EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003278 (Gene tree)
Gene ID: 100730016
Gene Symbol: DDX23
Alias: PRPF28|SNRNP100|U5-100K|prp28
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 12900 bases
Position: chrDS562864.1:50701177-50714076
Accession: 100730016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000002963	DEAD	PF00270.29	1.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003321	DDX23-201	3265	XM_003475821	ENSCPOP00000002963	819 (aa)	XP_003475869	H0V0H4

Gene Model

Click here to download ENSCPOG00000003278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003278	DDX23	53	37.528	ENSCPOG00000020978	-	64	37.528
ENSCPOG00000003278	DDX23	50	30.900	ENSCPOG00000011183	-	92	30.900
ENSCPOG00000003278	DDX23	53	37.838	ENSCPOG00000013557	-	63	37.838
ENSCPOG00000003278	DDX23	51	30.072	ENSCPOG00000008615	DDX39A	90	30.072
ENSCPOG00000003278	DDX23	53	30.667	ENSCPOG00000001232	DDX52	70	30.667
ENSCPOG00000003278	DDX23	55	38.784	ENSCPOG00000003991	-	68	38.784
ENSCPOG00000003278	DDX23	54	38.462	ENSCPOG00000008770	DDX41	75	37.400
ENSCPOG00000003278	DDX23	55	37.288	ENSCPOG00000013960	-	67	37.131
ENSCPOG00000003278	DDX23	51	37.529	ENSCPOG00000007133	DDX5	65	37.529
ENSCPOG00000003278	DDX23	52	35.335	ENSCPOG00000008420	DDX59	63	35.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003278	DDX23	100	99.146	ENSG00000174243	DDX23	100	99.146	Homo_sapiens
ENSCPOG00000003278	DDX23	100	84.204	ENSAPOG00000003760	ddx23	100	84.606	Acanthochromis_polyacanthus
ENSCPOG00000003278	DDX23	100	99.024	ENSAMEG00000007123	DDX23	100	99.024	Ailuropoda_melanoleuca
ENSCPOG00000003278	DDX23	81	92.879	ENSACIG00000000022	ddx23	100	81.463	Amphilophus_citrinellus
ENSCPOG00000003278	DDX23	100	84.204	ENSAOCG00000017348	ddx23	100	84.606	Amphiprion_ocellaris
ENSCPOG00000003278	DDX23	100	84.653	ENSAPEG00000016857	ddx23	100	83.879	Amphiprion_percula
ENSCPOG00000003278	DDX23	100	84.933	ENSATEG00000016800	ddx23	100	84.970	Anabas_testudineus
ENSCPOG00000003278	DDX23	99	81.566	ENSAPLG00000002868	DDX23	99	82.530	Anas_platyrhynchos
ENSCPOG00000003278	DDX23	100	93.057	ENSACAG00000025589	DDX23	96	93.179	Anolis_carolinensis
ENSCPOG00000003278	DDX23	100	99.390	ENSANAG00000018663	DDX23	100	99.390	Aotus_nancymaae
ENSCPOG00000003278	DDX23	92	87.915	ENSAMXG00000017597	ddx23	100	85.140	Astyanax_mexicanus
ENSCPOG00000003278	DDX23	100	98.780	ENSBTAG00000021810	DDX23	100	98.780	Bos_taurus
ENSCPOG00000003278	DDX23	71	67.642	WBGene00017162	ddx-23	79	67.642	Caenorhabditis_elegans
ENSCPOG00000003278	DDX23	100	99.268	ENSCJAG00000020775	DDX23	100	99.268	Callithrix_jacchus
ENSCPOG00000003278	DDX23	100	99.268	ENSCAFG00000025422	DDX23	100	99.268	Canis_familiaris
ENSCPOG00000003278	DDX23	100	99.268	ENSCAFG00020013383	DDX23	100	99.268	Canis_lupus_dingo
ENSCPOG00000003278	DDX23	100	98.659	ENSCHIG00000018783	DDX23	100	98.659	Capra_hircus
ENSCPOG00000003278	DDX23	100	98.780	ENSTSYG00000005429	DDX23	100	98.780	Carlito_syrichta
