EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000002992 (Gene tree)
Gene ID: 100718659
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 10123 bases
Position: chrDS562911.1:4130612-4140734
Accession: 100718659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002715	UPF0086	PF01868.16	5.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003031	POP4-201	1556	XM_003466528	ENSCPOP00000002715	220 (aa)	XP_003466576	H0UZU4

Gene Model

Click here to download ENSCPOG00000002992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000002992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000002992	POP4	100	87.273	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSCPOG00000002992	POP4	97	73.023	ENSAMEG00000003172	-	97	73.023	Ailuropoda_melanoleuca
ENSCPOG00000002992	POP4	99	84.404	ENSAMEG00000018329	-	99	84.404	Ailuropoda_melanoleuca
ENSCPOG00000002992	POP4	92	62.621	ENSACIG00000008358	pop4	93	64.103	Amphilophus_citrinellus
ENSCPOG00000002992	POP4	89	62.944	ENSAOCG00000010116	pop4	96	62.437	Amphiprion_ocellaris
ENSCPOG00000002992	POP4	89	62.437	ENSAPEG00000002829	pop4	83	61.929	Amphiprion_percula
ENSCPOG00000002992	POP4	89	62.944	ENSATEG00000013028	pop4	89	62.437	Anabas_testudineus
ENSCPOG00000002992	POP4	92	71.782	ENSAPLG00000014051	POP4	98	71.782	Anas_platyrhynchos
ENSCPOG00000002992	POP4	100	85.455	ENSANAG00000020295	POP4	100	85.455	Aotus_nancymaae
ENSCPOG00000002992	POP4	92	60.194	ENSACLG00000000526	pop4	93	60.194	Astatotilapia_calliptera
ENSCPOG00000002992	POP4	100	61.364	ENSAMXG00000002899	pop4	100	61.364	Astyanax_mexicanus
ENSCPOG00000002992	POP4	100	88.636	ENSBTAG00000002223	POP4	100	88.636	Bos_taurus
ENSCPOG00000002992	POP4	100	85.068	ENSCJAG00000046750	POP4	100	87.222	Callithrix_jacchus
ENSCPOG00000002992	POP4	83	90.110	ENSCAFG00000007630	POP4	100	90.110	Canis_familiaris
ENSCPOG00000002992	POP4	100	88.182	ENSCHIG00000016743	POP4	100	88.182	Capra_hircus
ENSCPOG00000002992	POP4	100	87.727	ENSTSYG00000003488	POP4	100	87.727	Carlito_syrichta
ENSCPOG00000002992	POP4	99	77.419	ENSCAPG00000011105	POP4	100	77.419	Cavia_aperea
ENSCPOG00000002992	POP4	100	74.545	ENSCCAG00000034244	-	100	74.545	Cebus_capucinus
ENSCPOG00000002992	POP4	100	86.364	ENSCCAG00000020285	-	100	86.364	Cebus_capucinus
ENSCPOG00000002992	POP4	100	88.182	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSCPOG00000002992	POP4	100	95.909	ENSCLAG00000013162	POP4	100	95.909	Chinchilla_lanigera
ENSCPOG00000002992	POP4	99	87.156	ENSCSAG00000004868	POP4	100	87.156	Chlorocebus_sabaeus
ENSCPOG00000002992	POP4	99	64.516	ENSCHOG00000002071	POP4	100	64.516	Choloepus_hoffmanni
ENSCPOG00000002992	POP4	100	70.000	ENSCPBG00000016132	POP4	100	70.000	Chrysemys_picta_bellii
ENSCPOG00000002992	POP4	88	33.166	ENSCING00000023871	-	98	33.166	Ciona_intestinalis
ENSCPOG00000002992	POP4	90	89.848	ENSCANG00000005924	POP4	98	89.848	Colobus_angolensis_palliatus
ENSCPOG00000002992	POP4	100	85.000	ENSCGRG00001017185	Pop4	100	84.545	Cricetulus_griseus_chok1gshd
ENSCPOG00000002992	POP4	100	85.000	ENSCGRG00000008155	Pop4	100	84.545	Cricetulus_griseus_crigri
ENSCPOG00000002992	POP4	94	52.153	ENSCSEG00000002946	pop4	94	51.442	Cynoglossus_semilaevis
