus_novemcinctus
ENSCPOG00000002396	RRP1B	100	53.219	ENSDORG00000005496	Rrp1b	100	55.977	Dipodomys_ordii
ENSCPOG00000002396	RRP1B	100	51.459	ENSETEG00000019489	RRP1B	100	51.926	Echinops_telfairi
ENSCPOG00000002396	RRP1B	51	46.113	ENSEASG00005001673	RRP1	77	48.045	Equus_asinus_asinus
ENSCPOG00000002396	RRP1B	100	61.316	ENSEASG00005001687	RRP1B	100	60.658	Equus_asinus_asinus
ENSCPOG00000002396	RRP1B	52	44.792	ENSECAG00000015703	RRP1	77	48.588	Equus_caballus
ENSCPOG00000002396	RRP1B	100	61.053	ENSECAG00000018018	RRP1B	100	60.395	Equus_caballus
ENSCPOG00000002396	RRP1B	66	51.261	ENSELUG00000015885	-	94	43.750	Esox_lucius
ENSCPOG00000002396	RRP1B	100	59.947	ENSFCAG00000010272	RRP1B	100	59.704	Felis_catus
ENSCPOG00000002396	RRP1B	52	45.789	ENSFCAG00000008434	RRP1	75	48.148	Felis_catus
ENSCPOG00000002396	RRP1B	100	70.404	ENSFDAG00000010899	RRP1B	96	70.000	Fukomys_damarensis
ENSCPOG00000002396	RRP1B	51	45.380	ENSFDAG00000013728	RRP1	75	47.143	Fukomys_damarensis
ENSCPOG00000002396	RRP1B	100	33.626	ENSFHEG00000016314	-	74	41.333	Fundulus_heteroclitus
ENSCPOG00000002396	RRP1B	65	51.456	ENSGMOG00000001953	-	66	49.515	Gadus_morhua
ENSCPOG00000002396	RRP1B	100	35.318	ENSGACG00000001438	rrp1	100	34.683	Gasterosteus_aculeatus
ENSCPOG00000002396	RRP1B	100	45.904	ENSGAGG00000000375	RRP1B	100	46.164	Gopherus_agassizii
ENSCPOG00000002396	RRP1B	100	61.629	ENSGGOG00000012069	RRP1B	100	61.629	Gorilla_gorilla
ENSCPOG00000002396	RRP1B	99	74.761	ENSHGLG00000004968	RRP1B	100	75.443	Heterocephalus_glaber_female
ENSCPOG00000002396	RRP1B	98	78.592	ENSHGLG00100002232	RRP1B	90	78.426	Heterocephalus_glaber_male
ENSCPOG00000002396	RRP1B	68	43.478	ENSHCOG00000018388	-	59	42.029	Hippocampus_comes
ENSCPOG00000002396	RRP1B	62	45.000	ENSIPUG00000000673	-	67	42.450	Ictalurus_punctatus
ENSCPOG00000002396	RRP1B	50	46.556	ENSSTOG00000011116	RRP1	75	48.824	Ictidomys_tridecemlineatus
ENSCPOG00000002396	RRP1B	99	64.547	ENSSTOG00000011790	RRP1B	96	64.793	Ictidomys_tridecemlineatus
ENSCPOG00000002396	RRP1B	100	56.168	ENSJJAG00000021279	Rrp1b	100	56.974	Jaculus_jaculus
ENSCPOG00000002396	RRP1B	62	47.200	ENSKMAG00000005539	rrp1	71	44.262	Kryptolebias_marmoratus
ENSCPOG00000002396	RRP1B	99	38.645	ENSLACG00000017332	-	99	37.714	Latimeria_chalumnae
ENSCPOG00000002396	RRP1B	65	52.066	ENSLOCG00000004064	-	73	46.281	Lepisosteus_oculatus
