EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002648 (Gene tree)
Gene ID: 100728101
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 62428 bases
Position: chrDS562969.1:1055616-1118043
Accession: 100728101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022876	PAP_RNA-bind	PF04926.15	4.4e-25	1	1
ENSCPOP00000027749	PAP_RNA-bind	PF04926.15	4.7e-25	1	1
ENSCPOP00000032484	PAP_RNA-bind	PF04926.15	4.4e-23	1	1
ENSCPOP00000002406	PAP_RNA-bind	PF04926.15	4.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002682	PAPOLA-201	2136	XM_013144847	ENSCPOP00000002406	711 (aa)	-	H0UZ14
ENSCPOT00000047212	PAPOLA-203	1998	-	ENSCPOP00000027749	665 (aa)	-	A0A286XQV4
ENSCPOT00000046958	PAPOLA-205	771	-	ENSCPOP00000022458	256 (aa)	-	A0A286XAK0
ENSCPOT00000041341	PAPOLA-202	2073	-	ENSCPOP00000022876	690 (aa)	-	A0A286XBU7
ENSCPOT00000039703	PAPOLA-204	2109	-	ENSCPOP00000032484	702 (aa)	-	A0A286Y440

Gene Model

Click here to download ENSCPOG00000002648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002648	PAPOLA	76	81.890	ENSCPOG00000021527	PAPOLB	90	81.890
ENSCPOG00000002648	PAPOLA	98	57.909	ENSCPOG00000010306	PAPOLG	99	57.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002648	PAPOLA	100	93.826	ENSG00000090060	PAPOLA	100	96.632	Homo_sapiens
ENSCPOG00000002648	PAPOLA	99	93.360	ENSAMEG00000014142	PAPOLA	99	93.360	Ailuropoda_melanoleuca
ENSCPOG00000002648	PAPOLA	99	87.534	ENSAPLG00000006645	PAPOLA	99	87.534	Anas_platyrhynchos
ENSCPOG00000002648	PAPOLA	99	87.821	ENSACAG00000013474	PAPOLA	99	90.895	Anolis_carolinensis
ENSCPOG00000002648	PAPOLA	76	86.330	ENSANAG00000027941	-	98	86.330	Aotus_nancymaae
ENSCPOG00000002648	PAPOLA	100	93.557	ENSANAG00000018274	PAPOLA	100	93.777	Aotus_nancymaae
ENSCPOG00000002648	PAPOLA	100	69.814	ENSAMXG00000018141	papola	99	80.431	Astyanax_mexicanus
ENSCPOG00000002648	PAPOLA	100	93.506	ENSBTAG00000004054	PAPOLA	100	93.506	Bos_taurus
ENSCPOG00000002648	PAPOLA	100	93.562	ENSCJAG00000006512	PAPOLA	100	93.562	Callithrix_jacchus
ENSCPOG00000002648	PAPOLA	100	92.752	ENSCAFG00000017783	PAPOLA	100	92.752	Canis_familiaris
ENSCPOG00000002648	PAPOLA	100	93.315	ENSCAFG00020011550	PAPOLA	100	93.315	Canis_lupus_dingo
ENSCPOG00000002648	PAPOLA	100	92.828	ENSCHIG00000025004	-	100	92.828	Capra_hircus
ENSCPOG00000002648	PAPOLA	99	92.754	ENSTSYG00000012384	PAPOLA	99	92.754	Carlito_syrichta
ENSCPOG00000002648	PAPOLA	100	93.557	ENSCCAG00000025120	PAPOLA	100	93.557	Cebus_capucinus
ENSCPOG00000002648	PAPOLA	100	93.691	ENSCATG00000018815	PAPOLA	100	93.691	Cercocebus_atys
ENSCPOG00000002648	PAPOLA	100	95.670	ENSCLAG00000016342	PAPOLA	100	95.670	Chinchilla_lanigera
ENSCPOG00000002648	PAPOLA	100	93.691	ENSCSAG00000010516	PAPOLA	100	93.691	Chlorocebus_sabaeus
