EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000003691 (Gene tree)
Gene ID: 100714215
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 20784 bases
Position: chrDS562878.1:2396252-2417035
Accession: 100714215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003331	SRP54	PF00448.22	1.9e-78	1	1
ENSCPOP00000003331	SRP54_N	PF02881.19	5.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000003735	SRP54-201	1512	XM_003471847	ENSCPOP00000003331	503 (aa)	XP_003471895	H0V1G8

Gene Model

Click here to download ENSCPOG00000003691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003691	SRP54	100	99.603	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSCPOG00000003691	SRP54	100	95.437	ENSAPOG00000011314	srp54	100	95.437	Acanthochromis_polyacanthus
ENSCPOG00000003691	SRP54	100	99.603	ENSAMEG00000015544	SRP54	100	99.603	Ailuropoda_melanoleuca
ENSCPOG00000003691	SRP54	89	94.209	ENSACIG00000022831	srp54	97	94.209	Amphilophus_citrinellus
ENSCPOG00000003691	SRP54	100	95.437	ENSAOCG00000019401	srp54	100	95.437	Amphiprion_ocellaris
ENSCPOG00000003691	SRP54	100	95.437	ENSAPEG00000001977	srp54	100	95.437	Amphiprion_percula
ENSCPOG00000003691	SRP54	100	95.833	ENSATEG00000013877	srp54	100	95.833	Anabas_testudineus
ENSCPOG00000003691	SRP54	94	98.312	ENSAPLG00000010125	SRP54	95	98.312	Anas_platyrhynchos
ENSCPOG00000003691	SRP54	100	98.214	ENSACAG00000002103	-	100	98.214	Anolis_carolinensis
ENSCPOG00000003691	SRP54	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSCPOG00000003691	SRP54	86	95.612	ENSACAG00000010631	-	100	95.612	Anolis_carolinensis
ENSCPOG00000003691	SRP54	100	99.603	ENSANAG00000022133	SRP54	100	99.603	Aotus_nancymaae
ENSCPOG00000003691	SRP54	100	95.635	ENSACLG00000015866	srp54	100	95.635	Astatotilapia_calliptera
ENSCPOG00000003691	SRP54	100	95.238	ENSAMXG00000032669	SRP54	100	95.238	Astyanax_mexicanus
ENSCPOG00000003691	SRP54	100	99.603	ENSBTAG00000019085	SRP54	100	99.603	Bos_taurus
ENSCPOG00000003691	SRP54	98	71.486	WBGene00009012	F21D5.7	100	71.486	Caenorhabditis_elegans
ENSCPOG00000003691	SRP54	100	99.603	ENSCJAG00000006581	SRP54	100	99.603	Callithrix_jacchus
ENSCPOG00000003691	SRP54	100	99.603	ENSCAFG00000013331	SRP54	100	99.603	Canis_familiaris
ENSCPOG00000003691	SRP54	100	99.603	ENSCAFG00020023427	SRP54	100	99.603	Canis_lupus_dingo
ENSCPOG00000003691	SRP54	100	99.603	ENSCHIG00000026345	SRP54	100	99.603	Capra_hircus
ENSCPOG00000003691	SRP54	100	99.405	ENSTSYG00000002680	-	100	99.405	Carlito_syrichta
ENSCPOG00000003691	SRP54	94	88.211	ENSTSYG00000035333	-	93	88.211	Carlito_syrichta
ENSCPOG00000003691	SRP54	94	64.213	ENSCAPG00000008780	SRP54	100	64.213	Cavia_aperea
ENSCPOG00000003691	SRP54	90	99.762	ENSCCAG00000024179	SRP54	100	100.000	Cebus_capucinus
ENSCPOG00000003691	SRP54	100	99.603	ENSCATG00000034083	SRP54	100	99.603	Cercocebus_atys
ENSCPOG00000003691	SRP54	100	99.603	ENSCLAG00000015076	SRP54	100	99.603	Chinchilla_lanigera
ENSCPOG00000003691	SRP54	100	99.603	ENSCSAG00000015575	SRP54	100	99.603	Chlorocebus_sabaeus
ENSCPOG00000003691	SRP54	95	87.526	ENSCHOG00000008986	SRP54	100	87.526	Choloepus_hoffmanni
ENSCPOG00000003691	SRP54	100	98.810	ENSCPBG00000026195	SRP54	100	98.810	Chrysemys_picta_bellii
ENSCPOG00000003691	SRP54	100	81.349	ENSCING00000007380	-	100	81.349	Ciona_intestinalis
