EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000003544 (Gene tree)
Gene ID: -
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 148755 bases
Position: chrDS562859.1:4221814-4370568
Accession: 100731146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003204	SRRM_C	PF15230.6	9.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003588	SRRM4-201	1827	XM_003478301	ENSCPOP00000003204	608 (aa)	XP_003478349	H0V145

Gene Model

Click here to download ENSCPOG00000003544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003544	SRRM4	86	90.996	ENSG00000139767	SRRM4	85	90.996	Homo_sapiens
ENSCPOG00000003544	SRRM4	85	49.251	ENSACAG00000004139	SRRM4	88	50.278	Anolis_carolinensis
ENSCPOG00000003544	SRRM4	57	91.714	ENSANAG00000020333	SRRM4	60	84.857	Aotus_nancymaae
ENSCPOG00000003544	SRRM4	86	88.314	ENSBTAG00000008676	SRRM4	87	88.314	Bos_taurus
ENSCPOG00000003544	SRRM4	86	91.188	ENSCJAG00000009146	SRRM4	85	91.188	Callithrix_jacchus
ENSCPOG00000003544	SRRM4	85	90.577	ENSCAFG00000023113	SRRM4	86	90.613	Canis_familiaris
ENSCPOG00000003544	SRRM4	52	90.506	ENSCAFG00020018665	SRRM4	56	90.566	Canis_lupus_dingo
ENSCPOG00000003544	SRRM4	86	70.209	ENSCHIG00000019151	SRRM4	58	89.097	Capra_hircus
ENSCPOG00000003544	SRRM4	78	88.912	ENSTSYG00000012239	SRRM4	84	88.912	Carlito_syrichta
ENSCPOG00000003544	SRRM4	93	93.440	ENSCAPG00000008729	SRRM4	100	93.440	Cavia_aperea
ENSCPOG00000003544	SRRM4	86	90.613	ENSCCAG00000022479	SRRM4	86	90.613	Cebus_capucinus
ENSCPOG00000003544	SRRM4	86	90.038	ENSCATG00000036343	SRRM4	85	90.038	Cercocebus_atys
ENSCPOG00000003544	SRRM4	86	95.769	ENSCLAG00000009764	SRRM4	85	95.777	Chinchilla_lanigera
ENSCPOG00000003544	SRRM4	86	90.613	ENSCSAG00000002300	SRRM4	85	90.613	Chlorocebus_sabaeus
ENSCPOG00000003544	SRRM4	86	60.813	ENSCPBG00000012293	SRRM4	88	59.519	Chrysemys_picta_bellii
ENSCPOG00000003544	SRRM4	86	87.548	ENSCANG00000031719	SRRM4	85	87.548	Colobus_angolensis_palliatus
ENSCPOG00000003544	SRRM4	85	82.466	ENSCGRG00001000544	Srrm4	86	84.453	Cricetulus_griseus_chok1gshd
ENSCPOG00000003544	SRRM4	86	77.735	ENSCGRG00000006973	Srrm4	85	76.967	Cricetulus_griseus_crigri
ENSCPOG00000003544	SRRM4	85	88.439	ENSDNOG00000000260	SRRM4	88	88.484	Dasypus_novemcinctus
ENSCPOG00000003544	SRRM4	86	81.262	ENSDORG00000015243	Srrm4	87	81.609	Dipodomys_ordii
ENSCPOG00000003544	SRRM4	85	90.135	ENSEASG00005008759	SRRM4	87	90.230	Equus_asinus_asinus
ENSCPOG00000003544	SRRM4	85	89.942	ENSECAG00000021729	SRRM4	87	90.038	Equus_caballus
ENSCPOG00000003544	SRRM4	85	90.329	ENSFCAG00000010536	SRRM4	84	90.421	Felis_catus
ENSCPOG00000003544	SRRM4	65	58.072	ENSFALG00000007700	SRRM4	89	57.643	Ficedula_albicollis
ENSCPOG00000003544	SRRM4	85	90.944	ENSFDAG00000007218	SRRM4	85	92.720	Fukomys_damarensis
ENSCPOG00000003544	SRRM4	59	56.334	ENSGAGG00000017218	SRRM4	82	56.773	Gopherus_agassizii
ENSCPOG00000003544	SRRM4	86	91.188	ENSGGOG00000005338	SRRM4	85	91.188	Gorilla_gorilla
ENSCPOG00000003544	SRRM4	85	94.220	ENSHGLG00000007830	SRRM4	86	94.253	Heterocephalus_glaber_female
ENSCPOG00000003544	SRRM4	77	86.345	ENSHGLG00100008549	SRRM4	91	85.447	Heterocephalus_glaber_male
ENSCPOG00000003544	SRRM4	78	79.707	ENSSTOG00000026642	SRRM4	83	78.497	Ictidomys_tridecemlineatus
ENSCPOG00000003544	SRRM4	82	80.159	ENSJJAG00000016448	Srrm4	82	86.486	Jaculus_jaculus
ENSCPOG00000003544	SRRM4	85	88.224	ENSLAFG00000003731	SRRM4	85	87.739	Loxodonta_africana