ENSCPOG00000002648	PAPOLA	71	82.834	ENSCHOG00000001115	PAPOLA	72	82.834	Choloepus_hoffmanni
ENSCPOG00000002648	PAPOLA	100	88.919	ENSCPBG00000024125	PAPOLA	100	88.919	Chrysemys_picta_bellii
ENSCPOG00000002648	PAPOLA	99	88.425	ENSCANG00000000159	PAPOLA	100	88.425	Colobus_angolensis_palliatus
ENSCPOG00000002648	PAPOLA	100	93.362	ENSCGRG00001022693	-	100	93.362	Cricetulus_griseus_chok1gshd
ENSCPOG00000002648	PAPOLA	99	86.415	ENSCGRG00001002732	-	99	86.415	Cricetulus_griseus_chok1gshd
ENSCPOG00000002648	PAPOLA	100	85.832	ENSCGRG00001000229	-	99	86.885	Cricetulus_griseus_chok1gshd
ENSCPOG00000002648	PAPOLA	98	77.548	ENSCGRG00000001888	-	96	76.860	Cricetulus_griseus_crigri
ENSCPOG00000002648	PAPOLA	100	80.737	ENSCGRG00000000257	-	100	80.737	Cricetulus_griseus_crigri
ENSCPOG00000002648	PAPOLA	99	93.333	ENSCGRG00000003664	-	100	93.333	Cricetulus_griseus_crigri
ENSCPOG00000002648	PAPOLA	68	50.417	ENSCSEG00000001841	-	71	50.417	Cynoglossus_semilaevis
ENSCPOG00000002648	PAPOLA	100	68.091	ENSDARG00000009585	papola	100	67.906	Danio_rerio
ENSCPOG00000002648	PAPOLA	68	89.407	ENSDORG00000013415	-	100	90.678	Dipodomys_ordii
ENSCPOG00000002648	PAPOLA	99	84.261	ENSETEG00000004889	PAPOLA	100	84.261	Echinops_telfairi
ENSCPOG00000002648	PAPOLA	100	65.517	ENSELUG00000018972	papola	100	65.513	Esox_lucius
ENSCPOG00000002648	PAPOLA	100	94.084	ENSFCAG00000006784	PAPOLA	100	94.084	Felis_catus
ENSCPOG00000002648	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	91	93.750	Ficedula_albicollis
ENSCPOG00000002648	PAPOLA	99	93.623	ENSFDAG00000010370	PAPOLA	100	93.623	Fukomys_damarensis
ENSCPOG00000002648	PAPOLA	76	66.362	ENSGMOG00000010209	papola	100	66.728	Gadus_morhua
ENSCPOG00000002648	PAPOLA	100	86.757	ENSGALG00000033099	PAPOLA	100	86.757	Gallus_gallus
ENSCPOG00000002648	PAPOLA	68	50.625	ENSGACG00000006142	-	100	50.000	Gasterosteus_aculeatus
ENSCPOG00000002648	PAPOLA	95	90.785	ENSGAGG00000020500	PAPOLA	99	90.785	Gopherus_agassizii
ENSCPOG00000002648	PAPOLA	100	93.826	ENSGGOG00000006287	PAPOLA	100	93.826	Gorilla_gorilla
ENSCPOG00000002648	PAPOLA	100	94.723	ENSHGLG00000007909	-	100	94.723	Heterocephalus_glaber_female
ENSCPOG00000002648	PAPOLA	100	80.872	ENSHGLG00000007467	-	100	80.618	Heterocephalus_glaber_female
ENSCPOG00000002648	PAPOLA	99	82.698	ENSHGLG00000017457	-	100	81.744	Heterocephalus_glaber_female
ENSCPOG00000002648	PAPOLA	100	94.587	ENSHGLG00100017273	PAPOLA	100	94.587	Heterocephalus_glaber_male
ENSCPOG00000002648	PAPOLA	100	64.810	ENSIPUG00000005919	papola	100	64.304	Ictalurus_punctatus
ENSCPOG00000002648	PAPOLA	100	93.939	ENSSTOG00000011471	PAPOLA	100	93.939	Ictidomys_tridecemlineatus
