EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003376 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6802 bases
Position: chrDS562887.1:494847-501648
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003051	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003419	-	1013	-	ENSCPOP00000003051	309 (aa)	-	H0V0Q7

Gene Model

Click here to download ENSCPOG00000003376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003376	-	70	44.954	ENSCPOG00000021304	GIMAP1	71	44.954
ENSCPOG00000003376	-	66	45.588	ENSCPOG00000040378	-	66	45.588
ENSCPOG00000003376	-	64	42.132	ENSCPOG00000005108	-	88	35.433
ENSCPOG00000003376	-	84	36.882	ENSCPOG00000037321	GIMAP4	79	36.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003376	-	94	61.301	ENSG00000196329	GIMAP5	98	59.801	Homo_sapiens
ENSCPOG00000003376	-	94	61.301	ENSG00000281887	GIMAP1-GIMAP5	80	59.801	Homo_sapiens
ENSCPOG00000003376	-	74	43.043	ENSAPLG00000001066	-	93	43.043	Anas_platyrhynchos
ENSCPOG00000003376	-	64	47.475	ENSACAG00000028535	-	73	47.475	Anolis_carolinensis
ENSCPOG00000003376	-	60	45.161	ENSACAG00000017193	-	83	45.161	Anolis_carolinensis
ENSCPOG00000003376	-	61	48.485	ENSACAG00000016727	-	71	48.485	Anolis_carolinensis
ENSCPOG00000003376	-	57	50.568	ENSACAG00000016862	-	86	50.568	Anolis_carolinensis
ENSCPOG00000003376	-	94	58.703	ENSBTAG00000000715	-	94	58.278	Bos_taurus
ENSCPOG00000003376	-	94	58.219	ENSBTAG00000039588	-	98	58.219	Bos_taurus
ENSCPOG00000003376	-	92	61.484	ENSBTAG00000004894	-	100	59.740	Bos_taurus
ENSCPOG00000003376	-	94	60.959	ENSCJAG00000020126	-	100	59.804	Callithrix_jacchus
ENSCPOG00000003376	-	99	63.312	ENSCAFG00000024817	-	90	63.312	Canis_familiaris
ENSCPOG00000003376	-	99	60.065	ENSCAFG00020006487	-	99	60.065	Canis_lupus_dingo
ENSCPOG00000003376	-	86	62.642	ENSCHIG00000020434	-	96	61.268	Capra_hircus
ENSCPOG00000003376	-	94	60.000	ENSCHIG00000000607	-	97	60.000	Capra_hircus
ENSCPOG00000003376	-	92	60.071	ENSCHIG00000000431	-	97	59.136	Capra_hircus
ENSCPOG00000003376	-	94	58.219	ENSCHIG00000013093	-	98	58.219	Capra_hircus
ENSCPOG00000003376	-	97	66.890	ENSTSYG00000010016	-	100	66.890	Carlito_syrichta
ENSCPOG00000003376	-	100	99.029	ENSCAPG00000007631	-	100	99.029	Cavia_aperea
ENSCPOG00000003376	-	94	63.699	ENSCCAG00000009203	-	98	62.791	Cebus_capucinus
ENSCPOG00000003376	-	94	77.320	ENSCLAG00000001322	-	94	75.908	Chinchilla_lanigera
ENSCPOG00000003376	-	100	84.466	ENSCLAG00000001246	-	100	84.466	Chinchilla_lanigera
ENSCPOG00000003376	-	94	64.384	ENSCSAG00000006865	-	93	63.123	Chlorocebus_sabaeus
ENSCPOG00000003376	-	63	47.959	ENSCPBG00000005548	-	67	47.959	Chrysemys_picta_bellii
ENSCPOG00000003376	-	94	63.014	ENSCANG00000029802	-	98	61.794	Colobus_angolensis_palliatus
ENSCPOG00000003376	-	99	60.261	ENSCGRG00001024196	-	99	60.261	Cricetulus_griseus_chok1gshd
ENSCPOG00000003376	-	96	59.000	ENSCGRG00001024272	-	99	59.000	Cricetulus_griseus_chok1gshd
ENSCPOG00000003376	-	99	60.261	ENSCGRG00000015177	-	99	60.261	Cricetulus_griseus_crigri
ENSCPOG00000003376	-	96	59.333	ENSCGRG00000014686	-	99	59.333	Cricetulus_griseus_crigri
ENSCPOG00000003376	-	99	65.584	ENSECAG00000029716	-	98	65.584	Equus_caballus
ENSCPOG00000003376	-	99	65.584	ENSECAG00000007663	-	99	65.584	Equus_caballus
ENSCPOG00000003376	-	94	65.068	ENSECAG00000007668	-	98	64.452	Equus_caballus
