EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002757 (Gene tree)
Gene ID: 100713607
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 33853 bases
Position: chrDS562857.1:57664326-57698178
Accession: 100713607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002503	KH_1	PF00013.29	1.6e-69	1	4
ENSCPOP00000002503	KH_1	PF00013.29	1.6e-69	2	4
ENSCPOP00000002503	KH_1	PF00013.29	1.6e-69	3	4
ENSCPOP00000002503	KH_1	PF00013.29	1.6e-69	4	4
ENSCPOP00000023216	KH_1	PF00013.29	6.3e-17	1	1
ENSCPOP00000002503	KH_2	PF07650.17	1.7e-22	1	2
ENSCPOP00000002503	KH_2	PF07650.17	1.7e-22	2	2
ENSCPOP00000023216	KH_2	PF07650.17	1.7e-06	1	1
ENSCPOP00000002503	DUF1897	PF09005.10	8e-12	1	2
ENSCPOP00000002503	DUF1897	PF09005.10	8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000044581	FUBP1-202	450	-	ENSCPOP00000023216	149 (aa)	-	A0A286XCP3
ENSCPOT00000002792	FUBP1-201	6766	XM_003479079	ENSCPOP00000002503	658 (aa)	XP_003479127	H0UZA4

Gene Model

Click here to download ENSCPOG00000002757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002757	FUBP1	93	53.440	ENSCPOG00000010315	FUBP3	84	65.509
ENSCPOG00000002757	FUBP1	58	34.524	ENSCPOG00000014617	PCBP4	74	34.524
ENSCPOG00000002757	FUBP1	53	32.258	ENSCPOG00000003648	PCBP3	66	30.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002757	FUBP1	100	98.632	ENSG00000162613	FUBP1	100	98.632	Homo_sapiens
ENSCPOG00000002757	FUBP1	100	69.069	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSCPOG00000002757	FUBP1	100	97.987	ENSAMEG00000007372	FUBP1	99	95.366	Ailuropoda_melanoleuca
ENSCPOG00000002757	FUBP1	98	70.946	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSCPOG00000002757	FUBP1	98	70.946	ENSAPEG00000012232	fubp1	72	76.638	Amphiprion_percula
ENSCPOG00000002757	FUBP1	99	71.212	ENSATEG00000018619	fubp1	70	78.194	Anabas_testudineus
ENSCPOG00000002757	FUBP1	98	96.599	ENSAPLG00000005965	FUBP1	100	97.030	Anas_platyrhynchos
ENSCPOG00000002757	FUBP1	98	95.918	ENSACAG00000006310	FUBP1	96	87.191	Anolis_carolinensis
ENSCPOG00000002757	FUBP1	98	71.145	ENSACLG00000006708	fubp1	72	77.753	Astatotilapia_calliptera
ENSCPOG00000002757	FUBP1	100	78.000	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSCPOG00000002757	FUBP1	100	98.480	ENSCJAG00000007062	FUBP1	100	98.480	Callithrix_jacchus
ENSCPOG00000002757	FUBP1	100	97.987	ENSCAFG00000020361	FUBP1	99	98.762	Canis_familiaris
ENSCPOG00000002757	FUBP1	100	97.315	ENSTSYG00000000148	FUBP1	100	98.382	Carlito_syrichta
ENSCPOG00000002757	FUBP1	57	98.901	ENSCAPG00000011052	-	67	98.901	Cavia_aperea
ENSCPOG00000002757	FUBP1	100	96.324	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSCPOG00000002757	FUBP1	100	98.480	ENSCATG00000042126	FUBP1	100	98.480	Cercocebus_atys
ENSCPOG00000002757	FUBP1	100	99.240	ENSCLAG00000005621	FUBP1	100	99.359	Chinchilla_lanigera
ENSCPOG00000002757	FUBP1	100	97.987	ENSCSAG00000001402	FUBP1	99	98.607	Chlorocebus_sabaeus
ENSCPOG00000002757	FUBP1	100	99.088	ENSCHOG00000008177	FUBP1	100	99.088	Choloepus_hoffmanni
ENSCPOG00000002757	FUBP1	100	98.480	ENSCGRG00001007103	Fubp1	100	98.480	Cricetulus_griseus_chok1gshd
ENSCPOG00000002757	FUBP1	100	98.658	ENSCGRG00000003372	Fubp1	100	99.191	Cricetulus_griseus_crigri
ENSCPOG00000002757	FUBP1	98	70.946	ENSCSEG00000021412	fubp1	70	76.522	Cynoglossus_semilaevis
ENSCPOG00000002757	FUBP1	98	70.946	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSCPOG00000002757	FUBP1	100	71.812	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSCPOG00000002757	FUBP1	67	69.136	ENSDNOG00000034565	-	82	69.880	Dasypus_novemcinctus
ENSCPOG00000002757	FUBP1	100	98.632	ENSDORG00000016534	Fubp1	100	98.632	Dipodomys_ordii
ENSCPOG00000002757	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSCPOG00000002757	FUBP1	84	45.051	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSCPOG00000002757	FUBP1	100	97.987	ENSEEUG00000001287	FUBP1	100	85.258	Erinaceus_europaeus
