EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003088 (Gene tree)
Gene ID: 100729025
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 4457 bases
Position: chrDS562859.1:45365490-45369946
Accession: 100729025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002796	MMR_HSR1	PF01926.23	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003131	SEPT1-201	1774	XM_013142279	ENSCPOP00000002796	369 (aa)	XP_012997733	H0V017

Gene Model

Click here to download ENSCPOG00000003088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003088	SEPT1	90	50.301	ENSCPOG00000012518	SEPT7	76	48.844
ENSCPOG00000003088	SEPT1	80	41.414	ENSCPOG00000004533	SEPT10	65	41.414
ENSCPOG00000003088	SEPT1	94	62.248	ENSCPOG00000010483	-	92	63.739
ENSCPOG00000003088	SEPT1	92	40.816	ENSCPOG00000007247	SEPT8	84	38.843
ENSCPOG00000003088	SEPT1	79	39.384	ENSCPOG00000004011	-	79	39.384
ENSCPOG00000003088	SEPT1	79	45.918	ENSCPOG00000013212	-	81	45.918
ENSCPOG00000003088	SEPT1	92	41.860	ENSCPOG00000009037	SEPT11	76	41.108
ENSCPOG00000003088	SEPT1	91	41.765	ENSCPOG00000011596	SEPT12	91	41.765
ENSCPOG00000003088	SEPT1	94	54.335	ENSCPOG00000013687	-	89	54.335
ENSCPOG00000003088	SEPT1	73	49.446	ENSCPOG00000034399	-	75	49.446
ENSCPOG00000003088	SEPT1	80	42.230	ENSCPOG00000009996	SEPT14	80	42.230
ENSCPOG00000003088	SEPT1	80	44.257	ENSCPOG00000012711	SEPT9	86	44.369
ENSCPOG00000003088	SEPT1	96	63.687	ENSCPOG00000003438	SEPT4	99	62.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003088	SEPT1	100	91.599	ENSG00000180096	SEPT1	89	91.935	Homo_sapiens
ENSCPOG00000003088	SEPT1	99	90.515	ENSAMEG00000007865	SEPT1	100	90.515	Ailuropoda_melanoleuca
ENSCPOG00000003088	SEPT1	99	91.281	ENSANAG00000029084	SEPT1	99	91.281	Aotus_nancymaae
ENSCPOG00000003088	SEPT1	99	92.916	ENSBTAG00000021219	SEPT1	99	92.916	Bos_taurus
ENSCPOG00000003088	SEPT1	99	91.008	ENSCJAG00000002577	SEPT1	88	91.008	Callithrix_jacchus
ENSCPOG00000003088	SEPT1	99	92.663	ENSCAFG00000016576	SEPT1	100	92.663	Canis_familiaris
ENSCPOG00000003088	SEPT1	99	92.663	ENSCAFG00020017813	SEPT1	99	92.663	Canis_lupus_dingo
ENSCPOG00000003088	SEPT1	99	90.133	ENSCHIG00000017447	SEPT1	99	90.133	Capra_hircus
ENSCPOG00000003088	SEPT1	99	91.553	ENSTSYG00000035596	SEPT1	99	91.553	Carlito_syrichta
ENSCPOG00000003088	SEPT1	99	80.109	ENSCAPG00000001347	SEPT1	99	80.109	Cavia_aperea
ENSCPOG00000003088	SEPT1	99	78.202	ENSCCAG00000030164	SEPT1	90	78.202	Cebus_capucinus
ENSCPOG00000003088	SEPT1	100	91.599	ENSCATG00000037250	SEPT1	98	92.098	Cercocebus_atys
