EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000002961 (Gene tree)
Gene ID: 100719190
Gene Symbol: YTHDF3
Alias: FLJ31657
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 31482 bases
Position: chrDS562855.1:49378377-49409858
Accession: 100719190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002690	YTH	PF04146.15	2.2e-40	1	1
ENSCPOP00000026318	YTH	PF04146.15	2.3e-40	1	1
ENSCPOP00000023652	YTH	PF04146.15	2.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035893	YTHDF3-203	1722	-	ENSCPOP00000026318	573 (aa)	-	A0A286XLZ7
ENSCPOT00000002998	YTHDF3-202	1722	-	ENSCPOP00000002690	573 (aa)	-	H0UZS1
ENSCPOT00000032783	YTHDF3-201	5983	XM_003479951	ENSCPOP00000023652	585 (aa)	XP_003479999	A0A286XDW5

Gene Model

Click here to download ENSCPOG00000002961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000002961	YTHDF3	99	64.888	ENSCPOG00000019907	YTHDF2	95	63.668
ENSCPOG00000002961	YTHDF3	98	65.597	ENSCPOG00000010202	YTHDF1	97	66.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002961	YTHDF3	100	99.316	ENSG00000185728	YTHDF3	100	100.000	Homo_sapiens
ENSCPOG00000002961	YTHDF3	100	98.462	ENSAMEG00000018113	YTHDF3	100	98.462	Ailuropoda_melanoleuca
ENSCPOG00000002961	YTHDF3	99	60.490	ENSATEG00000011478	ythdf3	93	93.514	Anabas_testudineus
ENSCPOG00000002961	YTHDF3	98	93.870	ENSAPLG00000011329	YTHDF3	97	92.692	Anas_platyrhynchos
ENSCPOG00000002961	YTHDF3	100	92.821	ENSACAG00000016837	YTHDF3	100	92.137	Anolis_carolinensis
ENSCPOG00000002961	YTHDF3	100	99.145	ENSANAG00000037920	YTHDF3	100	99.145	Aotus_nancymaae
ENSCPOG00000002961	YTHDF3	98	81.979	ENSAMXG00000030366	ythdf3	97	77.041	Astyanax_mexicanus
ENSCPOG00000002961	YTHDF3	100	98.120	ENSBTAG00000018557	YTHDF3	100	98.120	Bos_taurus
ENSCPOG00000002961	YTHDF3	100	99.145	ENSCJAG00000009217	YTHDF3	100	99.145	Callithrix_jacchus
ENSCPOG00000002961	YTHDF3	99	98.628	ENSCAFG00000007215	YTHDF3	99	98.628	Canis_familiaris
ENSCPOG00000002961	YTHDF3	100	99.145	ENSCAFG00020015995	YTHDF3	100	99.145	Canis_lupus_dingo
ENSCPOG00000002961	YTHDF3	100	98.291	ENSCHIG00000026460	YTHDF3	100	98.291	Capra_hircus
ENSCPOG00000002961	YTHDF3	99	98.057	ENSTSYG00000009117	YTHDF3	98	98.230	Carlito_syrichta
ENSCPOG00000002961	YTHDF3	99	99.307	ENSCAPG00000014006	YTHDF3	100	99.307	Cavia_aperea
ENSCPOG00000002961	YTHDF3	100	98.974	ENSCCAG00000022316	YTHDF3	100	98.974	Cebus_capucinus
ENSCPOG00000002961	YTHDF3	100	99.316	ENSCATG00000038669	YTHDF3	100	99.316	Cercocebus_atys
ENSCPOG00000002961	YTHDF3	99	99.827	ENSCLAG00000002515	YTHDF3	100	99.827	Chinchilla_lanigera
ENSCPOG00000002961	YTHDF3	100	99.145	ENSCSAG00000014280	YTHDF3	100	99.145	Chlorocebus_sabaeus