ENSCPOG00000002757	FUBP1	98	76.871	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSCPOG00000002757	FUBP1	98	96.599	ENSFALG00000005768	FUBP1	98	95.679	Ficedula_albicollis
ENSCPOG00000002757	FUBP1	100	99.240	ENSFDAG00000014210	FUBP1	100	99.315	Fukomys_damarensis
ENSCPOG00000002757	FUBP1	98	71.472	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSCPOG00000002757	FUBP1	98	66.156	ENSGMOG00000003370	fubp1	70	69.518	Gadus_morhua
ENSCPOG00000002757	FUBP1	98	96.599	ENSGALG00000008939	FUBP1	99	96.296	Gallus_gallus
ENSCPOG00000002757	FUBP1	98	70.946	ENSGAFG00000020972	fubp1	91	77.098	Gambusia_affinis
ENSCPOG00000002757	FUBP1	98	70.122	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSCPOG00000002757	FUBP1	98	70.946	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSCPOG00000002757	FUBP1	70	91.613	ENSHGLG00000002808	-	72	91.447	Heterocephalus_glaber_female
ENSCPOG00000002757	FUBP1	100	99.696	ENSHGLG00000008415	-	100	99.696	Heterocephalus_glaber_female
ENSCPOG00000002757	FUBP1	100	99.696	ENSHGLG00100003417	-	100	99.696	Heterocephalus_glaber_male
ENSCPOG00000002757	FUBP1	70	92.473	ENSHGLG00100001414	-	72	92.105	Heterocephalus_glaber_male
ENSCPOG00000002757	FUBP1	98	70.270	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSCPOG00000002757	FUBP1	98	79.592	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSCPOG00000002757	FUBP1	100	99.240	ENSSTOG00000014312	FUBP1	100	99.240	Ictidomys_tridecemlineatus
ENSCPOG00000002757	FUBP1	100	97.987	ENSJJAG00000020069	Fubp1	100	99.315	Jaculus_jaculus
ENSCPOG00000002757	FUBP1	98	70.946	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSCPOG00000002757	FUBP1	98	70.270	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSCPOG00000002757	FUBP1	94	82.270	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSCPOG00000002757	FUBP1	100	97.987	ENSLAFG00000003273	FUBP1	99	97.834	Loxodonta_africana
ENSCPOG00000002757	FUBP1	100	98.480	ENSMFAG00000031825	FUBP1	100	98.480	Macaca_fascicularis
ENSCPOG00000002757	FUBP1	100	98.480	ENSMMUG00000002899	FUBP1	100	98.480	Macaca_mulatta
ENSCPOG00000002757	FUBP1	100	98.480	ENSMNEG00000045212	FUBP1	100	98.480	Macaca_nemestrina
ENSCPOG00000002757	FUBP1	98	71.363	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSCPOG00000002757	FUBP1	98	96.599	ENSMGAG00000009424	FUBP1	99	96.546	Meleagris_gallopavo
ENSCPOG00000002757	FUBP1	100	99.329	ENSMAUG00000016428	Fubp1	100	99.329	Mesocricetus_auratus
ENSCPOG00000002757	FUBP1	100	99.329	ENSMOCG00000014751	Fubp1	100	99.329	Microtus_ochrogaster
ENSCPOG00000002757	FUBP1	98	69.595	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCPOG00000002757	FUBP1	98	86.747	ENSMODG00000020804	FUBP1	100	90.297	Monodelphis_domestica
ENSCPOG00000002757	FUBP1	98	70.946	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSCPOG00000002757	FUBP1	100	98.658	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.658	Mus_caroli
ENSCPOG00000002757	FUBP1	100	97.987	ENSMUSG00000028034	Fubp1	100	97.987	Mus_musculus
ENSCPOG00000002757	FUBP1	100	98.658	MGP_PahariEiJ_G0027191	Fubp1	100	98.658	Mus_pahari
ENSCPOG00000002757	FUBP1	100	98.658	MGP_SPRETEiJ_G0026693	Fubp1	100	98.658	Mus_spretus
ENSCPOG00000002757	FUBP1	100	97.987	ENSMLUG00000014802	FUBP1	99	95.075	Myotis_lucifugus
ENSCPOG00000002757	FUBP1	100	97.987	ENSNGAG00000014302	Fubp1	100	97.987	Nannospalax_galili
ENSCPOG00000002757	FUBP1	98	70.946	ENSNBRG00000015099	fubp1	72	77.753	Neolamprologus_brichardi
ENSCPOG00000002757	FUBP1	100	97.987	ENSNLEG00000009772	FUBP1	100	94.848	Nomascus_leucogenys
ENSCPOG00000002757	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSCPOG00000002757	FUBP1	91	95.302	ENSOPRG00000001175	FUBP1	91	95.302	Ochotona_princeps
