EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003043 (Gene tree)
Gene ID: 100722395
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 41959 bases
Position: chrDS562990.1:2890525-2932483
Accession: 100722395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002758	ResIII	PF04851.15	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003084	HELLS-201	6421	XM_003462397	ENSCPOP00000002758	838 (aa)	XP_003462445	H0UZY1

Gene Model

Click here to download ENSCPOG00000003043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003043	HELLS	66	46.241	ENSCPOG00000013601	SMARCA1	55	45.714
ENSCPOG00000003043	HELLS	64	38.043	ENSCPOG00000011398	SMARCAD1	50	38.043
ENSCPOG00000003043	HELLS	63	30.147	ENSCPOG00000011643	-	55	30.147
ENSCPOG00000003043	HELLS	64	38.716	ENSCPOG00000009000	CHD1L	52	38.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003043	HELLS	100	93.198	ENSG00000119969	HELLS	100	93.697	Homo_sapiens
ENSCPOG00000003043	HELLS	93	66.158	ENSAPOG00000007707	hells	99	64.303	Acanthochromis_polyacanthus
ENSCPOG00000003043	HELLS	100	92.372	ENSAMEG00000013525	HELLS	100	92.491	Ailuropoda_melanoleuca
ENSCPOG00000003043	HELLS	81	68.029	ENSACIG00000018996	hells	99	66.996	Amphilophus_citrinellus
ENSCPOG00000003043	HELLS	96	65.799	ENSAOCG00000006348	hells	98	65.024	Amphiprion_ocellaris
ENSCPOG00000003043	HELLS	96	65.304	ENSAPEG00000001422	hells	98	64.303	Amphiprion_percula
ENSCPOG00000003043	HELLS	97	65.394	ENSATEG00000008107	hells	99	64.049	Anabas_testudineus
ENSCPOG00000003043	HELLS	93	81.552	ENSAPLG00000002649	HELLS	99	81.043	Anas_platyrhynchos
ENSCPOG00000003043	HELLS	86	75.139	ENSACAG00000028785	HELLS	96	75.139	Anolis_carolinensis
ENSCPOG00000003043	HELLS	100	92.005	ENSANAG00000034765	-	100	92.005	Aotus_nancymaae
ENSCPOG00000003043	HELLS	97	63.704	ENSACLG00000007613	hells	99	63.580	Astatotilapia_calliptera
ENSCPOG00000003043	HELLS	82	66.377	ENSAMXG00000002088	hells	99	66.143	Astyanax_mexicanus
ENSCPOG00000003043	HELLS	80	92.101	ENSBTAG00000005979	HELLS	100	92.101	Bos_taurus
ENSCPOG00000003043	HELLS	100	91.885	ENSCJAG00000015819	HELLS	100	91.885	Callithrix_jacchus
ENSCPOG00000003043	HELLS	100	92.253	ENSCAFG00000008090	HELLS	100	92.253	Canis_familiaris
ENSCPOG00000003043	HELLS	94	93.011	ENSCAFG00020004809	HELLS	98	93.139	Canis_lupus_dingo
ENSCPOG00000003043	HELLS	100	88.783	ENSCHIG00000019462	HELLS	100	88.783	Capra_hircus
ENSCPOG00000003043	HELLS	98	91.363	ENSTSYG00000005811	-	99	91.363	Carlito_syrichta
ENSCPOG00000003043	HELLS	55	93.714	ENSCCAG00000026761	HELLS	97	93.714	Cebus_capucinus
ENSCPOG00000003043	HELLS	100	88.009	ENSCATG00000033830	HELLS	100	93.417	Cercocebus_atys
ENSCPOG00000003043	HELLS	100	96.301	ENSCLAG00000003938	HELLS	100	96.350	Chinchilla_lanigera
ENSCPOG00000003043	HELLS	85	93.277	ENSCSAG00000006181	HELLS	100	93.277	Chlorocebus_sabaeus
ENSCPOG00000003043	HELLS	85	81.564	ENSCPBG00000025739	HELLS	99	83.456	Chrysemys_picta_bellii
ENSCPOG00000003043	HELLS	100	87.783	ENSCANG00000037736	HELLS	100	93.137	Colobus_angolensis_palliatus
ENSCPOG00000003043	HELLS	100	88.561	ENSCGRG00001017410	Hells	100	88.561	Cricetulus_griseus_chok1gshd