ENSCPOG00000003278	DDX23	89	100.000	ENSCCAG00000029177	DDX23	100	100.000	Cebus_capucinus
ENSCPOG00000003278	DDX23	100	99.024	ENSCATG00000039797	DDX23	100	99.024	Cercocebus_atys
ENSCPOG00000003278	DDX23	100	82.805	ENSCATG00000032335	-	100	82.439	Cercocebus_atys
ENSCPOG00000003278	DDX23	100	99.512	ENSCLAG00000002986	DDX23	100	99.512	Chinchilla_lanigera
ENSCPOG00000003278	DDX23	100	99.024	ENSCSAG00000006240	DDX23	100	99.024	Chlorocebus_sabaeus
ENSCPOG00000003278	DDX23	84	98.837	ENSCHOG00000009027	DDX23	100	98.837	Choloepus_hoffmanni
ENSCPOG00000003278	DDX23	100	92.457	ENSCPBG00000019988	DDX23	100	92.092	Chrysemys_picta_bellii
ENSCPOG00000003278	DDX23	93	69.804	ENSCING00000001913	-	97	69.892	Ciona_intestinalis
ENSCPOG00000003278	DDX23	83	67.496	ENSCSAVG00000004158	-	100	67.496	Ciona_savignyi
ENSCPOG00000003278	DDX23	100	79.172	ENSCANG00000042510	-	100	77.832	Colobus_angolensis_palliatus
ENSCPOG00000003278	DDX23	87	99.439	ENSCANG00000040182	DDX23	100	99.439	Colobus_angolensis_palliatus
ENSCPOG00000003278	DDX23	100	98.780	ENSCGRG00001015090	Ddx23	100	98.780	Cricetulus_griseus_chok1gshd
ENSCPOG00000003278	DDX23	100	98.780	ENSCGRG00000016314	Ddx23	100	98.780	Cricetulus_griseus_crigri
ENSCPOG00000003278	DDX23	83	91.202	ENSCSEG00000020970	ddx23	92	87.332	Cynoglossus_semilaevis
ENSCPOG00000003278	DDX23	100	85.194	ENSCVAG00000015745	ddx23	100	84.848	Cyprinodon_variegatus
ENSCPOG00000003278	DDX23	83	92.070	ENSDARG00000021945	ddx23	92	88.005	Danio_rerio
ENSCPOG00000003278	DDX23	100	99.146	ENSDNOG00000043176	DDX23	100	99.146	Dasypus_novemcinctus
ENSCPOG00000003278	DDX23	100	99.146	ENSDORG00000012659	Ddx23	100	99.146	Dipodomys_ordii
ENSCPOG00000003278	DDX23	85	70.381	FBgn0032690	CG10333	85	71.019	Drosophila_melanogaster
ENSCPOG00000003278	DDX23	90	95.007	ENSETEG00000015816	DDX23	91	94.189	Echinops_telfairi
ENSCPOG00000003278	DDX23	87	78.511	ENSEBUG00000003319	ddx23	93	82.727	Eptatretus_burgeri
ENSCPOG00000003278	DDX23	100	99.024	ENSEASG00005000455	DDX23	100	99.024	Equus_asinus_asinus
ENSCPOG00000003278	DDX23	100	99.146	ENSECAG00000016681	DDX23	100	99.146	Equus_caballus
ENSCPOG00000003278	DDX23	100	90.389	ENSEEUG00000009658	DDX23	100	90.389	Erinaceus_europaeus
ENSCPOG00000003278	DDX23	100	82.788	ENSELUG00000015358	ddx23	96	86.370	Esox_lucius
ENSCPOG00000003278	DDX23	100	99.390	ENSFCAG00000000082	DDX23	100	99.390	Felis_catus
ENSCPOG00000003278	DDX23	100	91.484	ENSFALG00000000133	DDX23	100	90.146	Ficedula_albicollis
ENSCPOG00000003278	DDX23	100	99.512	ENSFDAG00000017059	DDX23	100	99.512	Fukomys_damarensis
ENSCPOG00000003278	DDX23	100	83.577	ENSFHEG00000017499	ddx23	90	91.818	Fundulus_heteroclitus
ENSCPOG00000003278	DDX23	95	84.184	ENSGMOG00000009592	ddx23	93	86.179	Gadus_morhua
ENSCPOG00000003278	DDX23	100	94.641	ENSGALG00000032307	DDX23	100	92.083	Gallus_gallus
ENSCPOG00000003278	DDX23	95	85.860	ENSGAFG00000012366	ddx23	92	88.740	Gambusia_affinis
ENSCPOG00000003278	DDX23	93	86.536	ENSGACG00000003024	ddx23	99	92.114	Gasterosteus_aculeatus