ENSCPOG00000002961	YTHDF3	98	98.046	ENSCHOG00000010194	YTHDF3	100	96.379	Choloepus_hoffmanni
ENSCPOG00000002961	YTHDF3	100	92.662	ENSCPBG00000021405	YTHDF3	100	91.980	Chrysemys_picta_bellii
ENSCPOG00000002961	YTHDF3	100	99.316	ENSCANG00000032631	YTHDF3	100	99.316	Colobus_angolensis_palliatus
ENSCPOG00000002961	YTHDF3	100	98.632	ENSCGRG00001021204	Ythdf3	100	98.632	Cricetulus_griseus_chok1gshd
ENSCPOG00000002961	YTHDF3	99	98.094	ENSCGRG00000005613	-	100	98.094	Cricetulus_griseus_crigri
ENSCPOG00000002961	YTHDF3	68	67.342	ENSCGRG00000008289	-	64	73.077	Cricetulus_griseus_crigri
ENSCPOG00000002961	YTHDF3	100	78.409	ENSDARG00000057939	ythdf3	100	76.268	Danio_rerio
ENSCPOG00000002961	YTHDF3	100	97.793	ENSDNOG00000037156	YTHDF3	100	97.793	Dasypus_novemcinctus
ENSCPOG00000002961	YTHDF3	100	98.803	ENSDORG00000014699	Ythdf3	100	98.803	Dipodomys_ordii
ENSCPOG00000002961	YTHDF3	99	97.007	ENSETEG00000007144	YTHDF3	100	98.070	Echinops_telfairi
ENSCPOG00000002961	YTHDF3	100	99.487	ENSEASG00005016224	YTHDF3	100	99.487	Equus_asinus_asinus
ENSCPOG00000002961	YTHDF3	100	99.487	ENSECAG00000011093	YTHDF3	100	99.487	Equus_caballus
ENSCPOG00000002961	YTHDF3	100	99.145	ENSFCAG00000025314	YTHDF3	100	99.145	Felis_catus
ENSCPOG00000002961	YTHDF3	99	93.463	ENSFALG00000005503	YTHDF3	100	92.322	Ficedula_albicollis
ENSCPOG00000002961	YTHDF3	99	99.653	ENSFDAG00000002735	YTHDF3	100	99.653	Fukomys_damarensis
ENSCPOG00000002961	YTHDF3	100	75.162	ENSFHEG00000016395	ythdf3	97	76.049	Fundulus_heteroclitus
ENSCPOG00000002961	YTHDF3	100	93.846	ENSGALG00000039774	YTHDF3	100	92.821	Gallus_gallus
ENSCPOG00000002961	YTHDF3	100	92.491	ENSGAGG00000003851	YTHDF3	100	91.809	Gopherus_agassizii
ENSCPOG00000002961	YTHDF3	99	98.938	ENSGGOG00000027681	YTHDF3	100	99.251	Gorilla_gorilla
ENSCPOG00000002961	YTHDF3	100	99.658	ENSHGLG00000009954	YTHDF3	100	99.658	Heterocephalus_glaber_female
ENSCPOG00000002961	YTHDF3	99	99.653	ENSHGLG00100012403	YTHDF3	100	99.653	Heterocephalus_glaber_male
ENSCPOG00000002961	YTHDF3	100	78.282	ENSIPUG00000014157	YTHDF1	97	78.535	Ictalurus_punctatus
ENSCPOG00000002961	YTHDF3	100	98.632	ENSSTOG00000027792	YTHDF3	100	98.632	Ictidomys_tridecemlineatus
ENSCPOG00000002961	YTHDF3	99	99.133	ENSJJAG00000017742	Ythdf3	100	99.133	Jaculus_jaculus
ENSCPOG00000002961	YTHDF3	99	84.642	ENSLACG00000002281	YTHDF3	100	83.306	Latimeria_chalumnae
ENSCPOG00000002961	YTHDF3	100	96.477	ENSLAFG00000016052	YTHDF3	100	96.477	Loxodonta_africana
ENSCPOG00000002961	YTHDF3	100	99.316	ENSMFAG00000043451	YTHDF3	100	99.316	Macaca_fascicularis
ENSCPOG00000002961	YTHDF3	100	99.316	ENSMMUG00000006729	YTHDF3	100	99.316	Macaca_mulatta
