EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000002901 (Gene tree)
Gene ID: 100714542
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 26840 bases
Position: chrDS562855.1:17823871-17850710
Accession: 100714542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002636	POP1	PF06978.11	1.1e-36	1	2
ENSCPOP00000002636	POP1	PF06978.11	1.1e-36	2	2
ENSCPOP00000002636	POPLD	PF08170.12	5.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002937	POP1-201	3184	XM_003479885	ENSCPOP00000002636	1012 (aa)	XP_003479933	H0UZL9

Gene Model

Click here to download ENSCPOG00000002901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002901	POP1	100	81.152	ENSG00000104356	POP1	100	88.525	Homo_sapiens
ENSCPOG00000002901	POP1	100	47.488	ENSAPOG00000008198	pop1	100	47.488	Acanthochromis_polyacanthus
ENSCPOG00000002901	POP1	99	77.498	ENSAMEG00000000556	POP1	99	77.498	Ailuropoda_melanoleuca
ENSCPOG00000002901	POP1	90	49.309	ENSACIG00000004169	POP1	100	46.648	Amphilophus_citrinellus
ENSCPOG00000002901	POP1	100	47.378	ENSAOCG00000010991	pop1	100	47.378	Amphiprion_ocellaris
ENSCPOG00000002901	POP1	93	46.177	ENSAPEG00000007607	pop1	98	46.680	Amphiprion_percula
ENSCPOG00000002901	POP1	100	46.328	ENSATEG00000024814	POP1	100	46.284	Anabas_testudineus
ENSCPOG00000002901	POP1	92	61.752	ENSAPLG00000014418	POP1	99	61.859	Anas_platyrhynchos
ENSCPOG00000002901	POP1	99	55.882	ENSACAG00000016083	POP1	100	56.183	Anolis_carolinensis
ENSCPOG00000002901	POP1	88	86.053	ENSANAG00000026360	POP1	99	86.053	Aotus_nancymaae
ENSCPOG00000002901	POP1	100	47.597	ENSACLG00000010951	pop1	100	47.970	Astatotilapia_calliptera
ENSCPOG00000002901	POP1	99	46.147	ENSAMXG00000014483	POP1	99	45.961	Astyanax_mexicanus
ENSCPOG00000002901	POP1	100	76.465	ENSBTAG00000012596	POP1	100	76.465	Bos_taurus
ENSCPOG00000002901	POP1	100	79.297	ENSCJAG00000015567	POP1	100	79.297	Callithrix_jacchus
ENSCPOG00000002901	POP1	100	77.384	ENSCAFG00000000469	POP1	100	77.188	Canis_familiaris
ENSCPOG00000002901	POP1	100	77.485	ENSCAFG00020026765	POP1	100	77.485	Canis_lupus_dingo
ENSCPOG00000002901	POP1	100	76.390	ENSCHIG00000017066	POP1	100	76.585	Capra_hircus
ENSCPOG00000002901	POP1	100	80.469	ENSTSYG00000003097	POP1	100	80.469	Carlito_syrichta
ENSCPOG00000002901	POP1	100	95.870	ENSCAPG00000007251	POP1	100	95.870	Cavia_aperea
ENSCPOG00000002901	POP1	100	79.004	ENSCCAG00000018939	POP1	100	79.199	Cebus_capucinus
ENSCPOG00000002901	POP1	100	80.273	ENSCATG00000040916	POP1	100	80.273	Cercocebus_atys
ENSCPOG00000002901	POP1	100	88.791	ENSCLAG00000007208	POP1	97	88.791	Chinchilla_lanigera