ENSCPOG00000003278	DDX23	100	92.336	ENSGAGG00000007790	DDX23	100	91.849	Gopherus_agassizii
ENSCPOG00000003278	DDX23	100	99.146	ENSGGOG00000015252	DDX23	100	100.000	Gorilla_gorilla
ENSCPOG00000003278	DDX23	100	84.287	ENSHBUG00000011876	ddx23	100	84.970	Haplochromis_burtoni
ENSCPOG00000003278	DDX23	100	99.389	ENSHGLG00000004292	DDX23	100	99.389	Heterocephalus_glaber_female
ENSCPOG00000003278	DDX23	100	99.389	ENSHGLG00100017585	DDX23	100	99.389	Heterocephalus_glaber_male
ENSCPOG00000003278	DDX23	86	90.510	ENSHCOG00000019338	ddx23	93	89.128	Hippocampus_comes
ENSCPOG00000003278	DDX23	92	87.118	ENSIPUG00000005247	DDX23	100	84.364	Ictalurus_punctatus
ENSCPOG00000003278	DDX23	100	99.390	ENSSTOG00000004219	DDX23	100	99.390	Ictidomys_tridecemlineatus
ENSCPOG00000003278	DDX23	100	98.780	ENSJJAG00000018994	Ddx23	100	98.780	Jaculus_jaculus
ENSCPOG00000003278	DDX23	100	82.974	ENSKMAG00000012060	ddx23	100	84.102	Kryptolebias_marmoratus
ENSCPOG00000003278	DDX23	93	87.370	ENSLBEG00000019475	ddx23	100	82.930	Labrus_bergylta
ENSCPOG00000003278	DDX23	92	92.667	ENSLACG00000016977	DDX23	99	92.973	Latimeria_chalumnae
ENSCPOG00000003278	DDX23	88	89.821	ENSLOCG00000007385	ddx23	100	86.236	Lepisosteus_oculatus
ENSCPOG00000003278	DDX23	100	98.902	ENSLAFG00000014227	DDX23	100	98.902	Loxodonta_africana
ENSCPOG00000003278	DDX23	100	99.024	ENSMFAG00000038666	DDX23	100	99.024	Macaca_fascicularis
ENSCPOG00000003278	DDX23	100	99.024	ENSMMUG00000008432	DDX23	100	100.000	Macaca_mulatta
ENSCPOG00000003278	DDX23	100	98.780	ENSMNEG00000040016	DDX23	100	98.780	Macaca_nemestrina
ENSCPOG00000003278	DDX23	100	82.317	ENSMNEG00000045260	-	100	81.951	Macaca_nemestrina
ENSCPOG00000003278	DDX23	100	80.366	ENSMLEG00000035096	-	100	79.146	Mandrillus_leucophaeus
ENSCPOG00000003278	DDX23	100	99.024	ENSMLEG00000042846	DDX23	100	99.024	Mandrillus_leucophaeus
ENSCPOG00000003278	DDX23	100	84.345	ENSMAMG00000024144	ddx23	100	84.606	Mastacembelus_armatus
ENSCPOG00000003278	DDX23	100	84.287	ENSMZEG00005026086	ddx23	100	84.970	Maylandia_zebra
ENSCPOG00000003278	DDX23	100	98.901	ENSMAUG00000012336	Ddx23	100	98.901	Mesocricetus_auratus
ENSCPOG00000003278	DDX23	100	98.902	ENSMICG00000017541	DDX23	100	98.902	Microcebus_murinus
ENSCPOG00000003278	DDX23	100	98.293	ENSMOCG00000018987	Ddx23	100	98.293	Microtus_ochrogaster
ENSCPOG00000003278	DDX23	100	79.243	ENSMMOG00000012406	ddx23	100	79.146	Mola_mola
ENSCPOG00000003278	DDX23	100	97.927	ENSMODG00000009975	DDX23	100	97.927	Monodelphis_domestica
ENSCPOG00000003278	DDX23	100	83.820	ENSMALG00000022366	ddx23	100	83.961	Monopterus_albus
ENSCPOG00000003278	DDX23	100	97.927	MGP_CAROLIEiJ_G0020240	Ddx23	100	97.927	Mus_caroli
ENSCPOG00000003278	DDX23	100	98.049	ENSMUSG00000003360	Ddx23	100	98.049	Mus_musculus
ENSCPOG00000003278	DDX23	100	97.927	MGP_PahariEiJ_G0020243	Ddx23	100	97.927	Mus_pahari
ENSCPOG00000003278	DDX23	100	98.049	MGP_SPRETEiJ_G0021137	Ddx23	100	98.049	Mus_spretus
ENSCPOG00000003278	DDX23	100	99.146	ENSMPUG00000014739	DDX23	100	99.146	Mustela_putorius_furo