ENSCPOG00000002992	POP4	89	46.701	ENSCVAG00000018602	POP4	85	44.388	Cyprinodon_variegatus
ENSCPOG00000002992	POP4	100	63.182	ENSDARG00000101472	pop4	100	63.182	Danio_rerio
ENSCPOG00000002992	POP4	100	87.727	ENSDNOG00000047663	POP4	88	87.727	Dasypus_novemcinctus
ENSCPOG00000002992	POP4	78	83.140	ENSDORG00000008577	Pop4	100	83.140	Dipodomys_ordii
ENSCPOG00000002992	POP4	69	37.975	FBgn0035831	CG8038	71	38.356	Drosophila_melanogaster
ENSCPOG00000002992	POP4	99	72.350	ENSETEG00000003607	POP4	100	72.350	Echinops_telfairi
ENSCPOG00000002992	POP4	100	43.439	ENSEBUG00000008575	pop4	100	42.986	Eptatretus_burgeri
ENSCPOG00000002992	POP4	91	47.664	ENSEBUG00000010447	pop4	83	47.664	Eptatretus_burgeri
ENSCPOG00000002992	POP4	100	40.773	ENSEBUG00000004305	pop4	100	40.773	Eptatretus_burgeri
ENSCPOG00000002992	POP4	100	86.286	ENSECAG00000020206	POP4	82	84.615	Equus_caballus
ENSCPOG00000002992	POP4	90	65.152	ENSEEUG00000013109	POP4	99	65.152	Erinaceus_europaeus
ENSCPOG00000002992	POP4	89	65.816	ENSELUG00000019812	pop4	89	65.816	Esox_lucius
ENSCPOG00000002992	POP4	100	86.364	ENSFCAG00000001619	POP4	100	86.364	Felis_catus
ENSCPOG00000002992	POP4	98	68.056	ENSFALG00000000206	POP4	96	68.056	Ficedula_albicollis
ENSCPOG00000002992	POP4	100	94.545	ENSFDAG00000017859	POP4	100	94.545	Fukomys_damarensis
ENSCPOG00000002992	POP4	92	54.854	ENSFHEG00000012745	pop4	93	54.369	Fundulus_heteroclitus
ENSCPOG00000002992	POP4	91	63.366	ENSGMOG00000000335	pop4	99	63.366	Gadus_morhua
ENSCPOG00000002992	POP4	100	66.364	ENSGALG00000041972	POP4	92	66.364	Gallus_gallus
ENSCPOG00000002992	POP4	78	49.425	ENSGAFG00000003571	pop4	96	49.425	Gambusia_affinis
ENSCPOG00000002992	POP4	94	58.852	ENSGACG00000014510	pop4	93	66.279	Gasterosteus_aculeatus
ENSCPOG00000002992	POP4	100	71.364	ENSGAGG00000024544	POP4	79	71.364	Gopherus_agassizii
ENSCPOG00000002992	POP4	99	87.156	ENSGGOG00000038346	POP4	99	87.156	Gorilla_gorilla
ENSCPOG00000002992	POP4	92	60.194	ENSHBUG00000021821	pop4	93	60.194	Haplochromis_burtoni
ENSCPOG00000002992	POP4	99	94.954	ENSHGLG00000015798	POP4	99	94.954	Heterocephalus_glaber_female
ENSCPOG00000002992	POP4	100	94.545	ENSHGLG00100009737	POP4	100	94.545	Heterocephalus_glaber_male
ENSCPOG00000002992	POP4	89	63.077	ENSHCOG00000020937	pop4	88	63.077	Hippocampus_comes
ENSCPOG00000002992	POP4	100	61.364	ENSIPUG00000013652	pop4	100	61.364	Ictalurus_punctatus
ENSCPOG00000002992	POP4	100	90.455	ENSSTOG00000011016	POP4	100	90.455	Ictidomys_tridecemlineatus
ENSCPOG00000002992	POP4	100	90.909	ENSJJAG00000013376	Pop4	100	90.909	Jaculus_jaculus
ENSCPOG00000002992	POP4	98	60.092	ENSKMAG00000012250	pop4	98	59.633	Kryptolebias_marmoratus
ENSCPOG00000002992	POP4	99	55.204	ENSLBEG00000014139	pop4	99	55.455	Labrus_bergylta
ENSCPOG00000002992	POP4	99	55.656	ENSLBEG00000018846	-	99	55.909	Labrus_bergylta
ENSCPOG00000002992	POP4	99	62.212	ENSLACG00000008581	POP4	98	62.212	Latimeria_chalumnae
ENSCPOG00000002992	POP4	100	66.818	ENSLOCG00000005597	pop4	100	66.818	Lepisosteus_oculatus
ENSCPOG00000002992	POP4	100	87.273	ENSLAFG00000000084	POP4	100	87.273	Loxodonta_africana
ENSCPOG00000002992	POP4	100	87.727	ENSMFAG00000029606	POP4	100	87.727	Macaca_fascicularis