ENSCPOG00000002901	POP1	90	80.369	ENSCSAG00000012340	POP1	99	80.369	Chlorocebus_sabaeus
ENSCPOG00000002901	POP1	95	74.488	ENSCHOG00000011432	POP1	100	74.693	Choloepus_hoffmanni
ENSCPOG00000002901	POP1	100	63.957	ENSCPBG00000006373	POP1	100	64.418	Chrysemys_picta_bellii
ENSCPOG00000002901	POP1	82	37.743	ENSCING00000008323	-	90	37.011	Ciona_intestinalis
ENSCPOG00000002901	POP1	100	80.371	ENSCANG00000001647	POP1	100	80.371	Colobus_angolensis_palliatus
ENSCPOG00000002901	POP1	100	75.930	ENSCGRG00001017308	Pop1	100	75.832	Cricetulus_griseus_chok1gshd
ENSCPOG00000002901	POP1	100	70.450	ENSCGRG00000010824	Pop1	100	70.352	Cricetulus_griseus_crigri
ENSCPOG00000002901	POP1	100	45.429	ENSCSEG00000008737	POP1	100	45.558	Cynoglossus_semilaevis
ENSCPOG00000002901	POP1	100	47.076	ENSCVAG00000022248	pop1	100	47.076	Cyprinodon_variegatus
ENSCPOG00000002901	POP1	100	73.610	ENSDNOG00000019974	POP1	100	73.610	Dasypus_novemcinctus
ENSCPOG00000002901	POP1	100	71.457	ENSDORG00000015384	Pop1	100	71.275	Dipodomys_ordii
ENSCPOG00000002901	POP1	62	33.906	FBgn0026702	l(1)G0045	70	33.801	Drosophila_melanogaster
ENSCPOG00000002901	POP1	89	68.421	ENSETEG00000007839	POP1	88	68.421	Echinops_telfairi
ENSCPOG00000002901	POP1	100	78.613	ENSEASG00005003189	POP1	98	78.613	Equus_asinus_asinus
ENSCPOG00000002901	POP1	100	78.613	ENSECAG00000024236	POP1	100	78.613	Equus_caballus
ENSCPOG00000002901	POP1	67	66.300	ENSEEUG00000003050	-	70	66.300	Erinaceus_europaeus
ENSCPOG00000002901	POP1	99	46.860	ENSELUG00000003526	pop1	99	46.957	Esox_lucius
ENSCPOG00000002901	POP1	100	79.297	ENSFCAG00000002168	POP1	100	79.297	Felis_catus
ENSCPOG00000002901	POP1	100	58.341	ENSFALG00000005711	POP1	100	58.285	Ficedula_albicollis
ENSCPOG00000002901	POP1	100	85.337	ENSFDAG00000017068	POP1	100	85.337	Fukomys_damarensis
ENSCPOG00000002901	POP1	100	46.337	ENSFHEG00000019518	pop1	100	46.183	Fundulus_heteroclitus
ENSCPOG00000002901	POP1	95	45.174	ENSGMOG00000000659	POP1	99	45.120	Gadus_morhua
ENSCPOG00000002901	POP1	100	47.122	ENSGAFG00000019770	POP1	100	47.122	Gambusia_affinis
ENSCPOG00000002901	POP1	100	46.851	ENSGACG00000003499	pop1	100	46.851	Gasterosteus_aculeatus
ENSCPOG00000002901	POP1	100	63.275	ENSGAGG00000011737	POP1	98	63.681	Gopherus_agassizii
ENSCPOG00000002901	POP1	100	80.859	ENSGGOG00000003176	POP1	100	80.859	Gorilla_gorilla
ENSCPOG00000002901	POP1	100	48.152	ENSHBUG00000021583	pop1	100	48.250	Haplochromis_burtoni
ENSCPOG00000002901	POP1	100	85.239	ENSHGLG00000006029	POP1	100	85.239	Heterocephalus_glaber_female
