EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000002922 (Gene tree)
Gene ID: -
Gene Symbol: PATL2
Alias: Pat1a
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 9032 bases
Position: chrDS562865.1:29965800-29974831
Accession: 100720084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002654	PAT1	PF09770.9	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000002958	PATL2-201	1551	XM_013158493	ENSCPOP00000002654	517 (aa)	-	H0UZN7

Gene Model

Click here to download ENSCPOG00000002922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002922	PATL2	91	78.178	ENSG00000229474	PATL2	93	83.891	Homo_sapiens
ENSCPOG00000002922	PATL2	71	44.385	ENSAPOG00000022988	patl2	51	46.377	Acanthochromis_polyacanthus
ENSCPOG00000002922	PATL2	91	75.212	ENSAMEG00000014997	PATL2	96	71.984	Ailuropoda_melanoleuca
ENSCPOG00000002922	PATL2	78	41.727	ENSAPEG00000011299	patl2	54	46.407	Amphiprion_percula
ENSCPOG00000002922	PATL2	80	41.364	ENSATEG00000019567	patl2	53	45.294	Anabas_testudineus
ENSCPOG00000002922	PATL2	90	46.047	ENSAPLG00000003980	PATL2	82	47.140	Anas_platyrhynchos
ENSCPOG00000002922	PATL2	53	37.543	ENSAPLG00000013394	PATL1	52	39.453	Anas_platyrhynchos
ENSCPOG00000002922	PATL2	65	49.267	ENSACAG00000006951	-	98	48.619	Anolis_carolinensis
ENSCPOG00000002922	PATL2	100	72.523	ENSANAG00000022701	PATL2	95	73.084	Aotus_nancymaae
ENSCPOG00000002922	PATL2	72	44.800	ENSAMXG00000020293	patl2	50	45.402	Astyanax_mexicanus
ENSCPOG00000002922	PATL2	63	78.723	ENSBTAG00000001558	PATL2	92	78.723	Bos_taurus
ENSCPOG00000002922	PATL2	100	72.761	ENSCJAG00000002379	PATL2	95	73.184	Callithrix_jacchus
ENSCPOG00000002922	PATL2	98	71.619	ENSCAFG00000013629	PATL2	95	71.429	Canis_familiaris
ENSCPOG00000002922	PATL2	98	71.977	ENSCAFG00020022169	PATL2	94	71.785	Canis_lupus_dingo
ENSCPOG00000002922	PATL2	99	69.844	ENSCHIG00000026665	PATL2	94	69.844	Capra_hircus
ENSCPOG00000002922	PATL2	100	68.165	ENSTSYG00000032456	PATL2	95	69.476	Carlito_syrichta
ENSCPOG00000002922	PATL2	100	70.056	ENSCCAG00000025261	PATL2	96	71.617	Cebus_capucinus
ENSCPOG00000002922	PATL2	100	71.776	ENSCATG00000034794	PATL2	93	84.498	Cercocebus_atys
ENSCPOG00000002922	PATL2	99	84.423	ENSCLAG00000014407	PATL2	99	84.231	Chinchilla_lanigera
ENSCPOG00000002922	PATL2	72	36.224	ENSCSAG00000006095	PATL1	50	35.613	Chlorocebus_sabaeus
ENSCPOG00000002922	PATL2	90	76.445	ENSCSAG00000009601	PATL2	95	73.435	Chlorocebus_sabaeus
ENSCPOG00000002922	PATL2	72	35.969	ENSCHOG00000001611	PATL1	55	36.286	Choloepus_hoffmanni
ENSCPOG00000002922	PATL2	91	47.852	ENSCPBG00000006150	PATL2	78	47.409	Chrysemys_picta_bellii