ENSCPOG00000002648	PAPOLA	99	92.899	ENSJJAG00000024340	Papola	100	92.899	Jaculus_jaculus
ENSCPOG00000002648	PAPOLA	99	73.414	ENSLACG00000018136	PAPOLA	99	73.414	Latimeria_chalumnae
ENSCPOG00000002648	PAPOLA	99	63.003	ENSLOCG00000008632	papola	99	63.003	Lepisosteus_oculatus
ENSCPOG00000002648	PAPOLA	99	92.799	ENSLAFG00000000946	PAPOLA	99	92.799	Loxodonta_africana
ENSCPOG00000002648	PAPOLA	100	93.691	ENSMFAG00000001792	PAPOLA	100	93.691	Macaca_fascicularis
ENSCPOG00000002648	PAPOLA	100	93.691	ENSMMUG00000018610	PAPOLA	100	93.691	Macaca_mulatta
ENSCPOG00000002648	PAPOLA	100	93.691	ENSMNEG00000043747	PAPOLA	100	93.691	Macaca_nemestrina
ENSCPOG00000002648	PAPOLA	100	93.691	ENSMLEG00000032066	PAPOLA	100	93.691	Mandrillus_leucophaeus
ENSCPOG00000002648	PAPOLA	87	89.871	ENSMGAG00000013228	-	100	89.871	Meleagris_gallopavo
ENSCPOG00000002648	PAPOLA	100	93.795	ENSMAUG00000017178	Papola	100	93.795	Mesocricetus_auratus
ENSCPOG00000002648	PAPOLA	100	94.290	ENSMICG00000010347	PAPOLA	100	94.290	Microcebus_murinus
ENSCPOG00000002648	PAPOLA	100	93.506	ENSMOCG00000021670	Papola	100	93.506	Microtus_ochrogaster
ENSCPOG00000002648	PAPOLA	99	78.984	ENSMODG00000001969	-	99	79.126	Monodelphis_domestica
ENSCPOG00000002648	PAPOLA	100	92.016	ENSMODG00000012887	-	100	92.016	Monodelphis_domestica
ENSCPOG00000002648	PAPOLA	100	92.208	MGP_CAROLIEiJ_G0018093	Papola	100	93.478	Mus_caroli
ENSCPOG00000002648	PAPOLA	100	92.496	ENSMUSG00000021111	Papola	99	94.099	Mus_musculus
ENSCPOG00000002648	PAPOLA	100	92.496	MGP_PahariEiJ_G0029850	Papola	100	94.099	Mus_pahari
ENSCPOG00000002648	PAPOLA	100	92.641	MGP_SPRETEiJ_G0018943	Papola	100	94.410	Mus_spretus
ENSCPOG00000002648	PAPOLA	100	93.640	ENSMPUG00000003054	PAPOLA	100	93.640	Mustela_putorius_furo
ENSCPOG00000002648	PAPOLA	100	91.610	ENSMLUG00000010922	PAPOLA	100	91.610	Myotis_lucifugus
ENSCPOG00000002648	PAPOLA	100	92.496	ENSNGAG00000022172	Papola	100	92.496	Nannospalax_galili
ENSCPOG00000002648	PAPOLA	99	88.564	ENSNLEG00000000625	PAPOLA	100	88.564	Nomascus_leucogenys
ENSCPOG00000002648	PAPOLA	69	87.121	ENSMEUG00000007831	-	74	86.614	Notamacropus_eugenii
ENSCPOG00000002648	PAPOLA	97	88.211	ENSOPRG00000007625	PAPOLA	100	88.211	Ochotona_princeps
ENSCPOG00000002648	PAPOLA	67	50.000	ENSONIG00000001062	-	96	50.000	Oreochromis_niloticus
ENSCPOG00000002648	PAPOLA	99	92.330	ENSOANG00000013812	PAPOLA	99	92.330	Ornithorhynchus_anatinus
ENSCPOG00000002648	PAPOLA	99	90.502	ENSOCUG00000011531	PAPOLA	99	90.502	Oryctolagus_cuniculus
ENSCPOG00000002648	PAPOLA	100	93.514	ENSOGAG00000004611	PAPOLA	100	93.514	Otolemur_garnettii
ENSCPOG00000002648	PAPOLA	100	93.099	ENSOARG00000016579	-	100	93.099	Ovis_aries
ENSCPOG00000002648	PAPOLA	100	93.826	ENSPPAG00000030505	PAPOLA	100	93.826	Pan_paniscus