ENSCPOG00000002992	POP4	100	86.425	ENSMMUG00000017424	POP4	100	85.068	Macaca_mulatta
ENSCPOG00000002992	POP4	100	87.330	ENSMNEG00000031374	POP4	100	85.973	Macaca_nemestrina
ENSCPOG00000002992	POP4	100	86.364	ENSMLEG00000043454	POP4	100	86.364	Mandrillus_leucophaeus
ENSCPOG00000002992	POP4	85	65.426	ENSMAMG00000011716	pop4	93	61.972	Mastacembelus_armatus
ENSCPOG00000002992	POP4	92	60.194	ENSMZEG00005002360	pop4	93	60.194	Maylandia_zebra
ENSCPOG00000002992	POP4	99	66.514	ENSMGAG00000005337	POP4	97	66.514	Meleagris_gallopavo
ENSCPOG00000002992	POP4	100	86.364	ENSMAUG00000020110	Pop4	100	86.364	Mesocricetus_auratus
ENSCPOG00000002992	POP4	99	82.569	ENSMICG00000035730	POP4	98	82.569	Microcebus_murinus
ENSCPOG00000002992	POP4	99	57.991	ENSMMOG00000015321	pop4	99	58.257	Mola_mola
ENSCPOG00000002992	POP4	98	77.778	ENSMODG00000029406	POP4	94	77.778	Monodelphis_domestica
ENSCPOG00000002992	POP4	95	61.905	ENSMALG00000012571	pop4	94	62.319	Monopterus_albus
ENSCPOG00000002992	POP4	100	84.615	MGP_CAROLIEiJ_G0029600	Pop4	100	84.615	Mus_caroli
ENSCPOG00000002992	POP4	100	85.068	ENSMUSG00000030423	Pop4	100	84.615	Mus_musculus
ENSCPOG00000002992	POP4	100	85.000	MGP_SPRETEiJ_G0030699	Pop4	100	84.091	Mus_spretus
ENSCPOG00000002992	POP4	100	74.208	ENSMPUG00000008063	-	100	74.208	Mustela_putorius_furo
ENSCPOG00000002992	POP4	100	87.273	ENSMPUG00000008041	-	100	87.273	Mustela_putorius_furo
ENSCPOG00000002992	POP4	99	66.667	ENSMLUG00000010774	POP4	99	66.667	Myotis_lucifugus
ENSCPOG00000002992	POP4	57	84.000	ENSMEUG00000003636	-	100	84.000	Notamacropus_eugenii
ENSCPOG00000002992	POP4	91	89.500	ENSOPRG00000004736	POP4	100	89.500	Ochotona_princeps
ENSCPOG00000002992	POP4	99	96.774	ENSODEG00000013025	POP4	100	96.698	Octodon_degus
ENSCPOG00000002992	POP4	92	59.709	ENSONIG00000003458	pop4	92	59.709	Oreochromis_niloticus
ENSCPOG00000002992	POP4	100	88.182	ENSOCUG00000015974	POP4	100	88.182	Oryctolagus_cuniculus
ENSCPOG00000002992	POP4	90	60.804	ENSORLG00000020317	pop4	90	60.804	Oryzias_latipes
ENSCPOG00000002992	POP4	94	59.135	ENSORLG00015011624	pop4	93	59.135	Oryzias_latipes_hsok
ENSCPOG00000002992	POP4	94	60.096	ENSOMEG00000002538	pop4	93	60.096	Oryzias_melastigma
ENSCPOG00000002992	POP4	99	88.073	ENSOGAG00000011168	POP4	99	88.073	Otolemur_garnettii
ENSCPOG00000002992	POP4	100	88.688	ENSOARG00000004041	POP4	100	88.688	Ovis_aries
ENSCPOG00000002992	POP4	100	87.727	ENSPPAG00000040372	POP4	100	87.727	Pan_paniscus
ENSCPOG00000002992	POP4	100	86.364	ENSPPRG00000010502	POP4	100	86.364	Panthera_pardus
ENSCPOG00000002992	POP4	100	86.364	ENSPTIG00000016598	POP4	100	86.364	Panthera_tigris_altaica
ENSCPOG00000002992	POP4	100	87.727	ENSPTRG00000010779	POP4	100	87.727	Pan_troglodytes
ENSCPOG00000002992	POP4	100	87.727	ENSPANG00000008546	POP4	100	87.727	Papio_anubis
ENSCPOG00000002992	POP4	89	68.000	ENSPKIG00000004468	pop4	87	67.172	Paramormyrops_kingsleyae
ENSCPOG00000002992	POP4	100	70.909	ENSPSIG00000015690	POP4	96	76.804	Pelodiscus_sinensis
ENSCPOG00000002992	POP4	89	58.500	ENSPMGG00000008608	pop4	96	58.000	Periophthalmus_magnuspinnatus
ENSCPOG00000002992	POP4	99	70.642	ENSPEMG00000019982	-	100	70.642	Peromyscus_maniculatus_bairdii