ENSCPOG00000002396	RRP1B	53	46.366	ENSLAFG00000022901	RRP1	92	45.278	Loxodonta_africana
ENSCPOG00000002396	RRP1B	96	52.950	ENSLAFG00000000766	RRP1B	93	61.663	Loxodonta_africana
ENSCPOG00000002396	RRP1B	100	61.367	ENSMFAG00000039152	RRP1B	100	61.367	Macaca_fascicularis
ENSCPOG00000002396	RRP1B	100	59.527	ENSMMUG00000000104	RRP1B	100	59.527	Macaca_mulatta
ENSCPOG00000002396	RRP1B	100	61.235	ENSMNEG00000034269	RRP1B	100	61.235	Macaca_nemestrina
ENSCPOG00000002396	RRP1B	100	59.000	ENSMLEG00000040044	RRP1B	99	60.028	Mandrillus_leucophaeus
ENSCPOG00000002396	RRP1B	100	56.441	ENSMAUG00000021508	Rrp1b	100	56.707	Mesocricetus_auratus
ENSCPOG00000002396	RRP1B	56	36.650	ENSMAUG00000017653	Rrp1	74	40.936	Mesocricetus_auratus
ENSCPOG00000002396	RRP1B	100	64.171	ENSMICG00000004686	RRP1B	100	64.439	Microcebus_murinus
ENSCPOG00000002396	RRP1B	58	44.725	ENSMICG00000004700	RRP1	78	49.296	Microcebus_murinus
ENSCPOG00000002396	RRP1B	100	56.897	ENSMOCG00000001117	Rrp1b	100	57.560	Microtus_ochrogaster
ENSCPOG00000002396	RRP1B	50	37.363	ENSMMOG00000019175	rrp1	89	37.892	Mola_mola
ENSCPOG00000002396	RRP1B	100	53.585	ENSMODG00000021033	RRP1B	100	54.297	Monodelphis_domestica
ENSCPOG00000002396	RRP1B	51	44.474	ENSMALG00000010310	rrp1	91	45.278	Monopterus_albus
ENSCPOG00000002396	RRP1B	100	57.162	MGP_CAROLIEiJ_G0021376	Rrp1b	100	57.162	Mus_caroli
ENSCPOG00000002396	RRP1B	55	52.766	MGP_CAROLIEiJ_G0015508	Rrp1	81	40.695	Mus_caroli
ENSCPOG00000002396	RRP1B	100	56.233	ENSMUSG00000058392	Rrp1b	100	55.703	Mus_musculus
ENSCPOG00000002396	RRP1B	100	56.649	MGP_PahariEiJ_G0023695	Rrp1b	100	57.048	Mus_pahari
ENSCPOG00000002396	RRP1B	51	52.016	MGP_PahariEiJ_G0030921	Rrp1	59	52.016	Mus_pahari
ENSCPOG00000002396	RRP1B	100	55.968	MGP_SPRETEiJ_G0022290	Rrp1b	100	55.836	Mus_spretus
ENSCPOG00000002396	RRP1B	51	43.198	ENSMPUG00000009826	RRP1	81	43.609	Mustela_putorius_furo
ENSCPOG00000002396	RRP1B	92	55.167	ENSMPUG00000009810	RRP1B	99	54.213	Mustela_putorius_furo
ENSCPOG00000002396	RRP1B	50	58.222	ENSMLUG00000017788	RRP1	81	42.410	Myotis_lucifugus
ENSCPOG00000002396	RRP1B	99	59.921	ENSMLUG00000007738	RRP1B	99	59.396	Myotis_lucifugus
ENSCPOG00000002396	RRP1B	100	58.995	ENSNGAG00000021073	Rrp1b	100	59.680	Nannospalax_galili
ENSCPOG00000002396	RRP1B	100	60.748	ENSNLEG00000001490	RRP1B	100	60.748	Nomascus_leucogenys
ENSCPOG00000002396	RRP1B	89	84.746	ENSMEUG00000003226	-	89	84.746	Notamacropus_eugenii