ENSCPOG00000003278	DDX23	100	94.268	ENSMLUG00000003683	-	100	93.537	Myotis_lucifugus
ENSCPOG00000003278	DDX23	100	98.659	ENSMLUG00000011033	-	100	98.659	Myotis_lucifugus
ENSCPOG00000003278	DDX23	100	98.537	ENSNGAG00000019018	Ddx23	100	98.537	Nannospalax_galili
ENSCPOG00000003278	DDX23	83	92.826	ENSNBRG00000022928	ddx23	100	82.298	Neolamprologus_brichardi
ENSCPOG00000003278	DDX23	100	92.073	ENSNLEG00000017864	DDX23	100	91.707	Nomascus_leucogenys
ENSCPOG00000003278	DDX23	100	97.805	ENSMEUG00000009477	DDX23	100	97.805	Notamacropus_eugenii
ENSCPOG00000003278	DDX23	100	98.537	ENSOPRG00000007170	-	100	98.537	Ochotona_princeps
ENSCPOG00000003278	DDX23	100	99.389	ENSODEG00000003592	DDX23	100	99.389	Octodon_degus
ENSCPOG00000003278	DDX23	100	84.287	ENSONIG00000017048	ddx23	100	84.988	Oreochromis_niloticus
ENSCPOG00000003278	DDX23	100	98.415	ENSOCUG00000001414	DDX23	100	98.415	Oryctolagus_cuniculus
ENSCPOG00000003278	DDX23	100	81.929	ENSORLG00000012330	ddx23	100	82.195	Oryzias_latipes
ENSCPOG00000003278	DDX23	100	82.051	ENSORLG00020017586	ddx23	100	82.317	Oryzias_latipes_hni
ENSCPOG00000003278	DDX23	81	91.528	ENSORLG00015012361	ddx23	88	91.667	Oryzias_latipes_hsok
ENSCPOG00000003278	DDX23	100	83.894	ENSOMEG00000006453	ddx23	92	88.514	Oryzias_melastigma
ENSCPOG00000003278	DDX23	100	99.268	ENSOGAG00000016813	DDX23	100	99.268	Otolemur_garnettii
ENSCPOG00000003278	DDX23	100	98.659	ENSOARG00000019105	DDX23	90	98.659	Ovis_aries
ENSCPOG00000003278	DDX23	100	71.463	ENSPPAG00000038775	-	100	70.000	Pan_paniscus
ENSCPOG00000003278	DDX23	100	99.146	ENSPPAG00000037807	DDX23	100	100.000	Pan_paniscus
ENSCPOG00000003278	DDX23	100	99.390	ENSPPRG00000015345	DDX23	100	99.390	Panthera_pardus
ENSCPOG00000003278	DDX23	100	99.390	ENSPTIG00000018873	DDX23	100	99.390	Panthera_tigris_altaica
ENSCPOG00000003278	DDX23	100	99.024	ENSPTRG00000004887	DDX23	100	100.000	Pan_troglodytes
ENSCPOG00000003278	DDX23	100	75.366	ENSPTRG00000051972	-	100	73.447	Pan_troglodytes
ENSCPOG00000003278	DDX23	93	86.038	ENSPANG00000035074	-	100	86.038	Papio_anubis
ENSCPOG00000003278	DDX23	100	99.024	ENSPANG00000019459	DDX23	92	99.024	Papio_anubis
ENSCPOG00000003278	DDX23	89	89.041	ENSPKIG00000024110	ddx23	100	85.145	Paramormyrops_kingsleyae
ENSCPOG00000003278	DDX23	100	80.779	ENSPSIG00000002834	DDX23	100	80.900	Pelodiscus_sinensis
ENSCPOG00000003278	DDX23	100	80.342	ENSPMGG00000010243	ddx23	100	81.045	Periophthalmus_magnuspinnatus
ENSCPOG00000003278	DDX23	100	98.537	ENSPEMG00000011305	Ddx23	100	98.537	Peromyscus_maniculatus_bairdii
ENSCPOG00000003278	DDX23	83	84.919	ENSPMAG00000008625	ddx23	99	81.074	Petromyzon_marinus
ENSCPOG00000003278	DDX23	100	97.683	ENSPCIG00000027691	DDX23	100	97.683	Phascolarctos_cinereus
ENSCPOG00000003278	DDX23	95	85.328	ENSPFOG00000012159	ddx23	92	89.262	Poecilia_formosa
ENSCPOG00000003278	DDX23	95	86.358	ENSPLAG00000005052	ddx23	92	89.262	Poecilia_latipinna