ENSCPOG00000002648	PAPOLA	100	94.011	ENSPPRG00000008616	PAPOLA	100	94.011	Panthera_pardus
ENSCPOG00000002648	PAPOLA	99	93.986	ENSPTIG00000018852	PAPOLA	99	93.986	Panthera_tigris_altaica
ENSCPOG00000002648	PAPOLA	100	93.826	ENSPTRG00000006704	PAPOLA	100	93.826	Pan_troglodytes
ENSCPOG00000002648	PAPOLA	100	93.691	ENSPANG00000025582	PAPOLA	100	93.691	Papio_anubis
ENSCPOG00000002648	PAPOLA	100	66.797	ENSPKIG00000014471	papola	100	67.582	Paramormyrops_kingsleyae
ENSCPOG00000002648	PAPOLA	100	89.189	ENSPSIG00000014157	PAPOLA	87	89.189	Pelodiscus_sinensis
ENSCPOG00000002648	PAPOLA	100	93.362	ENSPEMG00000000043	Papola	100	93.362	Peromyscus_maniculatus_bairdii
ENSCPOG00000002648	PAPOLA	100	91.622	ENSPCIG00000013234	PAPOLA	100	91.622	Phascolarctos_cinereus
ENSCPOG00000002648	PAPOLA	100	93.956	ENSPPYG00000006128	PAPOLA	100	93.956	Pongo_abelii
ENSCPOG00000002648	PAPOLA	88	89.809	ENSPCAG00000004199	PAPOLA	96	89.809	Procavia_capensis
ENSCPOG00000002648	PAPOLA	99	90.642	ENSPCOG00000022117	PAPOLA	99	90.642	Propithecus_coquereli
ENSCPOG00000002648	PAPOLA	100	92.287	ENSPVAG00000013925	PAPOLA	100	92.287	Pteropus_vampyrus
ENSCPOG00000002648	PAPOLA	100	68.547	ENSPNAG00000010467	papola	100	68.697	Pygocentrus_nattereri
ENSCPOG00000002648	PAPOLA	100	91.069	ENSRNOG00000004827	Papola	100	91.069	Rattus_norvegicus
ENSCPOG00000002648	PAPOLA	99	92.683	ENSRBIG00000038490	PAPOLA	100	92.683	Rhinopithecus_bieti
ENSCPOG00000002648	PAPOLA	100	93.557	ENSRROG00000025545	PAPOLA	100	93.557	Rhinopithecus_roxellana
ENSCPOG00000002648	PAPOLA	99	93.400	ENSSBOG00000024061	PAPOLA	100	93.400	Saimiri_boliviensis_boliviensis
ENSCPOG00000002648	PAPOLA	99	91.848	ENSSHAG00000015211	PAPOLA	99	91.848	Sarcophilus_harrisii
ENSCPOG00000002648	PAPOLA	100	67.287	ENSSFOG00015004431	papola	99	80.108	Scleropages_formosus
ENSCPOG00000002648	PAPOLA	97	44.868	ENSSDUG00000018247	-	97	44.949	Seriola_dumerili
ENSCPOG00000002648	PAPOLA	100	88.649	ENSSPUG00000005835	PAPOLA	100	88.649	Sphenodon_punctatus
ENSCPOG00000002648	PAPOLA	100	93.795	ENSSSCG00000002505	-	100	93.795	Sus_scrofa
ENSCPOG00000002648	PAPOLA	99	87.110	ENSTGUG00000012687	PAPOLA	99	87.110	Taeniopygia_guttata
ENSCPOG00000002648	PAPOLA	73	86.127	ENSTBEG00000000194	PAPOLA	75	86.127	Tupaia_belangeri
ENSCPOG00000002648	PAPOLA	78	96.875	ENSTTRG00000005717	PAPOLA	80	94.805	Tursiops_truncatus
ENSCPOG00000002648	PAPOLA	59	92.180	ENSUAMG00000025737	PAPOLA	98	92.180	Ursus_americanus
ENSCPOG00000002648	PAPOLA	99	92.799	ENSVPAG00000006464	PAPOLA	100	92.799	Vicugna_pacos
ENSCPOG00000002648	PAPOLA	100	93.795	ENSVVUG00000028340	PAPOLA	100	93.795	Vulpes_vulpes
ENSCPOG00000002648	PAPOLA	100	79.082	ENSXETG00000013949	papola	100	79.082	Xenopus_tropicalis