ENSCPOG00000002396	RRP1B	50	41.436	ENSOPRG00000001319	RRP1	91	45.015	Ochotona_princeps
ENSCPOG00000002396	RRP1B	100	70.233	ENSODEG00000013177	RRP1B	100	70.096	Octodon_degus
ENSCPOG00000002396	RRP1B	99	48.485	ENSOANG00000006470	RRP1B	99	49.474	Ornithorhynchus_anatinus
ENSCPOG00000002396	RRP1B	100	51.603	ENSOCUG00000025931	RRP1B	100	52.312	Oryctolagus_cuniculus
ENSCPOG00000002396	RRP1B	68	54.878	ENSORLG00020007199	-	52	54.878	Oryzias_latipes_hni
ENSCPOG00000002396	RRP1B	74	43.548	ENSORLG00015004425	-	54	48.000	Oryzias_latipes_hsok
ENSCPOG00000002396	RRP1B	61	56.790	ENSOMEG00000016910	-	55	56.790	Oryzias_melastigma
ENSCPOG00000002396	RRP1B	50	46.849	ENSOGAG00000006105	RRP1	77	48.127	Otolemur_garnettii
ENSCPOG00000002396	RRP1B	77	66.197	ENSOGAG00000009872	RRP1B	87	65.414	Otolemur_garnettii
ENSCPOG00000002396	RRP1B	100	54.136	ENSOARG00000011314	RRP1B	100	55.446	Ovis_aries
ENSCPOG00000002396	RRP1B	100	59.286	ENSPPAG00000035319	RRP1B	99	60.223	Pan_paniscus
ENSCPOG00000002396	RRP1B	100	58.000	ENSPPRG00000010356	RRP1B	100	58.333	Panthera_pardus
ENSCPOG00000002396	RRP1B	52	45.767	ENSPPRG00000010656	RRP1	92	40.781	Panthera_pardus
ENSCPOG00000002396	RRP1B	86	72.727	ENSPTIG00000016894	RRP1B	88	71.970	Panthera_tigris_altaica
ENSCPOG00000002396	RRP1B	100	61.629	ENSPTRG00000013958	RRP1B	100	61.629	Pan_troglodytes
ENSCPOG00000002396	RRP1B	100	60.972	ENSPANG00000011090	RRP1B	100	61.367	Papio_anubis
ENSCPOG00000002396	RRP1B	50	47.826	ENSPANG00000015097	RRP1	73	50.291	Papio_anubis
ENSCPOG00000002396	RRP1B	66	52.212	ENSPKIG00000003422	-	57	52.212	Paramormyrops_kingsleyae
ENSCPOG00000002396	RRP1B	99	46.134	ENSPSIG00000008152	RRP1B	96	47.013	Pelodiscus_sinensis
ENSCPOG00000002396	RRP1B	100	59.176	ENSPEMG00000022490	Rrp1b	100	58.910	Peromyscus_maniculatus_bairdii
ENSCPOG00000002396	RRP1B	56	42.686	ENSPEMG00000018421	Rrp1	88	44.924	Peromyscus_maniculatus_bairdii
ENSCPOG00000002396	RRP1B	63	45.279	ENSPCIG00000015523	-	77	52.958	Phascolarctos_cinereus
ENSCPOG00000002396	RRP1B	100	54.545	ENSPCIG00000015513	RRP1B	100	55.253	Phascolarctos_cinereus
ENSCPOG00000002396	RRP1B	63	40.087	ENSPLAG00000016684	-	50	44.633	Poecilia_latipinna
ENSCPOG00000002396	RRP1B	78	44.030	ENSPMEG00000007042	-	53	52.632	Poecilia_mexicana
ENSCPOG00000002396	RRP1B	73	43.935	ENSPREG00000015673	-	53	53.763	Poecilia_reticulata
ENSCPOG00000002396	RRP1B	100	61.761	ENSPPYG00000011470	RRP1B	100	61.761	Pongo_abelii