ENSCPOG00000002922	PATL2	100	71.857	ENSCANG00000013856	PATL2	95	72.472	Colobus_angolensis_palliatus
ENSCPOG00000002922	PATL2	100	63.774	ENSCGRG00001010801	Patl2	99	64.528	Cricetulus_griseus_chok1gshd
ENSCPOG00000002922	PATL2	100	63.774	ENSCGRG00000013007	Patl2	99	64.528	Cricetulus_griseus_crigri
ENSCPOG00000002922	PATL2	77	43.564	ENSCSEG00000009438	patl2	50	45.797	Cynoglossus_semilaevis
ENSCPOG00000002922	PATL2	81	36.195	ENSCVAG00000016203	patl2	53	39.067	Cyprinodon_variegatus
ENSCPOG00000002922	PATL2	85	34.120	ENSDNOG00000038865	PATL1	63	36.286	Dasypus_novemcinctus
ENSCPOG00000002922	PATL2	100	69.245	ENSDNOG00000036837	PATL2	91	70.350	Dasypus_novemcinctus
ENSCPOG00000002922	PATL2	100	67.232	ENSDORG00000026649	Patl2	99	66.290	Dipodomys_ordii
ENSCPOG00000002922	PATL2	63	77.508	ENSETEG00000005068	PATL2	93	77.508	Echinops_telfairi
ENSCPOG00000002922	PATL2	91	74.043	ENSEASG00005017984	PATL2	95	69.549	Equus_asinus_asinus
ENSCPOG00000002922	PATL2	99	71.617	ENSECAG00000013462	PATL2	95	71.992	Equus_caballus
ENSCPOG00000002922	PATL2	100	71.917	ENSFCAG00000027170	PATL2	95	71.727	Felis_catus
ENSCPOG00000002922	PATL2	81	52.791	ENSFALG00000009768	PATL2	59	53.828	Ficedula_albicollis
ENSCPOG00000002922	PATL2	100	75.954	ENSFDAG00000012242	PATL2	99	76.718	Fukomys_damarensis
ENSCPOG00000002922	PATL2	72	37.245	ENSFDAG00000016128	PATL1	60	35.205	Fukomys_damarensis
ENSCPOG00000002922	PATL2	56	40.136	ENSFHEG00000009727	patl2	57	40.878	Fundulus_heteroclitus
ENSCPOG00000002922	PATL2	73	42.188	ENSGMOG00000005666	patl2	85	44.509	Gadus_morhua
ENSCPOG00000002922	PATL2	81	51.294	ENSGALG00000002167	PATL2	53	52.113	Gallus_gallus
ENSCPOG00000002922	PATL2	72	36.935	ENSGAGG00000004461	PATL1	50	37.429	Gopherus_agassizii
ENSCPOG00000002922	PATL2	100	73.832	ENSGGOG00000025923	PATL2	95	73.645	Gorilla_gorilla
ENSCPOG00000002922	PATL2	78	42.417	ENSHBUG00000005929	patl2	54	45.882	Haplochromis_burtoni
ENSCPOG00000002922	PATL2	100	76.515	ENSHGLG00000017415	-	99	77.083	Heterocephalus_glaber_female
ENSCPOG00000002922	PATL2	100	75.422	ENSHGLG00100008419	-	99	76.360	Heterocephalus_glaber_male
ENSCPOG00000002922	PATL2	80	42.824	ENSIPUG00000020692	patl2	59	42.588	Ictalurus_punctatus
ENSCPOG00000002922	PATL2	100	71.322	ENSSTOG00000033848	PATL2	95	71.322	Ictidomys_tridecemlineatus
ENSCPOG00000002922	PATL2	88	41.379	ENSLACG00000005291	-	53	43.488	Latimeria_chalumnae
ENSCPOG00000002922	PATL2	99	70.152	ENSLAFG00000031124	PATL2	98	70.152	Loxodonta_africana
ENSCPOG00000002922	PATL2	100	71.910	ENSMFAG00000003565	PATL2	95	74.187	Macaca_fascicularis