ENSCPOG00000003043	HELLS	96	61.751	ENSCSEG00000016985	hells	99	64.359	Cynoglossus_semilaevis
ENSCPOG00000003043	HELLS	63	62.429	ENSCVAG00000000159	hells	97	62.547	Cyprinodon_variegatus
ENSCPOG00000003043	HELLS	93	65.657	ENSDARG00000057738	hells	97	64.455	Danio_rerio
ENSCPOG00000003043	HELLS	76	92.417	ENSDNOG00000017758	HELLS	100	92.417	Dasypus_novemcinctus
ENSCPOG00000003043	HELLS	100	90.573	ENSDORG00000011812	Hells	100	90.573	Dipodomys_ordii
ENSCPOG00000003043	HELLS	63	71.631	ENSEBUG00000016152	hells	88	71.631	Eptatretus_burgeri
ENSCPOG00000003043	HELLS	100	92.253	ENSEASG00005011764	HELLS	100	92.253	Equus_asinus_asinus
ENSCPOG00000003043	HELLS	100	92.124	ENSECAG00000018810	HELLS	100	92.124	Equus_caballus
ENSCPOG00000003043	HELLS	81	95.652	ENSEEUG00000007680	HELLS	91	95.652	Erinaceus_europaeus
ENSCPOG00000003043	HELLS	98	63.385	ENSELUG00000014909	hells	96	62.905	Esox_lucius
ENSCPOG00000003043	HELLS	85	93.277	ENSFCAG00000005206	HELLS	100	93.277	Felis_catus
ENSCPOG00000003043	HELLS	98	81.630	ENSFALG00000007136	HELLS	99	81.022	Ficedula_albicollis
ENSCPOG00000003043	HELLS	98	94.526	ENSFDAG00000010042	HELLS	100	95.012	Fukomys_damarensis
ENSCPOG00000003043	HELLS	99	63.057	ENSFHEG00000022950	hells	97	63.725	Fundulus_heteroclitus
ENSCPOG00000003043	HELLS	99	76.969	ENSGALG00000005451	HELLS	100	82.546	Gallus_gallus
ENSCPOG00000003043	HELLS	99	62.936	ENSGAFG00000001204	hells	96	62.350	Gambusia_affinis
ENSCPOG00000003043	HELLS	99	62.036	ENSGACG00000003897	hells	91	64.955	Gasterosteus_aculeatus
ENSCPOG00000003043	HELLS	85	81.259	ENSGAGG00000010269	HELLS	100	82.951	Gopherus_agassizii
ENSCPOG00000003043	HELLS	100	88.663	ENSGGOG00000008103	HELLS	100	93.417	Gorilla_gorilla
ENSCPOG00000003043	HELLS	99	63.766	ENSHBUG00000010270	hells	99	63.580	Haplochromis_burtoni
ENSCPOG00000003043	HELLS	72	93.558	ENSHGLG00000006537	-	100	93.558	Heterocephalus_glaber_female
ENSCPOG00000003043	HELLS	98	96.350	ENSHGLG00000011377	-	100	96.350	Heterocephalus_glaber_female
ENSCPOG00000003043	HELLS	98	96.107	ENSHGLG00100017230	-	100	96.107	Heterocephalus_glaber_male
ENSCPOG00000003043	HELLS	87	85.597	ENSHGLG00100001957	-	95	85.597	Heterocephalus_glaber_male
ENSCPOG00000003043	HELLS	84	65.493	ENSHCOG00000001119	hells	96	65.493	Hippocampus_comes
ENSCPOG00000003043	HELLS	99	63.690	ENSIPUG00000002634	HELLS	97	63.690	Ictalurus_punctatus
ENSCPOG00000003043	HELLS	98	93.066	ENSSTOG00000021976	HELLS	100	93.066	Ictidomys_tridecemlineatus
ENSCPOG00000003043	HELLS	100	84.129	ENSJJAG00000000865	Hells	99	85.767	Jaculus_jaculus
ENSCPOG00000003043	HELLS	98	65.937	ENSKMAG00000017279	hells	96	65.745	Kryptolebias_marmoratus
ENSCPOG00000003043	HELLS	99	64.656	ENSLBEG00000027807	hells	96	64.656	Labrus_bergylta
ENSCPOG00000003043	HELLS	98	92.579	ENSLAFG00000007049	HELLS	100	92.579	Loxodonta_africana
ENSCPOG00000003043	HELLS	100	92.840	ENSMFAG00000044053	HELLS	100	92.840	Macaca_fascicularis
ENSCPOG00000003043	HELLS	100	85.068	ENSMMUG00000017255	HELLS	100	93.362	Macaca_mulatta
ENSCPOG00000003043	HELLS	100	88.009	ENSMNEG00000042628	HELLS	100	93.417	Macaca_nemestrina
ENSCPOG00000003043	HELLS	100	92.840	ENSMLEG00000041751	HELLS	100	92.840	Mandrillus_leucophaeus