ENSCPOG00000003376	-	90	61.871	ENSEEUG00000006852	-	99	61.871	Erinaceus_europaeus
ENSCPOG00000003376	-	99	61.967	ENSFCAG00000042622	-	99	61.967	Felis_catus
ENSCPOG00000003376	-	60	48.649	ENSGAGG00000015829	-	87	48.649	Gopherus_agassizii
ENSCPOG00000003376	-	60	44.385	ENSGAGG00000015825	-	66	44.385	Gopherus_agassizii
ENSCPOG00000003376	-	94	61.644	ENSGGOG00000014216	-	98	60.133	Gorilla_gorilla
ENSCPOG00000003376	-	100	62.783	ENSSTOG00000021076	-	100	62.783	Ictidomys_tridecemlineatus
ENSCPOG00000003376	-	63	36.686	ENSKMAG00000007013	-	71	36.842	Kryptolebias_marmoratus
ENSCPOG00000003376	-	95	62.925	ENSMFAG00000044951	-	93	62.126	Macaca_fascicularis
ENSCPOG00000003376	-	94	62.671	ENSMMUG00000001270	-	84	61.462	Macaca_mulatta
ENSCPOG00000003376	-	94	63.014	ENSMNEG00000028821	-	98	61.794	Macaca_nemestrina
ENSCPOG00000003376	-	94	63.699	ENSMLEG00000029622	-	98	62.458	Mandrillus_leucophaeus
ENSCPOG00000003376	-	100	65.385	ENSMICG00000027282	-	100	65.385	Microcebus_murinus
ENSCPOG00000003376	-	94	63.390	ENSMICG00000035983	-	99	62.866	Microcebus_murinus
ENSCPOG00000003376	-	73	68.444	ENSMOCG00000002213	-	100	68.444	Microtus_ochrogaster
ENSCPOG00000003376	-	93	60.764	ENSMOCG00000018608	-	97	60.764	Microtus_ochrogaster
ENSCPOG00000003376	-	91	50.000	ENSMODG00000003669	-	88	50.000	Monodelphis_domestica
ENSCPOG00000003376	-	97	57.807	MGP_CAROLIEiJ_G0028355	Gimap3	96	57.807	Mus_caroli
ENSCPOG00000003376	-	93	60.627	MGP_CAROLIEiJ_G0028354	Gimap5	100	58.900	Mus_caroli
ENSCPOG00000003376	-	85	63.636	ENSMUSG00000039264	Gimap3	98	57.807	Mus_musculus
ENSCPOG00000003376	-	93	60.976	ENSMUSG00000043505	Gimap5	100	59.223	Mus_musculus
ENSCPOG00000003376	-	96	58.224	MGP_PahariEiJ_G0022105	Gimap3	99	58.224	Mus_pahari
ENSCPOG00000003376	-	93	59.930	MGP_PahariEiJ_G0022104	Gimap5	99	58.033	Mus_pahari
ENSCPOG00000003376	-	76	41.772	ENSMLUG00000022809	-	92	41.772	Myotis_lucifugus
ENSCPOG00000003376	-	86	60.755	ENSMLUG00000023466	-	92	60.755	Myotis_lucifugus
ENSCPOG00000003376	-	66	62.319	ENSMLUG00000025954	-	98	62.319	Myotis_lucifugus
ENSCPOG00000003376	-	90	57.401	ENSMLUG00000028966	-	94	55.290	Myotis_lucifugus
ENSCPOG00000003376	-	87	56.569	ENSMLUG00000026545	-	89	56.569	Myotis_lucifugus
ENSCPOG00000003376	-	97	59.667	ENSMLUG00000007287	-	97	59.667	Myotis_lucifugus
ENSCPOG00000003376	-	100	66.667	ENSNGAG00000022013	-	100	66.667	Nannospalax_galili
ENSCPOG00000003376	-	93	63.763	ENSNGAG00000020526	-	97	63.763	Nannospalax_galili
ENSCPOG00000003376	-	94	63.014	ENSNLEG00000003844	-	98	61.462	Nomascus_leucogenys
ENSCPOG00000003376	-	88	51.471	ENSMEUG00000000849	-	100	51.471	Notamacropus_eugenii
ENSCPOG00000003376	-	88	51.838	ENSMEUG00000016596	-	100	51.838	Notamacropus_eugenii
ENSCPOG00000003376	-	92	75.789	ENSODEG00000011306	-	100	73.139	Octodon_degus
ENSCPOG00000003376	-	66	71.429	ENSOCUG00000025892	-	88	71.429	Oryctolagus_cuniculus
ENSCPOG00000003376	-	98	63.907	ENSOCUG00000005976	-	96	63.907	Oryctolagus_cuniculus
ENSCPOG00000003376	-	89	63.139	ENSOGAG00000009145	-	89	63.139	Otolemur_garnettii
ENSCPOG00000003376	-	97	60.465	ENSOARG00000001589	-	88	60.465	Ovis_aries
ENSCPOG00000003376	-	92	62.898	ENSOARG00000001288	-	97	61.794	Ovis_aries
ENSCPOG00000003376	-	74	61.224	ENSOARG00000001183	-	94	61.224	Ovis_aries