ENSCPOG00000002901	POP1	100	85.239	ENSHGLG00100016879	POP1	100	85.239	Heterocephalus_glaber_male
ENSCPOG00000002901	POP1	90	48.759	ENSHCOG00000013888	pop1	96	48.077	Hippocampus_comes
ENSCPOG00000002901	POP1	99	45.914	ENSIPUG00000018336	pop1	99	45.914	Ictalurus_punctatus
ENSCPOG00000002901	POP1	100	80.569	ENSSTOG00000011455	POP1	97	80.569	Ictidomys_tridecemlineatus
ENSCPOG00000002901	POP1	100	74.533	ENSJJAG00000013325	Pop1	100	73.555	Jaculus_jaculus
ENSCPOG00000002901	POP1	100	47.303	ENSKMAG00000001346	POP1	100	47.303	Kryptolebias_marmoratus
ENSCPOG00000002901	POP1	89	48.426	ENSLBEG00000024457	POP1	95	48.243	Labrus_bergylta
ENSCPOG00000002901	POP1	93	55.668	ENSLACG00000012498	POP1	99	55.668	Latimeria_chalumnae
ENSCPOG00000002901	POP1	100	50.729	ENSLOCG00000009817	POP1	100	50.823	Lepisosteus_oculatus
ENSCPOG00000002901	POP1	100	78.082	ENSLAFG00000010770	POP1	100	78.082	Loxodonta_africana
ENSCPOG00000002901	POP1	100	80.371	ENSMFAG00000000347	POP1	100	80.371	Macaca_fascicularis
ENSCPOG00000002901	POP1	100	80.078	ENSMNEG00000036870	POP1	100	80.078	Macaca_nemestrina
ENSCPOG00000002901	POP1	100	80.176	ENSMLEG00000034986	POP1	100	80.176	Mandrillus_leucophaeus
ENSCPOG00000002901	POP1	100	46.198	ENSMAMG00000004040	pop1	100	46.578	Mastacembelus_armatus
ENSCPOG00000002901	POP1	100	48.061	ENSMZEG00005025448	pop1	100	48.159	Maylandia_zebra
ENSCPOG00000002901	POP1	100	56.310	ENSMGAG00000012167	POP1	100	56.209	Meleagris_gallopavo
ENSCPOG00000002901	POP1	100	75.859	ENSMAUG00000017537	Pop1	100	75.859	Mesocricetus_auratus
ENSCPOG00000002901	POP1	100	80.743	ENSMICG00000004361	POP1	100	80.743	Microcebus_murinus
ENSCPOG00000002901	POP1	100	74.975	ENSMOCG00000006356	Pop1	100	75.074	Microtus_ochrogaster
ENSCPOG00000002901	POP1	100	44.000	ENSMMOG00000018242	pop1	100	43.902	Mola_mola
ENSCPOG00000002901	POP1	100	66.537	ENSMODG00000006561	POP1	100	66.148	Monodelphis_domestica
ENSCPOG00000002901	POP1	100	47.308	ENSMALG00000012621	POP1	100	47.313	Monopterus_albus
ENSCPOG00000002901	POP1	100	73.973	MGP_CAROLIEiJ_G0019726	Pop1	100	74.339	Mus_caroli
ENSCPOG00000002901	POP1	100	74.266	ENSMUSG00000022325	Pop1	100	74.633	Mus_musculus
ENSCPOG00000002901	POP1	100	75.122	MGP_PahariEiJ_G0019735	Pop1	100	74.829	Mus_pahari
ENSCPOG00000002901	POP1	100	74.168	MGP_SPRETEiJ_G0020622	Pop1	100	74.535	Mus_spretus
ENSCPOG00000002901	POP1	100	78.210	ENSMPUG00000015250	POP1	100	78.210	Mustela_putorius_furo
ENSCPOG00000002901	POP1	100	74.659	ENSMLUG00000010204	POP1	100	74.659	Myotis_lucifugus
ENSCPOG00000002901	POP1	100	78.767	ENSNGAG00000001582	Pop1	100	78.767	Nannospalax_galili