ENSCPOG00000002922	PATL2	63	84.195	ENSMMUG00000014294	PATL2	93	84.195	Macaca_mulatta
ENSCPOG00000002922	PATL2	100	71.589	ENSMNEG00000034510	PATL2	95	74.046	Macaca_nemestrina
ENSCPOG00000002922	PATL2	100	72.575	ENSMLEG00000042248	PATL2	95	73.507	Mandrillus_leucophaeus
ENSCPOG00000002922	PATL2	74	42.487	ENSMAMG00000013327	patl2	53	44.345	Mastacembelus_armatus
ENSCPOG00000002922	PATL2	89	45.691	ENSMGAG00000001309	PATL2	81	46.800	Meleagris_gallopavo
ENSCPOG00000002922	PATL2	100	63.019	ENSMAUG00000001008	Patl2	96	63.774	Mesocricetus_auratus
ENSCPOG00000002922	PATL2	63	82.979	ENSMICG00000005037	PATL2	93	82.979	Microcebus_murinus
ENSCPOG00000002922	PATL2	100	65.291	ENSMOCG00000015367	Patl2	98	65.094	Microtus_ochrogaster
ENSCPOG00000002922	PATL2	71	39.305	ENSMMOG00000001299	patl2	51	40.588	Mola_mola
ENSCPOG00000002922	PATL2	90	66.526	ENSMODG00000017690	PATL2	89	61.850	Monodelphis_domestica
ENSCPOG00000002922	PATL2	100	66.290	MGP_CAROLIEiJ_G0024205	Patl2	98	66.290	Mus_caroli
ENSCPOG00000002922	PATL2	100	65.913	ENSMUSG00000027233	Patl2	98	65.913	Mus_musculus
ENSCPOG00000002922	PATL2	100	65.913	MGP_PahariEiJ_G0025648	Patl2	98	65.913	Mus_pahari
ENSCPOG00000002922	PATL2	100	66.290	MGP_SPRETEiJ_G0025122	Patl2	98	66.290	Mus_spretus
ENSCPOG00000002922	PATL2	99	63.419	ENSNGAG00000020368	Patl2	99	63.971	Nannospalax_galili
ENSCPOG00000002922	PATL2	78	42.317	ENSNBRG00000011745	patl2	51	46.176	Neolamprologus_brichardi
ENSCPOG00000002922	PATL2	100	73.684	ENSNLEG00000005673	PATL2	95	74.615	Nomascus_leucogenys
ENSCPOG00000002922	PATL2	65	36.571	ENSOPRG00000007963	PATL1	53	36.467	Ochotona_princeps
ENSCPOG00000002922	PATL2	65	37.322	ENSOANG00000011117	-	85	37.607	Ornithorhynchus_anatinus
ENSCPOG00000002922	PATL2	87	58.553	ENSOANG00000001538	-	100	58.206	Ornithorhynchus_anatinus
ENSCPOG00000002922	PATL2	99	69.275	ENSOCUG00000006339	PATL2	98	69.275	Oryctolagus_cuniculus
ENSCPOG00000002922	PATL2	97	69.632	ENSOGAG00000004709	PATL2	95	70.152	Otolemur_garnettii
ENSCPOG00000002922	PATL2	99	67.992	ENSOARG00000003762	PATL2	98	67.614	Ovis_aries
ENSCPOG00000002922	PATL2	100	73.420	ENSPPAG00000007221	PATL2	95	73.234	Pan_paniscus
ENSCPOG00000002922	PATL2	100	71.591	ENSPPRG00000004279	PATL2	95	71.402	Panthera_pardus
ENSCPOG00000002922	PATL2	100	72.106	ENSPTIG00000018964	PATL2	95	71.917	Panthera_tigris_altaica
ENSCPOG00000002922	PATL2	100	73.606	ENSPTRG00000041536	PATL2	95	73.420	Pan_troglodytes
ENSCPOG00000002922	PATL2	100	71.536	ENSPANG00000018026	PATL2	95	73.996	Papio_anubis
ENSCPOG00000002922	PATL2	78	43.256	ENSPKIG00000016887	patl2	57	43.880	Paramormyrops_kingsleyae