ENSCPOG00000003376	-	94	54.795	ENSOARG00000001645	-	98	54.485	Ovis_aries
ENSCPOG00000003376	-	94	61.986	ENSPPAG00000042001	-	98	60.465	Pan_paniscus
ENSCPOG00000003376	-	99	61.967	ENSPPRG00000017393	-	99	61.967	Panthera_pardus
ENSCPOG00000003376	-	99	61.967	ENSPTIG00000012405	-	99	61.967	Panthera_tigris_altaica
ENSCPOG00000003376	-	94	61.301	ENSPTRG00000034465	GIMAP1	98	59.801	Pan_troglodytes
ENSCPOG00000003376	-	94	61.301	ENSPTRG00000028356	-	82	59.801	Pan_troglodytes
ENSCPOG00000003376	-	94	63.699	ENSPANG00000030896	-	98	62.458	Papio_anubis
ENSCPOG00000003376	-	69	49.533	ENSPSIG00000013467	-	93	49.533	Pelodiscus_sinensis
ENSCPOG00000003376	-	65	50.000	ENSPSIG00000000508	-	79	50.000	Pelodiscus_sinensis
ENSCPOG00000003376	-	61	45.500	ENSPSIG00000006796	-	97	47.500	Pelodiscus_sinensis
ENSCPOG00000003376	-	80	39.271	ENSPSIG00000016016	-	74	39.271	Pelodiscus_sinensis
ENSCPOG00000003376	-	80	41.700	ENSPSIG00000000573	-	97	41.700	Pelodiscus_sinensis
ENSCPOG00000003376	-	91	62.057	ENSPEMG00000019236	-	93	62.057	Peromyscus_maniculatus_bairdii
ENSCPOG00000003376	-	95	60.410	ENSPEMG00000014554	-	100	59.223	Peromyscus_maniculatus_bairdii
ENSCPOG00000003376	-	62	47.917	ENSPCIG00000001766	-	68	47.917	Phascolarctos_cinereus
ENSCPOG00000003376	-	89	52.364	ENSPCIG00000008658	-	86	52.364	Phascolarctos_cinereus
ENSCPOG00000003376	-	94	61.986	ENSPPYG00000018173	-	91	60.465	Pongo_abelii
ENSCPOG00000003376	-	100	67.308	ENSPCOG00000016811	-	100	67.308	Propithecus_coquereli
ENSCPOG00000003376	-	93	57.639	ENSRNOG00000008416	Gimap5	99	56.678	Rattus_norvegicus
ENSCPOG00000003376	-	94	64.041	ENSRBIG00000035290	-	98	63.123	Rhinopithecus_bieti
ENSCPOG00000003376	-	94	64.041	ENSRROG00000028817	-	93	63.123	Rhinopithecus_roxellana
ENSCPOG00000003376	-	95	61.224	ENSSBOG00000032164	-	98	60.465	Saimiri_boliviensis_boliviensis
ENSCPOG00000003376	-	64	58.081	ENSSHAG00000000843	-	84	58.081	Sarcophilus_harrisii
ENSCPOG00000003376	-	92	53.873	ENSSARG00000004634	-	100	53.000	Sorex_araneus
ENSCPOG00000003376	-	57	46.591	ENSSPUG00000009917	-	54	46.629	Sphenodon_punctatus
ENSCPOG00000003376	-	96	41.060	ENSSPUG00000009848	-	98	41.060	Sphenodon_punctatus
ENSCPOG00000003376	-	66	49.268	ENSSPUG00000009760	-	93	49.268	Sphenodon_punctatus
ENSCPOG00000003376	-	66	48.293	ENSSPUG00000003272	-	51	48.544	Sphenodon_punctatus
ENSCPOG00000003376	-	79	37.551	ENSSPUG00000009907	-	92	37.551	Sphenodon_punctatus
ENSCPOG00000003376	-	69	46.948	ENSSPUG00000010046	-	73	46.948	Sphenodon_punctatus
ENSCPOG00000003376	-	89	44.364	ENSSPUG00000010036	-	87	44.364	Sphenodon_punctatus
ENSCPOG00000003376	-	64	49.239	ENSSPUG00000009833	-	76	49.239	Sphenodon_punctatus
ENSCPOG00000003376	-	64	54.315	ENSSPUG00000010063	-	68	54.315	Sphenodon_punctatus
ENSCPOG00000003376	-	53	53.374	ENSSPUG00000014119	-	75	53.374	Sphenodon_punctatus
ENSCPOG00000003376	-	94	58.904	ENSSSCG00000039407	-	98	58.140	Sus_scrofa
ENSCPOG00000003376	-	97	62.791	ENSTBEG00000000035	-	100	62.791	Tupaia_belangeri
ENSCPOG00000003376	-	94	62.887	ENSTTRG00000003204	-	99	62.887	Tursiops_truncatus
ENSCPOG00000003376	-	78	67.220	ENSTTRG00000011008	-	100	67.220	Tursiops_truncatus
ENSCPOG00000003376	-	99	62.460	ENSUMAG00000018133	-	92	64.312	Ursus_maritimus
ENSCPOG00000003376	-	94	60.544	ENSVPAG00000011693	-	99	59.736	Vicugna_pacos