ENSCPOG00000002961	YTHDF3	100	99.316	ENSMNEG00000031200	YTHDF3	100	99.316	Macaca_nemestrina
ENSCPOG00000002961	YTHDF3	100	99.316	ENSMLEG00000036763	YTHDF3	100	99.316	Mandrillus_leucophaeus
ENSCPOG00000002961	YTHDF3	100	92.991	ENSMGAG00000011168	YTHDF3	100	91.966	Meleagris_gallopavo
ENSCPOG00000002961	YTHDF3	68	94.330	ENSMAUG00000012560	Ythdf3	99	93.299	Mesocricetus_auratus
ENSCPOG00000002961	YTHDF3	99	99.481	ENSMICG00000036869	-	99	99.117	Microcebus_murinus
ENSCPOG00000002961	YTHDF3	68	77.722	ENSMICG00000009379	-	100	75.190	Microcebus_murinus
ENSCPOG00000002961	YTHDF3	99	97.920	ENSMOCG00000011947	Ythdf3	100	97.920	Microtus_ochrogaster
ENSCPOG00000002961	YTHDF3	99	70.629	ENSMMOG00000003402	ythdf3	95	89.500	Mola_mola
ENSCPOG00000002961	YTHDF3	100	96.758	ENSMODG00000008255	YTHDF3	100	96.758	Monodelphis_domestica
ENSCPOG00000002961	YTHDF3	98	71.631	ENSMALG00000000147	ythdf3	91	92.432	Monopterus_albus
ENSCPOG00000002961	YTHDF3	100	98.462	MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.462	Mus_caroli
ENSCPOG00000002961	YTHDF3	100	98.462	ENSMUSG00000047213	Ythdf3	100	98.462	Mus_musculus
ENSCPOG00000002961	YTHDF3	100	97.949	MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	Mus_pahari
ENSCPOG00000002961	YTHDF3	100	98.291	MGP_SPRETEiJ_G0025794	Ythdf3	100	98.291	Mus_spretus
ENSCPOG00000002961	YTHDF3	100	99.145	ENSMPUG00000009857	YTHDF3	100	99.145	Mustela_putorius_furo
ENSCPOG00000002961	YTHDF3	99	98.795	ENSMLUG00000006541	YTHDF3	99	98.795	Myotis_lucifugus
ENSCPOG00000002961	YTHDF3	93	98.876	ENSNGAG00000018434	Ythdf3	96	98.694	Nannospalax_galili
ENSCPOG00000002961	YTHDF3	100	99.145	ENSNLEG00000003872	YTHDF3	100	99.145	Nomascus_leucogenys
ENSCPOG00000002961	YTHDF3	99	96.213	ENSMEUG00000011285	YTHDF3	100	96.213	Notamacropus_eugenii
ENSCPOG00000002961	YTHDF3	99	99.133	ENSODEG00000002033	YTHDF3	100	99.133	Octodon_degus
ENSCPOG00000002961	YTHDF3	99	92.943	ENSOANG00000005053	YTHDF3	100	90.706	Ornithorhynchus_anatinus
ENSCPOG00000002961	YTHDF3	100	97.647	ENSOCUG00000008723	YTHDF3	100	97.647	Oryctolagus_cuniculus
ENSCPOG00000002961	YTHDF3	100	75.243	ENSOMEG00000008212	ythdf3	99	75.815	Oryzias_melastigma
ENSCPOG00000002961	YTHDF3	99	98.801	ENSOGAG00000002302	YTHDF3	99	98.801	Otolemur_garnettii
ENSCPOG00000002961	YTHDF3	99	97.188	ENSOARG00000016882	YTHDF3	98	97.913	Ovis_aries
ENSCPOG00000002961	YTHDF3	100	98.974	ENSPPAG00000043483	YTHDF3	100	98.974	Pan_paniscus
ENSCPOG00000002961	YTHDF3	100	99.145	ENSPPRG00000004665	YTHDF3	100	99.145	Panthera_pardus
ENSCPOG00000002961	YTHDF3	99	98.413	ENSPTIG00000021537	YTHDF3	100	99.064	Panthera_tigris_altaica
ENSCPOG00000002961	YTHDF3	100	99.145	ENSPTRG00000049135	YTHDF3	100	99.145	Pan_troglodytes