ENSCPOG00000002992	POP4	100	84.545	ENSPEMG00000014034	-	96	84.545	Peromyscus_maniculatus_bairdii
ENSCPOG00000002992	POP4	83	56.566	ENSPMAG00000006265	pop4	100	55.556	Petromyzon_marinus
ENSCPOG00000002992	POP4	100	76.364	ENSPCIG00000024738	POP4	95	76.364	Phascolarctos_cinereus
ENSCPOG00000002992	POP4	89	59.898	ENSPFOG00000000925	pop4	88	59.184	Poecilia_formosa
ENSCPOG00000002992	POP4	89	59.898	ENSPLAG00000003161	pop4	88	59.184	Poecilia_latipinna
ENSCPOG00000002992	POP4	89	59.898	ENSPMEG00000002475	pop4	88	59.184	Poecilia_mexicana
ENSCPOG00000002992	POP4	92	57.843	ENSPREG00000022403	pop4	88	56.650	Poecilia_reticulata
ENSCPOG00000002992	POP4	100	88.182	ENSPPYG00000009805	POP4	100	88.182	Pongo_abelii
ENSCPOG00000002992	POP4	99	77.169	ENSPCAG00000007737	POP4	99	77.169	Procavia_capensis
ENSCPOG00000002992	POP4	100	88.182	ENSPCOG00000018055	POP4	100	88.182	Propithecus_coquereli
ENSCPOG00000002992	POP4	100	83.636	ENSPVAG00000006069	POP4	100	83.636	Pteropus_vampyrus
ENSCPOG00000002992	POP4	92	60.680	ENSPNYG00000020038	pop4	93	60.680	Pundamilia_nyererei
ENSCPOG00000002992	POP4	100	63.182	ENSPNAG00000005591	pop4	100	63.182	Pygocentrus_nattereri
ENSCPOG00000002992	POP4	100	85.068	ENSRNOG00000027646	Pop4	100	85.068	Rattus_norvegicus
ENSCPOG00000002992	POP4	80	83.429	ENSRBIG00000044769	POP4	90	88.489	Rhinopithecus_bieti
ENSCPOG00000002992	POP4	100	87.273	ENSRROG00000028903	POP4	100	87.273	Rhinopithecus_roxellana
ENSCPOG00000002992	POP4	57	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSCPOG00000002992	POP4	100	86.364	ENSSBOG00000032445	POP4	100	86.364	Saimiri_boliviensis_boliviensis
ENSCPOG00000002992	POP4	99	77.523	ENSSHAG00000016888	POP4	99	77.523	Sarcophilus_harrisii
ENSCPOG00000002992	POP4	92	67.327	ENSSFOG00015014556	pop4	90	66.832	Scleropages_formosus
ENSCPOG00000002992	POP4	93	63.033	ENSSMAG00000016611	pop4	99	62.559	Scophthalmus_maximus
ENSCPOG00000002992	POP4	94	60.287	ENSSDUG00000019865	pop4	84	60.096	Seriola_dumerili
ENSCPOG00000002992	POP4	99	59.545	ENSSLDG00000001763	pop4	93	60.096	Seriola_lalandi_dorsalis
ENSCPOG00000002992	POP4	99	84.793	ENSSARG00000004748	POP4	100	84.793	Sorex_araneus
ENSCPOG00000002992	POP4	100	59.910	ENSSPAG00000014364	pop4	97	59.459	Stegastes_partitus
ENSCPOG00000002992	POP4	100	88.182	ENSSSCG00000002854	POP4	100	88.182	Sus_scrofa
ENSCPOG00000002992	POP4	89	72.959	ENSTGUG00000008953	POP4	99	72.589	Taeniopygia_guttata
ENSCPOG00000002992	POP4	88	61.538	ENSTNIG00000006401	pop4	96	60.000	Tetraodon_nigroviridis
ENSCPOG00000002992	POP4	100	87.330	ENSTBEG00000002194	POP4	100	88.688	Tupaia_belangeri
ENSCPOG00000002992	POP4	100	85.909	ENSTTRG00000005882	POP4	100	85.909	Tursiops_truncatus
ENSCPOG00000002992	POP4	100	85.455	ENSUAMG00000003049	-	100	85.455	Ursus_americanus
ENSCPOG00000002992	POP4	100	85.455	ENSUMAG00000007522	-	100	85.455	Ursus_maritimus
ENSCPOG00000002992	POP4	91	87.562	ENSVVUG00000016876	-	70	87.562	Vulpes_vulpes
ENSCPOG00000002992	POP4	98	68.519	ENSXETG00000017598	pop4	98	67.130	Xenopus_tropicalis
ENSCPOG00000002992	POP4	92	58.738	ENSXCOG00000017695	pop4	88	57.073	Xiphophorus_couchianus
ENSCPOG00000002992	POP4	92	58.738	ENSXMAG00000013862	pop4	88	57.073	Xiphophorus_maculatus