ENSCPOG00000003043	HELLS	93	64.713	ENSMAMG00000009850	hells	98	67.246	Mastacembelus_armatus
ENSCPOG00000003043	HELLS	99	64.183	ENSMZEG00005018414	hells	99	63.580	Maylandia_zebra
ENSCPOG00000003043	HELLS	95	80.248	ENSMGAG00000006818	HELLS	97	82.805	Meleagris_gallopavo
ENSCPOG00000003043	HELLS	96	87.406	ENSMAUG00000021941	Hells	97	87.719	Mesocricetus_auratus
ENSCPOG00000003043	HELLS	68	91.463	ENSMICG00000046554	-	95	91.463	Microcebus_murinus
ENSCPOG00000003043	HELLS	98	88.078	ENSMOCG00000019342	Hells	100	88.078	Microtus_ochrogaster
ENSCPOG00000003043	HELLS	97	60.317	ENSMMOG00000007950	hells	97	59.855	Mola_mola
ENSCPOG00000003043	HELLS	96	82.836	ENSMODG00000005589	-	51	83.229	Monodelphis_domestica
ENSCPOG00000003043	HELLS	97	61.852	ENSMALG00000010244	hells	94	61.728	Monopterus_albus
ENSCPOG00000003043	HELLS	98	89.538	MGP_CAROLIEiJ_G0022930	Hells	100	89.538	Mus_caroli
ENSCPOG00000003043	HELLS	98	89.173	ENSMUSG00000025001	Hells	100	89.173	Mus_musculus
ENSCPOG00000003043	HELLS	98	90.268	MGP_PahariEiJ_G0014423	Hells	100	90.268	Mus_pahari
ENSCPOG00000003043	HELLS	98	89.659	MGP_SPRETEiJ_G0023848	Hells	100	89.659	Mus_spretus
ENSCPOG00000003043	HELLS	100	92.363	ENSMPUG00000017131	HELLS	100	92.363	Mustela_putorius_furo
ENSCPOG00000003043	HELLS	100	89.499	ENSMLUG00000030511	HELLS	100	89.499	Myotis_lucifugus
ENSCPOG00000003043	HELLS	100	89.857	ENSNGAG00000014049	Hells	100	89.857	Nannospalax_galili
ENSCPOG00000003043	HELLS	97	60.837	ENSNBRG00000024242	hells	99	60.837	Neolamprologus_brichardi
ENSCPOG00000003043	HELLS	100	87.896	ENSNLEG00000012987	HELLS	100	93.417	Nomascus_leucogenys
ENSCPOG00000003043	HELLS	100	93.079	ENSODEG00000015916	HELLS	100	93.079	Octodon_degus
ENSCPOG00000003043	HELLS	99	64.062	ENSONIG00000013166	hells	96	64.183	Oreochromis_niloticus
ENSCPOG00000003043	HELLS	98	83.414	ENSOANG00000005139	HELLS	100	83.414	Ornithorhynchus_anatinus
ENSCPOG00000003043	HELLS	100	92.363	ENSOCUG00000026731	HELLS	100	92.363	Oryctolagus_cuniculus
ENSCPOG00000003043	HELLS	99	62.605	ENSORLG00000000987	hells	97	62.864	Oryzias_latipes
ENSCPOG00000003043	HELLS	98	62.878	ENSORLG00020003952	hells	97	62.257	Oryzias_latipes_hni
ENSCPOG00000003043	HELLS	97	63.882	ENSORLG00015010960	hells	96	62.762	Oryzias_latipes_hsok
ENSCPOG00000003043	HELLS	97	63.492	ENSOMEG00000000135	hells	94	63.858	Oryzias_melastigma
ENSCPOG00000003043	HELLS	99	91.304	ENSOGAG00000017145	HELLS	99	91.304	Otolemur_garnettii
ENSCPOG00000003043	HELLS	100	91.766	ENSOARG00000004495	HELLS	100	91.766	Ovis_aries
ENSCPOG00000003043	HELLS	100	88.663	ENSPPAG00000001726	HELLS	100	93.417	Pan_paniscus
ENSCPOG00000003043	HELLS	85	93.277	ENSPPRG00000005839	HELLS	100	93.417	Panthera_pardus
ENSCPOG00000003043	HELLS	100	92.363	ENSPTIG00000007647	HELLS	100	93.417	Panthera_tigris_altaica
ENSCPOG00000003043	HELLS	100	88.663	ENSPTRG00000002778	HELLS	99	92.704	Pan_troglodytes
ENSCPOG00000003043	HELLS	100	88.009	ENSPANG00000033528	HELLS	100	93.417	Papio_anubis
ENSCPOG00000003043	HELLS	99	63.170	ENSPKIG00000010890	hells	98	62.945	Paramormyrops_kingsleyae
ENSCPOG00000003043	HELLS	94	80.706	ENSPSIG00000005462	HELLS	100	80.832	Pelodiscus_sinensis