ENSCPOG00000003088	SEPT1	100	95.664	ENSCLAG00000010486	SEPT1	100	95.664	Chinchilla_lanigera
ENSCPOG00000003088	SEPT1	100	91.599	ENSCSAG00000006056	SEPT1	98	92.098	Chlorocebus_sabaeus
ENSCPOG00000003088	SEPT1	100	91.870	ENSCANG00000035786	SEPT1	89	91.870	Colobus_angolensis_palliatus
ENSCPOG00000003088	SEPT1	99	91.826	ENSCGRG00001003374	Sept1	99	91.826	Cricetulus_griseus_chok1gshd
ENSCPOG00000003088	SEPT1	99	91.008	ENSCGRG00000004919	Sept1	99	91.008	Cricetulus_griseus_crigri
ENSCPOG00000003088	SEPT1	99	91.826	ENSDNOG00000014680	SEPT1	85	91.826	Dasypus_novemcinctus
ENSCPOG00000003088	SEPT1	99	92.098	ENSDORG00000011443	Sept1	99	92.098	Dipodomys_ordii
ENSCPOG00000003088	SEPT1	92	92.059	ENSEASG00005013153	SEPT1	100	92.059	Equus_asinus_asinus
ENSCPOG00000003088	SEPT1	99	92.098	ENSECAG00000009390	SEPT1	96	92.098	Equus_caballus
ENSCPOG00000003088	SEPT1	99	90.736	ENSEEUG00000007661	SEPT1	99	90.736	Erinaceus_europaeus
ENSCPOG00000003088	SEPT1	99	91.826	ENSFCAG00000013541	SEPT1	93	91.826	Felis_catus
ENSCPOG00000003088	SEPT1	100	71.543	ENSGGOG00000017024	SEPT1	88	71.925	Gorilla_gorilla
ENSCPOG00000003088	SEPT1	99	93.460	ENSSTOG00000002782	SEPT1	100	93.529	Ictidomys_tridecemlineatus
ENSCPOG00000003088	SEPT1	99	91.304	ENSJJAG00000023131	Sept1	99	91.281	Jaculus_jaculus
ENSCPOG00000003088	SEPT1	99	92.120	ENSLAFG00000027789	SEPT1	100	92.120	Loxodonta_africana
ENSCPOG00000003088	SEPT1	100	91.599	ENSMFAG00000031504	SEPT1	89	91.599	Macaca_fascicularis
ENSCPOG00000003088	SEPT1	100	85.637	ENSMMUG00000021842	SEPT1	98	91.789	Macaca_mulatta
ENSCPOG00000003088	SEPT1	100	81.351	ENSMNEG00000041695	SEPT1	89	81.793	Macaca_nemestrina
ENSCPOG00000003088	SEPT1	100	83.198	ENSMLEG00000039481	SEPT1	88	83.198	Mandrillus_leucophaeus
ENSCPOG00000003088	SEPT1	99	92.643	ENSMAUG00000009531	Sept1	99	92.643	Mesocricetus_auratus
ENSCPOG00000003088	SEPT1	99	93.207	ENSMICG00000011817	SEPT1	95	93.207	Microcebus_murinus
ENSCPOG00000003088	SEPT1	99	92.329	ENSMOCG00000017518	Sept1	99	92.329	Microtus_ochrogaster
ENSCPOG00000003088	SEPT1	99	91.281	MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	Mus_caroli
ENSCPOG00000003088	SEPT1	99	92.329	ENSMUSG00000000486	Sept1	100	94.483	Mus_musculus
ENSCPOG00000003088	SEPT1	99	91.281	MGP_PahariEiJ_G0013702	Sept1	100	93.793	Mus_pahari
ENSCPOG00000003088	SEPT1	99	92.055	MGP_SPRETEiJ_G0031606	Sept1	100	93.793	Mus_spretus
ENSCPOG00000003088	SEPT1	99	91.304	ENSMLUG00000006749	SEPT1	100	91.304	Myotis_lucifugus