ENSCPOG00000002901	POP1	89	48.384	ENSNBRG00000002356	pop1	94	48.456	Neolamprologus_brichardi
ENSCPOG00000002901	POP1	100	80.371	ENSNLEG00000002541	POP1	100	80.371	Nomascus_leucogenys
ENSCPOG00000002901	POP1	92	59.660	ENSMEUG00000003118	POP1	97	59.660	Notamacropus_eugenii
ENSCPOG00000002901	POP1	100	76.552	ENSOPRG00000007667	POP1	100	76.552	Ochotona_princeps
ENSCPOG00000002901	POP1	100	84.495	ENSODEG00000003984	POP1	100	84.495	Octodon_degus
ENSCPOG00000002901	POP1	100	48.808	ENSONIG00000016445	pop1	100	48.628	Oreochromis_niloticus
ENSCPOG00000002901	POP1	60	70.122	ENSOANG00000001278	-	94	70.122	Ornithorhynchus_anatinus
ENSCPOG00000002901	POP1	100	77.745	ENSOCUG00000017400	POP1	100	77.745	Oryctolagus_cuniculus
ENSCPOG00000002901	POP1	100	47.771	ENSORLG00000002839	pop1	100	48.213	Oryzias_latipes
ENSCPOG00000002901	POP1	91	48.411	ENSORLG00020022450	POP1	98	48.629	Oryzias_latipes_hni
ENSCPOG00000002901	POP1	92	49.684	ENSORLG00015012746	POP1	100	47.868	Oryzias_latipes_hsok
ENSCPOG00000002901	POP1	100	47.456	ENSOMEG00000006915	pop1	99	47.554	Oryzias_melastigma
ENSCPOG00000002901	POP1	100	78.299	ENSOGAG00000001466	POP1	100	78.299	Otolemur_garnettii
ENSCPOG00000002901	POP1	100	81.152	ENSPPAG00000018410	POP1	100	81.152	Pan_paniscus
ENSCPOG00000002901	POP1	100	79.122	ENSPPRG00000005002	POP1	100	79.122	Panthera_pardus
ENSCPOG00000002901	POP1	100	79.317	ENSPTIG00000016527	POP1	100	79.317	Panthera_tigris_altaica
ENSCPOG00000002901	POP1	100	81.152	ENSPTRG00000020458	POP1	100	81.152	Pan_troglodytes
ENSCPOG00000002901	POP1	100	80.078	ENSPANG00000009704	POP1	100	80.078	Papio_anubis
ENSCPOG00000002901	POP1	99	50.097	ENSPKIG00000016325	POP1	99	50.097	Paramormyrops_kingsleyae
ENSCPOG00000002901	POP1	100	62.305	ENSPSIG00000012343	POP1	100	62.281	Pelodiscus_sinensis
ENSCPOG00000002901	POP1	90	47.910	ENSPMGG00000022253	POP1	95	48.397	Periophthalmus_magnuspinnatus
ENSCPOG00000002901	POP1	99	73.538	ENSPEMG00000023633	Pop1	100	73.538	Peromyscus_maniculatus_bairdii
ENSCPOG00000002901	POP1	90	44.339	ENSPMAG00000003209	POP1	100	44.762	Petromyzon_marinus
ENSCPOG00000002901	POP1	100	66.343	ENSPCIG00000012216	POP1	100	66.602	Phascolarctos_cinereus
ENSCPOG00000002901	POP1	100	47.144	ENSPFOG00000012490	POP1	100	47.144	Poecilia_formosa
ENSCPOG00000002901	POP1	100	46.996	ENSPLAG00000004646	POP1	100	46.996	Poecilia_latipinna
ENSCPOG00000002901	POP1	100	47.343	ENSPMEG00000019592	POP1	100	47.343	Poecilia_mexicana
ENSCPOG00000002901	POP1	100	47.047	ENSPREG00000020951	POP1	100	47.047	Poecilia_reticulata