ENSCPOG00000003691	SRP54	100	99.603	ENSCANG00000028532	SRP54	100	99.603	Colobus_angolensis_palliatus
ENSCPOG00000003691	SRP54	100	99.206	ENSCGRG00001009525	-	100	99.206	Cricetulus_griseus_chok1gshd
ENSCPOG00000003691	SRP54	76	98.961	ENSCGRG00000009453	-	89	98.961	Cricetulus_griseus_crigri
ENSCPOG00000003691	SRP54	100	94.643	ENSCSEG00000012392	srp54	100	94.643	Cynoglossus_semilaevis
ENSCPOG00000003691	SRP54	100	95.437	ENSCVAG00000010395	srp54	100	95.437	Cyprinodon_variegatus
ENSCPOG00000003691	SRP54	100	95.635	ENSDARG00000098367	srp54	100	95.635	Danio_rerio
ENSCPOG00000003691	SRP54	100	99.603	ENSDNOG00000032525	SRP54	100	99.603	Dasypus_novemcinctus
ENSCPOG00000003691	SRP54	89	84.598	ENSDORG00000005159	-	97	84.598	Dipodomys_ordii
ENSCPOG00000003691	SRP54	96	77.113	FBgn0010747	Srp54k	98	76.707	Drosophila_melanogaster
ENSCPOG00000003691	SRP54	100	98.413	ENSETEG00000016307	-	100	98.413	Echinops_telfairi
ENSCPOG00000003691	SRP54	83	58.373	ENSETEG00000012102	-	99	58.373	Echinops_telfairi
ENSCPOG00000003691	SRP54	100	87.103	ENSEBUG00000009437	-	100	87.103	Eptatretus_burgeri
ENSCPOG00000003691	SRP54	100	99.603	ENSEASG00005002057	SRP54	100	99.603	Equus_asinus_asinus
ENSCPOG00000003691	SRP54	99	99.398	ENSECAG00000018042	SRP54	98	99.398	Equus_caballus
ENSCPOG00000003691	SRP54	100	82.937	ENSEEUG00000001511	SRP54	100	82.937	Erinaceus_europaeus
ENSCPOG00000003691	SRP54	100	94.841	ENSELUG00000003395	srp54	100	94.841	Esox_lucius
ENSCPOG00000003691	SRP54	100	99.405	ENSFCAG00000032033	SRP54	100	99.405	Felis_catus
ENSCPOG00000003691	SRP54	100	98.413	ENSFALG00000005995	SRP54	100	98.413	Ficedula_albicollis
ENSCPOG00000003691	SRP54	100	99.603	ENSFDAG00000016767	SRP54	100	99.603	Fukomys_damarensis
ENSCPOG00000003691	SRP54	100	95.040	ENSFHEG00000004263	srp54	100	95.040	Fundulus_heteroclitus
ENSCPOG00000003691	SRP54	95	89.749	ENSGMOG00000011391	srp54	100	89.749	Gadus_morhua
ENSCPOG00000003691	SRP54	100	98.413	ENSGALG00000023135	SRP54	100	98.413	Gallus_gallus
ENSCPOG00000003691	SRP54	100	95.635	ENSGAFG00000011586	srp54	100	95.635	Gambusia_affinis
ENSCPOG00000003691	SRP54	100	95.040	ENSGACG00000004181	srp54	100	95.040	Gasterosteus_aculeatus
ENSCPOG00000003691	SRP54	100	98.810	ENSGAGG00000014766	SRP54	100	98.810	Gopherus_agassizii
ENSCPOG00000003691	SRP54	100	99.603	ENSGGOG00000002926	SRP54	100	99.603	Gorilla_gorilla
ENSCPOG00000003691	SRP54	100	95.635	ENSHBUG00000005678	srp54	100	95.635	Haplochromis_burtoni
ENSCPOG00000003691	SRP54	100	99.603	ENSHGLG00000002850	SRP54	100	99.603	Heterocephalus_glaber_female
ENSCPOG00000003691	SRP54	100	99.603	ENSHGLG00100005263	SRP54	100	99.603	Heterocephalus_glaber_male
ENSCPOG00000003691	SRP54	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSCPOG00000003691	SRP54	100	93.651	ENSHCOG00000021127	srp54	100	93.651	Hippocampus_comes
ENSCPOG00000003691	SRP54	100	94.841	ENSIPUG00000001420	srp54	100	94.841	Ictalurus_punctatus
ENSCPOG00000003691	SRP54	100	99.603	ENSSTOG00000016023	SRP54	100	99.603	Ictidomys_tridecemlineatus
ENSCPOG00000003691	SRP54	87	76.364	ENSJJAG00000016404	-	100	76.364	Jaculus_jaculus
ENSCPOG00000003691	SRP54	100	94.444	ENSJJAG00000013417	-	100	94.444	Jaculus_jaculus