ENSCPOG00000003043	HELLS	96	59.902	ENSPMGG00000014690	hells	98	66.279	Periophthalmus_magnuspinnatus
ENSCPOG00000003043	HELLS	100	81.384	ENSPEMG00000017579	Hells	100	82.725	Peromyscus_maniculatus_bairdii
ENSCPOG00000003043	HELLS	95	60.772	ENSPMAG00000004376	hells	96	60.772	Petromyzon_marinus
ENSCPOG00000003043	HELLS	100	83.472	ENSPCIG00000013361	HELLS	100	83.472	Phascolarctos_cinereus
ENSCPOG00000003043	HELLS	99	61.733	ENSPFOG00000001954	hells	96	62.335	Poecilia_formosa
ENSCPOG00000003043	HELLS	99	61.613	ENSPLAG00000006504	hells	97	63.624	Poecilia_latipinna
ENSCPOG00000003043	HELLS	99	61.733	ENSPMEG00000003024	hells	97	63.764	Poecilia_mexicana
ENSCPOG00000003043	HELLS	99	61.733	ENSPREG00000020337	hells	96	62.335	Poecilia_reticulata
ENSCPOG00000003043	HELLS	100	88.235	ENSPPYG00000002502	HELLS	100	88.235	Pongo_abelii
ENSCPOG00000003043	HELLS	100	85.084	ENSPCAG00000013618	HELLS	100	85.084	Procavia_capensis
ENSCPOG00000003043	HELLS	100	89.138	ENSPCOG00000023985	HELLS	100	92.961	Propithecus_coquereli
ENSCPOG00000003043	HELLS	92	96.133	ENSPVAG00000017899	HELLS	92	96.133	Pteropus_vampyrus
ENSCPOG00000003043	HELLS	97	62.423	ENSPNYG00000009100	hells	99	62.423	Pundamilia_nyererei
ENSCPOG00000003043	HELLS	97	63.145	ENSPNAG00000029968	hells	99	62.301	Pygocentrus_nattereri
ENSCPOG00000003043	HELLS	100	89.618	ENSRNOG00000047692	LOC100911660	100	89.903	Rattus_norvegicus
ENSCPOG00000003043	HELLS	100	89.618	ENSRNOG00000047104	Hells	100	89.618	Rattus_norvegicus
ENSCPOG00000003043	HELLS	100	86.932	ENSRBIG00000041080	HELLS	99	93.491	Rhinopithecus_bieti
ENSCPOG00000003043	HELLS	100	88.444	ENSRROG00000040169	HELLS	100	93.277	Rhinopithecus_roxellana
ENSCPOG00000003043	HELLS	98	83.636	ENSSHAG00000014358	HELLS	100	83.636	Sarcophilus_harrisii
ENSCPOG00000003043	HELLS	95	67.293	ENSSFOG00015017895	hells	98	66.707	Scleropages_formosus
ENSCPOG00000003043	HELLS	99	63.702	ENSSMAG00000017423	hells	99	63.100	Scophthalmus_maximus
ENSCPOG00000003043	HELLS	97	66.010	ENSSDUG00000016924	hells	99	64.356	Seriola_dumerili
ENSCPOG00000003043	HELLS	97	63.502	ENSSLDG00000018960	hells	96	62.455	Seriola_lalandi_dorsalis
ENSCPOG00000003043	HELLS	98	78.736	ENSSPUG00000017425	HELLS	100	80.025	Sphenodon_punctatus
ENSCPOG00000003043	HELLS	96	65.136	ENSSPAG00000015579	hells	99	66.279	Stegastes_partitus
ENSCPOG00000003043	HELLS	100	93.198	ENSSSCG00000010486	HELLS	100	93.198	Sus_scrofa
ENSCPOG00000003043	HELLS	99	81.303	ENSTGUG00000007157	HELLS	99	80.820	Taeniopygia_guttata
ENSCPOG00000003043	HELLS	93	66.879	ENSTRUG00000000350	hells	97	64.748	Takifugu_rubripes
ENSCPOG00000003043	HELLS	98	55.767	ENSTNIG00000003738	hells	98	57.249	Tetraodon_nigroviridis
ENSCPOG00000003043	HELLS	98	92.457	ENSUAMG00000003343	HELLS	100	92.457	Ursus_americanus
ENSCPOG00000003043	HELLS	99	92.633	ENSUMAG00000004748	HELLS	99	92.754	Ursus_maritimus
ENSCPOG00000003043	HELLS	100	91.050	ENSVPAG00000010115	HELLS	100	91.169	Vicugna_pacos
ENSCPOG00000003043	HELLS	100	92.482	ENSVVUG00000022808	HELLS	100	92.601	Vulpes_vulpes
ENSCPOG00000003043	HELLS	98	61.604	ENSXCOG00000013840	hells	98	61.725	Xiphophorus_couchianus
ENSCPOG00000003043	HELLS	99	62.139	ENSXMAG00000005731	hells	97	64.225	Xiphophorus_maculatus