ENSCPOG00000003088	SEPT1	99	92.098	ENSNGAG00000021368	Sept1	99	92.098	Nannospalax_galili
ENSCPOG00000003088	SEPT1	99	87.123	ENSMEUG00000000492	SEPT1	99	87.123	Notamacropus_eugenii
ENSCPOG00000003088	SEPT1	99	91.008	ENSOPRG00000007981	SEPT1	99	91.008	Ochotona_princeps
ENSCPOG00000003088	SEPT1	99	95.368	ENSODEG00000014531	SEPT1	99	95.368	Octodon_degus
ENSCPOG00000003088	SEPT1	99	84.741	ENSOANG00000005331	SEPT1	99	84.741	Ornithorhynchus_anatinus
ENSCPOG00000003088	SEPT1	99	94.022	ENSOGAG00000013350	SEPT1	100	94.022	Otolemur_garnettii
ENSCPOG00000003088	SEPT1	99	92.162	ENSOARG00000006135	SEPT1	100	92.162	Ovis_aries
ENSCPOG00000003088	SEPT1	100	73.713	ENSPPAG00000032680	SEPT1	87	73.713	Pan_paniscus
ENSCPOG00000003088	SEPT1	99	91.826	ENSPPRG00000008648	-	100	91.826	Panthera_pardus
ENSCPOG00000003088	SEPT1	83	91.558	ENSPTIG00000006718	SEPT1	86	91.558	Panthera_tigris_altaica
ENSCPOG00000003088	SEPT1	100	91.599	ENSPTRG00000007998	SEPT1	88	92.098	Pan_troglodytes
ENSCPOG00000003088	SEPT1	100	83.198	ENSPANG00000032364	SEPT1	99	83.198	Papio_anubis
ENSCPOG00000003088	SEPT1	99	92.120	ENSPEMG00000023616	Sept1	99	92.098	Peromyscus_maniculatus_bairdii
ENSCPOG00000003088	SEPT1	99	87.397	ENSPCIG00000001537	SEPT1	99	87.397	Phascolarctos_cinereus
ENSCPOG00000003088	SEPT1	84	91.586	ENSPPYG00000007270	-	99	91.558	Pongo_abelii
ENSCPOG00000003088	SEPT1	99	90.191	ENSPCAG00000009042	SEPT1	99	90.191	Procavia_capensis
ENSCPOG00000003088	SEPT1	99	93.188	ENSPCOG00000028121	SEPT1	90	93.188	Propithecus_coquereli
ENSCPOG00000003088	SEPT1	99	92.916	ENSPVAG00000008655	SEPT1	99	92.916	Pteropus_vampyrus
ENSCPOG00000003088	SEPT1	99	91.781	ENSRNOG00000017804	Sept1	99	91.781	Rattus_norvegicus
ENSCPOG00000003088	SEPT1	100	91.599	ENSRBIG00000036580	SEPT1	89	91.599	Rhinopithecus_bieti
ENSCPOG00000003088	SEPT1	100	91.599	ENSRROG00000038708	SEPT1	98	92.098	Rhinopithecus_roxellana
ENSCPOG00000003088	SEPT1	99	90.736	ENSSBOG00000021733	SEPT1	88	90.736	Saimiri_boliviensis_boliviensis
ENSCPOG00000003088	SEPT1	99	87.193	ENSSHAG00000006478	SEPT1	99	87.193	Sarcophilus_harrisii
ENSCPOG00000003088	SEPT1	95	92.837	ENSSSCG00000007800	SEPT1	99	92.098	Sus_scrofa
ENSCPOG00000003088	SEPT1	99	92.643	ENSTTRG00000017272	SEPT1	99	92.643	Tursiops_truncatus
ENSCPOG00000003088	SEPT1	99	92.643	ENSUAMG00000027438	SEPT1	99	92.643	Ursus_americanus
ENSCPOG00000003088	SEPT1	99	92.663	ENSUMAG00000011345	SEPT1	99	92.643	Ursus_maritimus
ENSCPOG00000003088	SEPT1	91	92.285	ENSVVUG00000026116	SEPT1	90	92.285	Vulpes_vulpes