ENSCPOG00000003278	DDX23	95	86.079	ENSPMEG00000015385	ddx23	92	89.262	Poecilia_mexicana
ENSCPOG00000003278	DDX23	95	86.531	ENSPREG00000007074	ddx23	93	88.755	Poecilia_reticulata
ENSCPOG00000003278	DDX23	100	99.146	ENSPPYG00000004468	DDX23	97	99.146	Pongo_abelii
ENSCPOG00000003278	DDX23	100	94.390	ENSPCAG00000002016	DDX23	100	94.024	Procavia_capensis
ENSCPOG00000003278	DDX23	100	99.146	ENSPCOG00000025915	DDX23	100	100.000	Propithecus_coquereli
ENSCPOG00000003278	DDX23	100	99.268	ENSPVAG00000009818	DDX23	100	99.268	Pteropus_vampyrus
ENSCPOG00000003278	DDX23	100	80.586	ENSPNYG00000021038	ddx23	100	81.616	Pundamilia_nyererei
ENSCPOG00000003278	DDX23	82	90.963	ENSPNAG00000019203	ddx23	89	92.121	Pygocentrus_nattereri
ENSCPOG00000003278	DDX23	100	98.171	ENSRNOG00000060154	Ddx23	100	98.171	Rattus_norvegicus
ENSCPOG00000003278	DDX23	100	85.958	ENSRBIG00000040362	DDX23	100	85.836	Rhinopithecus_bieti
ENSCPOG00000003278	DDX23	100	80.366	ENSRBIG00000036337	-	100	78.902	Rhinopithecus_bieti
ENSCPOG00000003278	DDX23	100	77.683	ENSRROG00000045747	-	96	82.249	Rhinopithecus_roxellana
ENSCPOG00000003278	DDX23	100	99.146	ENSRROG00000028964	DDX23	100	99.146	Rhinopithecus_roxellana
ENSCPOG00000003278	DDX23	70	37.245	YDR243C	-	81	38.848	Saccharomyces_cerevisiae
ENSCPOG00000003278	DDX23	100	99.268	ENSSBOG00000025799	DDX23	100	99.268	Saimiri_boliviensis_boliviensis
ENSCPOG00000003278	DDX23	100	97.805	ENSSHAG00000006590	DDX23	100	97.805	Sarcophilus_harrisii
ENSCPOG00000003278	DDX23	88	89.793	ENSSFOG00015013273	ddx23	100	86.010	Scleropages_formosus
ENSCPOG00000003278	DDX23	100	82.968	ENSSMAG00000000529	ddx23	93	87.067	Scophthalmus_maximus
ENSCPOG00000003278	DDX23	100	84.185	ENSSDUG00000022459	ddx23	100	84.867	Seriola_dumerili
ENSCPOG00000003278	DDX23	100	84.185	ENSSLDG00000010453	ddx23	100	84.746	Seriola_lalandi_dorsalis
ENSCPOG00000003278	DDX23	93	100.000	ENSSARG00000004534	DDX23	93	100.000	Sorex_araneus
ENSCPOG00000003278	DDX23	100	94.775	ENSSPUG00000016044	DDX23	100	93.066	Sphenodon_punctatus
ENSCPOG00000003278	DDX23	83	92.522	ENSSPAG00000016482	ddx23	100	84.364	Stegastes_partitus
ENSCPOG00000003278	DDX23	100	98.902	ENSSSCG00000000176	DDX23	100	98.902	Sus_scrofa
ENSCPOG00000003278	DDX23	95	76.319	ENSTRUG00000000455	ddx23	92	87.330	Takifugu_rubripes
ENSCPOG00000003278	DDX23	100	94.756	ENSTBEG00000016909	DDX23	100	94.390	Tupaia_belangeri
ENSCPOG00000003278	DDX23	100	92.683	ENSTTRG00000004604	DDX23	100	92.683	Tursiops_truncatus
ENSCPOG00000003278	DDX23	100	99.146	ENSUAMG00000027082	DDX23	100	99.146	Ursus_americanus
ENSCPOG00000003278	DDX23	100	99.146	ENSUMAG00000006538	DDX23	100	99.146	Ursus_maritimus
ENSCPOG00000003278	DDX23	100	99.268	ENSVVUG00000019648	DDX23	100	99.268	Vulpes_vulpes
ENSCPOG00000003278	DDX23	100	85.348	ENSXETG00000009807	ddx23	100	84.737	Xenopus_tropicalis
ENSCPOG00000003278	DDX23	95	83.887	ENSXCOG00000011648	ddx23	92	86.945	Xiphophorus_couchianus
ENSCPOG00000003278	DDX23	95	86.242	ENSXMAG00000017387	ddx23	92	89.008	Xiphophorus_maculatus