ENSCPOG00000002961	YTHDF3	100	99.316	ENSPANG00000008030	YTHDF3	100	99.316	Papio_anubis
ENSCPOG00000002961	YTHDF3	99	80.517	ENSPKIG00000008298	ythdf3	96	80.885	Paramormyrops_kingsleyae
ENSCPOG00000002961	YTHDF3	100	94.710	ENSPSIG00000015861	YTHDF3	100	93.686	Pelodiscus_sinensis
ENSCPOG00000002961	YTHDF3	99	98.614	ENSPEMG00000020975	Ythdf3	100	98.614	Peromyscus_maniculatus_bairdii
ENSCPOG00000002961	YTHDF3	100	96.928	ENSPCIG00000017629	YTHDF3	100	96.928	Phascolarctos_cinereus
ENSCPOG00000002961	YTHDF3	91	100.000	ENSPPYG00000018626	YTHDF3	96	97.549	Pongo_abelii
ENSCPOG00000002961	YTHDF3	99	97.931	ENSPCAG00000016282	YTHDF3	100	97.931	Procavia_capensis
ENSCPOG00000002961	YTHDF3	100	99.487	ENSPCOG00000004856	YTHDF3	100	99.487	Propithecus_coquereli
ENSCPOG00000002961	YTHDF3	86	100.000	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
ENSCPOG00000002961	YTHDF3	88	86.957	ENSPNYG00000002949	ythdf3	96	87.156	Pundamilia_nyererei
ENSCPOG00000002961	YTHDF3	100	98.291	ENSRNOG00000010084	Ythdf3	100	98.291	Rattus_norvegicus
ENSCPOG00000002961	YTHDF3	100	99.145	ENSRBIG00000036465	YTHDF3	100	99.145	Rhinopithecus_bieti
ENSCPOG00000002961	YTHDF3	100	98.974	ENSRROG00000035231	YTHDF3	100	98.974	Rhinopithecus_roxellana
ENSCPOG00000002961	YTHDF3	100	99.145	ENSSBOG00000035287	YTHDF3	100	99.145	Saimiri_boliviensis_boliviensis
ENSCPOG00000002961	YTHDF3	100	96.082	ENSSHAG00000009482	YTHDF3	100	96.082	Sarcophilus_harrisii
ENSCPOG00000002961	YTHDF3	98	99.112	ENSSARG00000007626	YTHDF3	99	99.298	Sorex_araneus
ENSCPOG00000002961	YTHDF3	99	92.759	ENSSPUG00000009390	YTHDF3	98	92.077	Sphenodon_punctatus
ENSCPOG00000002961	YTHDF3	92	99.244	ENSSSCG00000033144	YTHDF3	100	99.438	Sus_scrofa
ENSCPOG00000002961	YTHDF3	98	93.772	ENSTGUG00000011243	YTHDF3	98	92.705	Taeniopygia_guttata
ENSCPOG00000002961	YTHDF3	79	100.000	ENSTBEG00000005747	YTHDF3	81	98.578	Tupaia_belangeri
ENSCPOG00000002961	YTHDF3	99	89.483	ENSTTRG00000014564	YTHDF3	98	88.556	Tursiops_truncatus
ENSCPOG00000002961	YTHDF3	100	99.316	ENSUAMG00000012624	YTHDF3	100	99.316	Ursus_americanus
ENSCPOG00000002961	YTHDF3	99	98.589	ENSUMAG00000014104	YTHDF3	97	99.296	Ursus_maritimus
ENSCPOG00000002961	YTHDF3	99	85.490	ENSVPAG00000008104	YTHDF3	98	84.183	Vicugna_pacos
ENSCPOG00000002961	YTHDF3	100	99.145	ENSVVUG00000018384	YTHDF3	100	99.145	Vulpes_vulpes
ENSCPOG00000002961	YTHDF3	100	88.205	ENSXETG00000021659	ythdf3	100	88.376	Xenopus_tropicalis
ENSCPOG00000002961	YTHDF3	99	73.920	ENSXCOG00000009687	ythdf3	99	76.117	Xiphophorus_couchianus
ENSCPOG00000002961	YTHDF3	100	75.447	ENSXMAG00000009698	ythdf3	99	76.460	Xiphophorus_maculatus