ENSCPOG00000002396	RRP1B	90	82.051	ENSPCAG00000013723	RRP1B	91	85.263	Procavia_capensis
ENSCPOG00000002396	RRP1B	100	64.651	ENSPCOG00000017927	RRP1B	100	64.785	Propithecus_coquereli
ENSCPOG00000002396	RRP1B	99	53.088	ENSPVAG00000001436	RRP1B	99	54.485	Pteropus_vampyrus
ENSCPOG00000002396	RRP1B	100	58.322	ENSRNOG00000001194	Rrp1b	100	58.056	Rattus_norvegicus
ENSCPOG00000002396	RRP1B	100	58.081	ENSRBIG00000041689	RRP1B	100	58.081	Rhinopithecus_bieti
ENSCPOG00000002396	RRP1B	100	61.498	ENSRROG00000031499	RRP1B	100	61.498	Rhinopithecus_roxellana
ENSCPOG00000002396	RRP1B	51	48.649	ENSSBOG00000034689	RRP1	75	50.430	Saimiri_boliviensis_boliviensis
ENSCPOG00000002396	RRP1B	100	56.121	ENSSBOG00000034727	RRP1B	99	57.718	Saimiri_boliviensis_boliviensis
ENSCPOG00000002396	RRP1B	100	54.581	ENSSHAG00000017789	RRP1B	100	55.294	Sarcophilus_harrisii
ENSCPOG00000002396	RRP1B	61	50.442	ENSSFOG00015003932	-	57	50.442	Scleropages_formosus
ENSCPOG00000002396	RRP1B	68	45.588	ENSSMAG00000016847	-	85	43.407	Scophthalmus_maximus
ENSCPOG00000002396	RRP1B	69	46.512	ENSSDUG00000000551	-	57	43.750	Seriola_dumerili
ENSCPOG00000002396	RRP1B	69	46.512	ENSSLDG00000002538	-	53	43.750	Seriola_lalandi_dorsalis
ENSCPOG00000002396	RRP1B	80	56.604	ENSSARG00000003108	-	75	58.099	Sorex_araneus
ENSCPOG00000002396	RRP1B	100	42.474	ENSSPUG00000002834	RRP1B	100	41.740	Sphenodon_punctatus
ENSCPOG00000002396	RRP1B	66	46.457	ENSSPAG00000005370	-	51	46.457	Stegastes_partitus
ENSCPOG00000002396	RRP1B	52	46.277	ENSSSCG00000037061	RRP1	76	47.863	Sus_scrofa
ENSCPOG00000002396	RRP1B	100	54.692	ENSSSCG00000021698	RRP1B	100	56.199	Sus_scrofa
ENSCPOG00000002396	RRP1B	83	38.312	ENSTNIG00000005053	rrp1	80	43.056	Tetraodon_nigroviridis
ENSCPOG00000002396	RRP1B	83	69.113	ENSTBEG00000000422	RRP1B	96	73.418	Tupaia_belangeri
ENSCPOG00000002396	RRP1B	100	55.480	ENSTTRG00000000723	RRP1B	100	55.870	Tursiops_truncatus
ENSCPOG00000002396	RRP1B	100	58.719	ENSUAMG00000026765	RRP1B	100	58.687	Ursus_americanus
ENSCPOG00000002396	RRP1B	69	72.519	ENSUMAG00000025510	RRP1B	92	70.992	Ursus_maritimus
ENSCPOG00000002396	RRP1B	100	57.742	ENSVVUG00000024509	RRP1B	99	58.006	Vulpes_vulpes
ENSCPOG00000002396	RRP1B	64	43.902	ENSXETG00000013683	rrp1b	73	43.109	Xenopus_tropicalis
ENSCPOG00000002396	RRP1B	67	41.855	ENSXMAG00000023123	-	58	48.980	Xiphophorus_maculatus