ENSCPOG00000003544	SRRM4	86	90.805	ENSMFAG00000041271	SRRM4	84	90.805	Macaca_fascicularis
ENSCPOG00000003544	SRRM4	84	77.606	ENSMMUG00000021230	SRRM4	83	76.775	Macaca_mulatta
ENSCPOG00000003544	SRRM4	86	90.613	ENSMNEG00000044154	SRRM4	85	90.613	Macaca_nemestrina
ENSCPOG00000003544	SRRM4	86	90.421	ENSMLEG00000034455	SRRM4	85	90.421	Mandrillus_leucophaeus
ENSCPOG00000003544	SRRM4	85	57.895	ENSMGAG00000009082	SRRM4	87	60.187	Meleagris_gallopavo
ENSCPOG00000003544	SRRM4	85	81.888	ENSMAUG00000013203	Srrm4	86	83.877	Mesocricetus_auratus
ENSCPOG00000003544	SRRM4	86	90.996	ENSMICG00000012386	SRRM4	85	90.996	Microcebus_murinus
ENSCPOG00000003544	SRRM4	85	81.503	ENSMOCG00000006737	Srrm4	86	83.877	Microtus_ochrogaster
ENSCPOG00000003544	SRRM4	85	57.857	ENSMODG00000015283	SRRM4	50	56.881	Monodelphis_domestica
ENSCPOG00000003544	SRRM4	85	86.320	MGP_CAROLIEiJ_G0027638	Srrm4	85	85.605	Mus_caroli
ENSCPOG00000003544	SRRM4	85	85.714	ENSMUSG00000063919	Srrm4	85	85.029	Mus_musculus
ENSCPOG00000003544	SRRM4	85	84.586	MGP_PahariEiJ_G0024219	Srrm4	86	83.877	Mus_pahari
ENSCPOG00000003544	SRRM4	85	85.934	MGP_SPRETEiJ_G0028637	Srrm4	85	85.221	Mus_spretus
ENSCPOG00000003544	SRRM4	85	89.942	ENSMPUG00000002930	SRRM4	87	90.038	Mustela_putorius_furo
ENSCPOG00000003544	SRRM4	86	88.528	ENSNGAG00000020807	Srrm4	87	88.528	Nannospalax_galili
ENSCPOG00000003544	SRRM4	86	90.805	ENSNLEG00000000200	SRRM4	85	90.805	Nomascus_leucogenys
ENSCPOG00000003544	SRRM4	85	82.286	ENSOPRG00000016981	SRRM4	77	81.698	Ochotona_princeps
ENSCPOG00000003544	SRRM4	85	94.412	ENSODEG00000006291	SRRM4	85	94.434	Octodon_degus
ENSCPOG00000003544	SRRM4	85	87.452	ENSOCUG00000004503	SRRM4	77	87.572	Oryctolagus_cuniculus
ENSCPOG00000003544	SRRM4	86	91.188	ENSOGAG00000015431	SRRM4	85	91.188	Otolemur_garnettii
ENSCPOG00000003544	SRRM4	86	88.506	ENSOARG00000002063	SRRM4	87	88.506	Ovis_aries
ENSCPOG00000003544	SRRM4	78	90.566	ENSPPAG00000028134	SRRM4	84	90.566	Pan_paniscus
ENSCPOG00000003544	SRRM4	85	90.329	ENSPPRG00000002659	SRRM4	84	90.421	Panthera_pardus
ENSCPOG00000003544	SRRM4	86	91.188	ENSPTRG00000005517	SRRM4	85	91.188	Pan_troglodytes
ENSCPOG00000003544	SRRM4	86	90.421	ENSPANG00000022544	SRRM4	99	90.196	Papio_anubis
ENSCPOG00000003544	SRRM4	85	81.346	ENSPEMG00000001823	Srrm4	86	82.759	Peromyscus_maniculatus_bairdii
ENSCPOG00000003544	SRRM4	78	79.665	ENSPCAG00000016401	SRRM4	69	79.874	Procavia_capensis
ENSCPOG00000003544	SRRM4	86	91.954	ENSPCOG00000013803	SRRM4	87	91.954	Propithecus_coquereli
ENSCPOG00000003544	SRRM4	78	89.518	ENSPVAG00000017487	SRRM4	86	89.518	Pteropus_vampyrus
ENSCPOG00000003544	SRRM4	85	86.320	ENSRNOG00000001141	Srrm4	86	85.605	Rattus_norvegicus
ENSCPOG00000003544	SRRM4	55	89.941	ENSRBIG00000040107	SRRM4	61	90.028	Rhinopithecus_bieti
ENSCPOG00000003544	SRRM4	55	90.533	ENSRROG00000035868	SRRM4	62	90.598	Rhinopithecus_roxellana
ENSCPOG00000003544	SRRM4	86	83.716	ENSSBOG00000035310	SRRM4	85	83.716	Saimiri_boliviensis_boliviensis
ENSCPOG00000003544	SRRM4	78	66.197	ENSSHAG00000017330	SRRM4	88	64.329	Sarcophilus_harrisii
ENSCPOG00000003544	SRRM4	52	83.596	ENSSARG00000012647	SRRM4	56	83.596	Sorex_araneus
ENSCPOG00000003544	SRRM4	86	88.506	ENSSSCG00000009845	SRRM4	85	88.506	Sus_scrofa
ENSCPOG00000003544	SRRM4	63	57.949	ENSTGUG00000009228	SRRM4	91	57.009	Taeniopygia_guttata
ENSCPOG00000003544	SRRM4	86	56.107	ENSVPAG00000007937	SRRM4	72	88.550	Vicugna_pacos
ENSCPOG00000003544	SRRM4	62	48.223	ENSXETG00000019934	SRRM4	97	48.909	Xenopus_tropicalis