ENSCPOG00000002922	PATL2	91	46.598	ENSPSIG00000017690	PATL2	97	49.000	Pelodiscus_sinensis
ENSCPOG00000002922	PATL2	74	40.306	ENSPMGG00000014550	patl2	55	42.815	Periophthalmus_magnuspinnatus
ENSCPOG00000002922	PATL2	100	66.793	ENSPEMG00000016509	Patl2	98	66.793	Peromyscus_maniculatus_bairdii
ENSCPOG00000002922	PATL2	97	58.743	ENSPCIG00000018256	PATL2	96	58.641	Phascolarctos_cinereus
ENSCPOG00000002922	PATL2	100	70.363	ENSPCOG00000000295	PATL2	93	82.371	Propithecus_coquereli
ENSCPOG00000002922	PATL2	72	31.701	ENSPVAG00000015239	PATL1	54	30.726	Pteropus_vampyrus
ENSCPOG00000002922	PATL2	78	42.180	ENSPNYG00000017381	patl2	54	45.588	Pundamilia_nyererei
ENSCPOG00000002922	PATL2	78	43.309	ENSPNAG00000002315	patl2	51	46.023	Pygocentrus_nattereri
ENSCPOG00000002922	PATL2	99	65.909	ENSRNOG00000017061	Patl2	98	66.288	Rattus_norvegicus
ENSCPOG00000002922	PATL2	100	70.654	ENSRBIG00000040369	PATL2	95	72.575	Rhinopithecus_bieti
ENSCPOG00000002922	PATL2	100	70.841	ENSRROG00000028786	PATL2	95	72.761	Rhinopithecus_roxellana
ENSCPOG00000002922	PATL2	90	74.840	ENSSBOG00000034766	PATL2	96	71.028	Saimiri_boliviensis_boliviensis
ENSCPOG00000002922	PATL2	76	42.857	ENSSFOG00015000720	patl2	58	43.649	Scleropages_formosus
ENSCPOG00000002922	PATL2	80	41.818	ENSSMAG00000017262	patl2	69	41.204	Scophthalmus_maximus
ENSCPOG00000002922	PATL2	78	41.232	ENSSLDG00000017922	patl2	63	41.860	Seriola_lalandi_dorsalis
ENSCPOG00000002922	PATL2	95	67.339	ENSSARG00000009047	PATL2	98	67.137	Sorex_araneus
ENSCPOG00000002922	PATL2	62	54.938	ENSSPUG00000019065	PATL2	94	55.556	Sphenodon_punctatus
ENSCPOG00000002922	PATL2	78	40.047	ENSSPAG00000004784	patl2	54	44.023	Stegastes_partitus
ENSCPOG00000002922	PATL2	72	35.459	ENSSSCG00000013124	PATL1	52	35.328	Sus_scrofa
ENSCPOG00000002922	PATL2	73	54.331	ENSTGUG00000004619	-	97	56.021	Taeniopygia_guttata
ENSCPOG00000002922	PATL2	65	36.571	ENSTTRG00000009389	PATL1	53	36.571	Tursiops_truncatus
ENSCPOG00000002922	PATL2	100	70.741	ENSUAMG00000018533	PATL2	95	70.556	Ursus_americanus
ENSCPOG00000002922	PATL2	85	34.624	ENSUMAG00000018634	PATL1	51	35.613	Ursus_maritimus
ENSCPOG00000002922	PATL2	100	70.741	ENSUMAG00000007738	PATL2	95	70.556	Ursus_maritimus
ENSCPOG00000002922	PATL2	85	34.267	ENSVVUG00000016668	PATL1	50	35.328	Vulpes_vulpes
ENSCPOG00000002922	PATL2	97	71.923	ENSVVUG00000011576	PATL2	95	71.731	Vulpes_vulpes
ENSCPOG00000002922	PATL2	73	45.144	ENSXETG00000014167	patl2	71	42.956	Xenopus_tropicalis
ENSCPOG00000002922	PATL2	73	36.132	ENSXCOG00000010808	patl1	62	37.429	Xiphophorus_couchianus