ENSCPOG00000002901	POP1	100	81.250	ENSPPYG00000018777	POP1	100	81.250	Pongo_abelii
ENSCPOG00000002901	POP1	100	71.933	ENSPCAG00000016662	POP1	100	71.933	Procavia_capensis
ENSCPOG00000002901	POP1	100	81.525	ENSPCOG00000019420	POP1	100	81.525	Propithecus_coquereli
ENSCPOG00000002901	POP1	100	77.680	ENSPVAG00000014468	POP1	100	77.680	Pteropus_vampyrus
ENSCPOG00000002901	POP1	89	49.028	ENSPNYG00000004476	pop1	100	46.583	Pundamilia_nyererei
ENSCPOG00000002901	POP1	99	45.556	ENSPNAG00000000265	pop1	99	45.556	Pygocentrus_nattereri
ENSCPOG00000002901	POP1	100	75.514	ENSRNOG00000005243	Pop1	100	75.514	Rattus_norvegicus
ENSCPOG00000002901	POP1	100	80.176	ENSRBIG00000007996	POP1	100	80.176	Rhinopithecus_bieti
ENSCPOG00000002901	POP1	100	80.371	ENSRROG00000012334	POP1	100	80.371	Rhinopithecus_roxellana
ENSCPOG00000002901	POP1	99	80.317	ENSSBOG00000020830	POP1	100	80.317	Saimiri_boliviensis_boliviensis
ENSCPOG00000002901	POP1	100	66.893	ENSSHAG00000000296	POP1	100	66.602	Sarcophilus_harrisii
ENSCPOG00000002901	POP1	100	48.266	ENSSFOG00015007429	pop1	99	48.062	Scleropages_formosus
ENSCPOG00000002901	POP1	86	52.672	ENSSMAG00000010467	POP1	98	47.772	Scophthalmus_maximus
ENSCPOG00000002901	POP1	100	45.798	ENSSDUG00000007817	POP1	100	46.270	Seriola_dumerili
ENSCPOG00000002901	POP1	100	46.081	ENSSLDG00000012565	POP1	100	46.321	Seriola_lalandi_dorsalis
ENSCPOG00000002901	POP1	100	58.439	ENSSPUG00000003550	-	100	58.847	Sphenodon_punctatus
ENSCPOG00000002901	POP1	100	47.255	ENSSPAG00000014955	pop1	100	47.209	Stegastes_partitus
ENSCPOG00000002901	POP1	100	76.735	ENSSSCG00000006078	POP1	100	76.735	Sus_scrofa
ENSCPOG00000002901	POP1	92	55.450	ENSTGUG00000012011	-	100	56.098	Taeniopygia_guttata
ENSCPOG00000002901	POP1	89	48.587	ENSTRUG00000010856	pop1	92	48.587	Takifugu_rubripes
ENSCPOG00000002901	POP1	92	48.340	ENSTNIG00000013297	pop1	99	48.801	Tetraodon_nigroviridis
ENSCPOG00000002901	POP1	95	76.404	ENSTBEG00000014214	POP1	100	76.404	Tupaia_belangeri
ENSCPOG00000002901	POP1	100	75.684	ENSTTRG00000016071	POP1	100	75.684	Tursiops_truncatus
ENSCPOG00000002901	POP1	99	75.345	ENSUAMG00000017309	POP1	99	75.345	Ursus_americanus
ENSCPOG00000002901	POP1	91	88.664	ENSUMAG00000016952	POP1	99	88.664	Ursus_maritimus
ENSCPOG00000002901	POP1	82	87.546	ENSVPAG00000008278	POP1	82	87.546	Vicugna_pacos
ENSCPOG00000002901	POP1	100	77.583	ENSVVUG00000010994	POP1	100	77.583	Vulpes_vulpes
ENSCPOG00000002901	POP1	100	42.610	ENSXCOG00000017043	POP1	100	42.761	Xiphophorus_couchianus
ENSCPOG00000002901	POP1	100	46.139	ENSXMAG00000002472	POP1	100	45.946	Xiphophorus_maculatus