ENSCPOG00000002757	FUBP1	100	99.392	ENSODEG00000002600	-	100	99.392	Octodon_degus
ENSCPOG00000002757	FUBP1	100	67.785	ENSODEG00000003657	-	99	66.202	Octodon_degus
ENSCPOG00000002757	FUBP1	100	69.536	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSCPOG00000002757	FUBP1	98	98.630	ENSOANG00000009777	FUBP1	99	91.776	Ornithorhynchus_anatinus
ENSCPOG00000002757	FUBP1	98	69.350	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSCPOG00000002757	FUBP1	98	69.118	ENSORLG00020005908	fubp1	70	77.313	Oryzias_latipes_hni
ENSCPOG00000002757	FUBP1	98	70.743	ENSORLG00015008779	fubp1	70	77.313	Oryzias_latipes_hsok
ENSCPOG00000002757	FUBP1	98	67.947	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSCPOG00000002757	FUBP1	100	97.987	ENSOGAG00000014233	FUBP1	99	95.082	Otolemur_garnettii
ENSCPOG00000002757	FUBP1	98	99.315	ENSOARG00000013259	FUBP1	99	95.345	Ovis_aries
ENSCPOG00000002757	FUBP1	100	98.784	ENSPPRG00000000413	FUBP1	100	98.784	Panthera_pardus
ENSCPOG00000002757	FUBP1	100	98.784	ENSPTIG00000019450	FUBP1	100	98.784	Panthera_tigris_altaica
ENSCPOG00000002757	FUBP1	98	96.599	ENSPSIG00000012965	FUBP1	99	96.134	Pelodiscus_sinensis
ENSCPOG00000002757	FUBP1	100	98.176	ENSPEMG00000021802	Fubp1	100	98.630	Peromyscus_maniculatus_bairdii
ENSCPOG00000002757	FUBP1	56	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSCPOG00000002757	FUBP1	98	70.946	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSCPOG00000002757	FUBP1	98	72.531	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSCPOG00000002757	FUBP1	98	71.277	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSCPOG00000002757	FUBP1	75	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSCPOG00000002757	FUBP1	100	98.480	ENSPCAG00000012617	FUBP1	100	98.480	Procavia_capensis
ENSCPOG00000002757	FUBP1	100	98.784	ENSPCOG00000024974	FUBP1	100	98.784	Propithecus_coquereli
ENSCPOG00000002757	FUBP1	100	94.377	ENSPVAG00000014637	FUBP1	100	94.377	Pteropus_vampyrus
ENSCPOG00000002757	FUBP1	98	71.189	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSCPOG00000002757	FUBP1	98	80.272	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSCPOG00000002757	FUBP1	100	97.987	ENSRNOG00000043370	Fubp1	99	98.452	Rattus_norvegicus
ENSCPOG00000002757	FUBP1	100	97.987	ENSRBIG00000042950	FUBP1	99	98.607	Rhinopithecus_bieti
ENSCPOG00000002757	FUBP1	100	97.987	ENSRROG00000043534	FUBP1	99	98.607	Rhinopithecus_roxellana
ENSCPOG00000002757	FUBP1	100	98.480	ENSSBOG00000027299	FUBP1	100	98.480	Saimiri_boliviensis_boliviensis
ENSCPOG00000002757	FUBP1	98	98.630	ENSSHAG00000005367	FUBP1	100	96.945	Sarcophilus_harrisii
ENSCPOG00000002757	FUBP1	98	78.231	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSCPOG00000002757	FUBP1	100	69.281	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSCPOG00000002757	FUBP1	100	69.281	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSCPOG00000002757	FUBP1	100	97.133	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSCPOG00000002757	FUBP1	98	88.306	ENSSPUG00000008389	FUBP1	99	86.152	Sphenodon_punctatus
ENSCPOG00000002757	FUBP1	98	71.957	ENSSPAG00000010161	fubp1	69	77.533	Stegastes_partitus
ENSCPOG00000002757	FUBP1	98	92.810	ENSTGUG00000006841	FUBP1	100	95.915	Taeniopygia_guttata
ENSCPOG00000002757	FUBP1	98	70.548	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSCPOG00000002757	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCPOG00000002757	FUBP1	100	98.632	ENSTTRG00000000096	FUBP1	100	98.632	Tursiops_truncatus
ENSCPOG00000002757	FUBP1	99	98.622	ENSVPAG00000004709	FUBP1	100	98.622	Vicugna_pacos
ENSCPOG00000002757	FUBP1	98	68.300	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSCPOG00000002757	FUBP1	98	70.946	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus