EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003565 (Gene tree)
Gene ID: 100735041
Gene Symbol: -
Alias: -
Full Name: pescadillo ribosomal biogenesis factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 13295 bases
Position: chrDS562859.1:12596273-12609567
Accession: 100735041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003221	Pescadillo_N	PF06732.11	1.6e-124	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003609	-	1773	XM_003478314	ENSCPOP00000003221	590 (aa)	XP_003478362	H0V162

Gene Model

Click here to download ENSCPOG00000003565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003565	-	99	82.432	ENSCPOG00000022594	-	99	82.432
ENSCPOG00000003565	-	100	91.864	ENSCPOG00000039303	-	100	91.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003565	-	99	89.831	ENSG00000100029	PES1	100	91.304	Homo_sapiens
ENSCPOG00000003565	-	98	71.848	ENSAPOG00000010054	pes	99	71.066	Acanthochromis_polyacanthus
ENSCPOG00000003565	-	100	88.027	ENSAMEG00000007417	PES1	100	88.423	Ailuropoda_melanoleuca
ENSCPOG00000003565	-	98	71.157	ENSACIG00000017610	pes	99	69.179	Amphilophus_citrinellus
ENSCPOG00000003565	-	98	69.603	ENSAOCG00000008883	pes	99	69.205	Amphiprion_ocellaris
ENSCPOG00000003565	-	98	70.812	ENSAPEG00000022652	pes	99	70.134	Amphiprion_percula
ENSCPOG00000003565	-	98	68.912	ENSATEG00000007439	pes	99	68.367	Anabas_testudineus
ENSCPOG00000003565	-	92	74.453	ENSAPLG00000014852	PES1	99	73.369	Anas_platyrhynchos
ENSCPOG00000003565	-	98	74.829	ENSACAG00000009723	PES1	99	75.704	Anolis_carolinensis
ENSCPOG00000003565	-	99	90.000	ENSANAG00000036411	PES1	99	89.899	Aotus_nancymaae
ENSCPOG00000003565	-	98	71.207	ENSANAG00000021598	-	94	71.624	Aotus_nancymaae
ENSCPOG00000003565	-	98	69.655	ENSACLG00000000815	pes	99	71.574	Astatotilapia_calliptera
ENSCPOG00000003565	-	99	62.287	ENSAMXG00000001216	pes	99	62.712	Astyanax_mexicanus
ENSCPOG00000003565	-	100	82.126	ENSBTAG00000007728	PES1	100	82.958	Bos_taurus
ENSCPOG00000003565	-	75	49.548	WBGene00003063	lpd-7	79	50.676	Caenorhabditis_elegans
ENSCPOG00000003565	-	99	90.339	ENSCJAG00000010617	PES1	99	89.899	Callithrix_jacchus
ENSCPOG00000003565	-	100	88.494	ENSCAFG00000012792	PES1	100	88.663	Canis_familiaris
ENSCPOG00000003565	-	100	88.644	ENSCAFG00020000977	PES1	100	89.322	Canis_lupus_dingo
ENSCPOG00000003565	-	100	86.318	ENSCHIG00000015760	PES1	100	86.265	Capra_hircus
ENSCPOG00000003565	-	100	90.847	ENSTSYG00000009798	PES1	100	90.847	Carlito_syrichta
ENSCPOG00000003565	-	99	82.601	ENSCAPG00000012218	-	99	82.601	Cavia_aperea
ENSCPOG00000003565	-	86	98.617	ENSCAPG00000007736	-	91	98.617	Cavia_aperea
ENSCPOG00000003565	-	99	88.983	ENSCCAG00000026457	PES1	99	88.889	Cebus_capucinus
ENSCPOG00000003565	-	99	89.189	ENSCATG00000036948	PES1	99	88.758	Cercocebus_atys
ENSCPOG00000003565	-	100	91.864	ENSCLAG00000010775	PES1	100	92.373	Chinchilla_lanigera
ENSCPOG00000003565	-	99	89.340	ENSCSAG00000009207	PES1	99	89.076	Chlorocebus_sabaeus
ENSCPOG00000003565	-	99	78.173	ENSCPBG00000007548	PES1	99	77.295	Chrysemys_picta_bellii
ENSCPOG00000003565	-	99	88.964	ENSCANG00000039970	PES1	99	89.189	Colobus_angolensis_palliatus
ENSCPOG00000003565	-	61	90.808	ENSCGRG00000015052	Pes1	97	90.808	Cricetulus_griseus_crigri
ENSCPOG00000003565	-	98	70.639	ENSCSEG00000017612	pes	100	71.525	Cynoglossus_semilaevis
ENSCPOG00000003565	-	98	71.379	ENSCVAG00000011600	pes	99	71.066	Cyprinodon_variegatus
ENSCPOG00000003565	-	97	70.783	ENSDARG00000018902	pes	99	70.897	Danio_rerio
ENSCPOG00000003565	-	98	56.649	ENSDNOG00000031909	-	100	57.340	Dasypus_novemcinctus
ENSCPOG00000003565	-	100	88.136	ENSDNOG00000015709	-	100	88.475	Dasypus_novemcinctus
ENSCPOG00000003565	-	96	89.223	ENSDORG00000016636	Pes1	100	90.796	Dipodomys_ordii
ENSCPOG00000003565	-	75	51.454	FBgn0032138	CG4364	96	42.857	Drosophila_melanogaster
ENSCPOG00000003565	-	81	57.290	ENSEBUG00000010234	pes	99	57.290	Eptatretus_burgeri
ENSCPOG00000003565	-	95	70.442	ENSEASG00005010295	PES1	100	71.380	Equus_asinus_asinus
ENSCPOG00000003565	-	100	88.481	ENSECAG00000002578	PES1	100	89.649	Equus_caballus
ENSCPOG00000003565	-	98	70.256	ENSELUG00000003253	pes	99	70.952	Esox_lucius
ENSCPOG00000003565	-	100	88.325	ENSFCAG00000008655	PES1	100	89.002	Felis_catus
ENSCPOG00000003565	-	92	75.181	ENSFALG00000006909	PES1	99	75.133	Ficedula_albicollis
ENSCPOG00000003565	-	100	89.899	ENSFDAG00000019029	PES1	100	90.741	Fukomys_damarensis
ENSCPOG00000003565	-	98	65.172	ENSFHEG00000000287	pes	99	65.821	Fundulus_heteroclitus
ENSCPOG00000003565	-	99	68.143	ENSGMOG00000013010	pes	99	68.825	Gadus_morhua
ENSCPOG00000003565	-	98	78.238	ENSGALG00000007778	PES1	99	77.797	Gallus_gallus
ENSCPOG00000003565	-	98	70.984	ENSGAFG00000012399	pes	99	70.389	Gambusia_affinis
ENSCPOG00000003565	-	99	68.942	ENSGACG00000009302	pes	99	68.942	Gasterosteus_aculeatus
ENSCPOG00000003565	-	99	78.680	ENSGAGG00000010897	PES1	99	78.078	Gopherus_agassizii
ENSCPOG00000003565	-	99	68.983	ENSGGOG00000028472	-	99	69.024	Gorilla_gorilla
ENSCPOG00000003565	-	99	89.831	ENSGGOG00000008530	PES1	99	89.226	Gorilla_gorilla
ENSCPOG00000003565	-	82	83.871	ENSHBUG00000008000	pes	98	83.871	Haplochromis_burtoni
ENSCPOG00000003565	-	100	90.909	ENSHGLG00000018472	PES1	100	91.261	Heterocephalus_glaber_female
ENSCPOG00000003565	-	100	90.970	ENSHGLG00100004887	PES1	100	91.304	Heterocephalus_glaber_male
ENSCPOG00000003565	-	99	69.610	ENSHCOG00000016666	pes	99	68.591	Hippocampus_comes
ENSCPOG00000003565	-	98	69.603	ENSIPUG00000020261	pes1	99	69.048	Ictalurus_punctatus
ENSCPOG00000003565	-	100	90.169	ENSSTOG00000013937	PES1	100	90.252	Ictidomys_tridecemlineatus
ENSCPOG00000003565	-	77	89.189	ENSJJAG00000010640	-	93	89.189	Jaculus_jaculus
ENSCPOG00000003565	-	100	89.492	ENSJJAG00000001782	-	100	89.661	Jaculus_jaculus
ENSCPOG00000003565	-	98	71.724	ENSKMAG00000015285	pes	99	70.995	Kryptolebias_marmoratus
ENSCPOG00000003565	-	98	66.096	ENSLBEG00000012366	pes	99	65.886	Labrus_bergylta
ENSCPOG00000003565	-	97	74.048	ENSLACG00000017116	PES1	99	73.898	Latimeria_chalumnae
ENSCPOG00000003565	-	98	66.609	ENSLOCG00000003935	pes	99	65.093	Lepisosteus_oculatus
ENSCPOG00000003565	-	79	65.226	ENSLAFG00000022882	PES1	100	65.496	Loxodonta_africana
ENSCPOG00000003565	-	99	89.492	ENSMFAG00000044708	PES1	99	89.226	Macaca_fascicularis
ENSCPOG00000003565	-	99	89.661	ENSMMUG00000017562	PES1	99	89.394	Macaca_mulatta
ENSCPOG00000003565	-	99	89.492	ENSMNEG00000029489	PES1	99	89.226	Macaca_nemestrina
ENSCPOG00000003565	-	99	65.152	ENSMLEG00000030317	-	99	65.424	Mandrillus_leucophaeus
ENSCPOG00000003565	-	99	89.340	ENSMLEG00000038584	PES1	99	89.076	Mandrillus_leucophaeus
ENSCPOG00000003565	-	98	70.000	ENSMAMG00000014668	pes	99	70.084	Mastacembelus_armatus
ENSCPOG00000003565	-	100	87.140	ENSMAUG00000018433	Pes1	100	87.037	Mesocricetus_auratus
ENSCPOG00000003565	-	100	90.000	ENSMICG00000010123	PES1	100	90.000	Microcebus_murinus
ENSCPOG00000003565	-	100	88.851	ENSMOCG00000021971	Pes1	100	89.376	Microtus_ochrogaster
ENSCPOG00000003565	-	98	61.938	ENSMMOG00000017812	pes	99	63.390	Mola_mola
ENSCPOG00000003565	-	98	80.416	ENSMODG00000009483	PES1	99	80.203	Monodelphis_domestica
ENSCPOG00000003565	-	98	71.034	ENSMALG00000012929	pes	99	71.502	Monopterus_albus
ENSCPOG00000003565	-	100	82.881	MGP_CAROLIEiJ_G0016021	Pes1	100	82.373	Mus_caroli
ENSCPOG00000003565	-	100	88.305	ENSMUSG00000020430	Pes1	100	88.027	Mus_musculus
ENSCPOG00000003565	-	100	96.923	MGP_PahariEiJ_G0016870	-	100	89.207	Mus_pahari
ENSCPOG00000003565	-	100	86.767	MGP_SPRETEiJ_G0016862	Pes1	100	86.644	Mus_spretus
ENSCPOG00000003565	-	100	89.002	ENSMPUG00000012950	PES1	100	88.423	Mustela_putorius_furo
ENSCPOG00000003565	-	100	90.169	ENSNGAG00000015282	Pes1	100	90.678	Nannospalax_galili
ENSCPOG00000003565	-	98	69.775	ENSNBRG00000006301	pes	99	71.743	Neolamprologus_brichardi
ENSCPOG00000003565	-	99	82.234	ENSNLEG00000003908	PES1	99	82.403	Nomascus_leucogenys
ENSCPOG00000003565	-	97	76.307	ENSMEUG00000011656	PES1	90	86.099	Notamacropus_eugenii
ENSCPOG00000003565	-	100	86.577	ENSOPRG00000000636	PES1	100	86.745	Ochotona_princeps
ENSCPOG00000003565	-	100	90.863	ENSODEG00000003187	PES1	100	92.386	Octodon_degus
ENSCPOG00000003565	-	98	71.503	ENSONIG00000013543	pes	99	71.237	Oreochromis_niloticus
ENSCPOG00000003565	-	62	76.099	ENSOANG00000012901	-	98	75.597	Ornithorhynchus_anatinus
ENSCPOG00000003565	-	99	88.475	ENSOCUG00000009658	PES1	100	88.514	Oryctolagus_cuniculus
ENSCPOG00000003565	-	98	69.483	ENSORLG00000007881	pes	99	69.270	Oryzias_latipes
ENSCPOG00000003565	-	98	70.000	ENSORLG00020000368	pes	99	69.779	Oryzias_latipes_hni
ENSCPOG00000003565	-	98	70.172	ENSORLG00015002220	pes	99	69.610	Oryzias_latipes_hsok
ENSCPOG00000003565	-	98	70.984	ENSOMEG00000002922	pes	99	70.119	Oryzias_melastigma
ENSCPOG00000003565	-	98	87.952	ENSOGAG00000005804	PES1	100	87.288	Otolemur_garnettii
ENSCPOG00000003565	-	95	68.376	ENSOARG00000008214	PES1	100	69.140	Ovis_aries
ENSCPOG00000003565	-	99	89.831	ENSPPAG00000029696	PES1	99	89.226	Pan_paniscus
ENSCPOG00000003565	-	100	89.171	ENSPPRG00000024146	PES1	100	88.832	Panthera_pardus
ENSCPOG00000003565	-	76	86.283	ENSPTIG00000021654	PES1	100	85.177	Panthera_tigris_altaica
ENSCPOG00000003565	-	99	62.098	ENSPTRG00000045557	-	99	62.185	Pan_troglodytes
ENSCPOG00000003565	-	99	90.000	ENSPTRG00000014251	PES1	99	89.394	Pan_troglodytes
ENSCPOG00000003565	-	99	89.509	ENSPANG00000009607	PES1	99	89.244	Papio_anubis
ENSCPOG00000003565	-	97	69.349	ENSPKIG00000024750	pes	99	69.565	Paramormyrops_kingsleyae
ENSCPOG00000003565	-	98	69.097	ENSPMGG00000019024	pes	100	69.966	Periophthalmus_magnuspinnatus
ENSCPOG00000003565	-	100	88.552	ENSPEMG00000012585	Pes1	100	89.057	Peromyscus_maniculatus_bairdii
ENSCPOG00000003565	-	98	80.069	ENSPCIG00000023994	PES1	99	80.579	Phascolarctos_cinereus
ENSCPOG00000003565	-	98	71.330	ENSPFOG00000014821	pes	99	70.558	Poecilia_formosa
ENSCPOG00000003565	-	98	71.503	ENSPLAG00000003811	pes	99	70.728	Poecilia_latipinna
ENSCPOG00000003565	-	98	71.330	ENSPMEG00000019878	pes	99	70.558	Poecilia_mexicana
ENSCPOG00000003565	-	98	68.512	ENSPREG00000022586	pes	99	68.814	Poecilia_reticulata
ENSCPOG00000003565	-	99	89.492	ENSPPYG00000011716	PES1	99	88.889	Pongo_abelii
ENSCPOG00000003565	-	75	92.308	ENSPCAG00000011542	PES1	75	92.308	Procavia_capensis
ENSCPOG00000003565	-	100	89.509	ENSPCOG00000016226	PES1	100	89.412	Propithecus_coquereli
ENSCPOG00000003565	-	99	69.744	ENSPNAG00000020800	pes	99	69.898	Pygocentrus_nattereri
ENSCPOG00000003565	-	100	88.475	ENSRNOG00000004515	Pes1	100	88.027	Rattus_norvegicus
ENSCPOG00000003565	-	99	89.983	ENSRBIG00000040634	PES1	99	89.983	Rhinopithecus_bieti
ENSCPOG00000003565	-	99	65.646	ENSRBIG00000034572	-	99	65.476	Rhinopithecus_bieti
ENSCPOG00000003565	-	99	89.983	ENSRROG00000028779	PES1	99	89.983	Rhinopithecus_roxellana
ENSCPOG00000003565	-	72	44.156	YGR103W	NOP7	97	40.230	Saccharomyces_cerevisiae
ENSCPOG00000003565	-	99	89.983	ENSSBOG00000026073	PES1	99	89.983	Saimiri_boliviensis_boliviensis
ENSCPOG00000003565	-	96	79.685	ENSSHAG00000002920	PES1	96	79.510	Sarcophilus_harrisii
ENSCPOG00000003565	-	98	69.535	ENSSFOG00015005010	pes1	99	69.048	Scleropages_formosus
ENSCPOG00000003565	-	99	70.478	ENSSMAG00000012102	pes	99	70.990	Scophthalmus_maximus
ENSCPOG00000003565	-	98	71.084	ENSSDUG00000013213	pes	99	70.598	Seriola_dumerili
ENSCPOG00000003565	-	98	71.207	ENSSLDG00000025373	pes	99	70.658	Seriola_lalandi_dorsalis
ENSCPOG00000003565	-	99	77.157	ENSSPUG00000018150	PES1	99	78.342	Sphenodon_punctatus
ENSCPOG00000003565	-	98	71.379	ENSSPAG00000018970	pes	99	71.743	Stegastes_partitus
ENSCPOG00000003565	-	100	85.548	ENSSSCG00000010010	PES1	100	85.832	Sus_scrofa
ENSCPOG00000003565	-	64	65.435	ENSTGUG00000015553	PES1	100	67.018	Taeniopygia_guttata
ENSCPOG00000003565	-	98	69.775	ENSTRUG00000015909	pes	99	69.492	Takifugu_rubripes
ENSCPOG00000003565	-	99	56.902	ENSTNIG00000015898	pes	99	56.784	Tetraodon_nigroviridis
ENSCPOG00000003565	-	99	86.942	ENSTBEG00000009825	PES1	99	87.307	Tupaia_belangeri
ENSCPOG00000003565	-	95	85.284	ENSTTRG00000001543	PES1	100	84.886	Tursiops_truncatus
ENSCPOG00000003565	-	100	88.870	ENSUAMG00000006854	PES1	100	89.094	Ursus_americanus
ENSCPOG00000003565	-	100	87.043	ENSUMAG00000016429	PES1	100	87.562	Ursus_maritimus
ENSCPOG00000003565	-	100	87.288	ENSVVUG00000029961	-	100	86.949	Vulpes_vulpes
ENSCPOG00000003565	-	100	88.136	ENSVVUG00000002684	-	100	88.644	Vulpes_vulpes
ENSCPOG00000003565	-	99	65.546	ENSXETG00000030097	PES1	99	65.436	Xenopus_tropicalis
ENSCPOG00000003565	-	98	69.723	ENSXCOG00000017009	pes	99	69.322	Xiphophorus_couchianus
ENSCPOG00000003565	-	98	69.031	ENSXMAG00000007708	pes	99	68.814	Xiphophorus_maculatus