ENSCPOG00000003691	SRP54	100	95.040	ENSKMAG00000007707	srp54	100	95.040	Kryptolebias_marmoratus
ENSCPOG00000003691	SRP54	100	95.437	ENSLBEG00000021122	srp54	100	95.437	Labrus_bergylta
ENSCPOG00000003691	SRP54	100	95.437	ENSLBEG00000018690	srp54	100	95.437	Labrus_bergylta
ENSCPOG00000003691	SRP54	100	95.635	ENSLACG00000017890	SRP54	100	95.635	Latimeria_chalumnae
ENSCPOG00000003691	SRP54	100	96.429	ENSLOCG00000009440	srp54	100	96.429	Lepisosteus_oculatus
ENSCPOG00000003691	SRP54	100	99.603	ENSLAFG00000012007	SRP54	100	99.603	Loxodonta_africana
ENSCPOG00000003691	SRP54	100	99.603	ENSMFAG00000044371	SRP54	100	99.603	Macaca_fascicularis
ENSCPOG00000003691	SRP54	100	99.603	ENSMMUG00000015073	FAM177A1	100	99.603	Macaca_mulatta
ENSCPOG00000003691	SRP54	100	99.603	ENSMNEG00000006947	SRP54	100	99.603	Macaca_nemestrina
ENSCPOG00000003691	SRP54	100	99.603	ENSMLEG00000042251	SRP54	100	99.603	Mandrillus_leucophaeus
ENSCPOG00000003691	SRP54	100	95.635	ENSMAMG00000004803	srp54	100	95.635	Mastacembelus_armatus
ENSCPOG00000003691	SRP54	100	95.635	ENSMZEG00005027528	srp54	100	95.635	Maylandia_zebra
ENSCPOG00000003691	SRP54	100	94.071	ENSMGAG00000012481	SRP54	100	94.071	Meleagris_gallopavo
ENSCPOG00000003691	SRP54	100	99.405	ENSMAUG00000014447	-	100	99.405	Mesocricetus_auratus
ENSCPOG00000003691	SRP54	100	99.603	ENSMICG00000010270	SRP54	100	99.603	Microcebus_murinus
ENSCPOG00000003691	SRP54	87	99.545	ENSMOCG00000000948	-	100	99.545	Microtus_ochrogaster
ENSCPOG00000003691	SRP54	89	93.736	ENSMMOG00000020303	srp54	98	93.736	Mola_mola
ENSCPOG00000003691	SRP54	100	99.405	ENSMODG00000023150	-	100	99.405	Monodelphis_domestica
ENSCPOG00000003691	SRP54	100	99.405	ENSMODG00000012925	-	100	99.405	Monodelphis_domestica
ENSCPOG00000003691	SRP54	88	95.034	ENSMALG00000009163	srp54	98	95.034	Monopterus_albus
ENSCPOG00000003691	SRP54	100	99.405	MGP_CAROLIEiJ_G0017754	-	100	99.405	Mus_caroli
ENSCPOG00000003691	SRP54	100	98.611	ENSMUSG00000079108	Srp54c	100	98.611	Mus_musculus
ENSCPOG00000003691	SRP54	100	99.405	ENSMUSG00000112449	Srp54b	100	99.405	Mus_musculus
ENSCPOG00000003691	SRP54	100	99.405	ENSMUSG00000073079	Srp54a	100	99.405	Mus_musculus
ENSCPOG00000003691	SRP54	100	99.405	MGP_PahariEiJ_G0029510	-	100	99.405	Mus_pahari
ENSCPOG00000003691	SRP54	100	99.603	ENSMPUG00000016302	SRP54	100	99.603	Mustela_putorius_furo
ENSCPOG00000003691	SRP54	100	99.008	ENSMLUG00000008958	SRP54	100	99.008	Myotis_lucifugus
ENSCPOG00000003691	SRP54	100	89.484	ENSNGAG00000019806	-	100	89.484	Nannospalax_galili
ENSCPOG00000003691	SRP54	87	95.455	ENSNBRG00000006000	srp54	100	95.455	Neolamprologus_brichardi
ENSCPOG00000003691	SRP54	100	99.603	ENSNLEG00000003496	SRP54	100	99.603	Nomascus_leucogenys
ENSCPOG00000003691	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSCPOG00000003691	SRP54	57	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSCPOG00000003691	SRP54	100	99.603	ENSODEG00000004865	SRP54	100	99.603	Octodon_degus
ENSCPOG00000003691	SRP54	100	95.635	ENSONIG00000011768	srp54	100	95.635	Oreochromis_niloticus
ENSCPOG00000003691	SRP54	100	99.603	ENSOANG00000014051	SRP54	100	99.603	Ornithorhynchus_anatinus
ENSCPOG00000003691	SRP54	100	99.008	ENSOCUG00000007838	SRP54	100	99.008	Oryctolagus_cuniculus
ENSCPOG00000003691	SRP54	100	95.437	ENSORLG00000010027	srp54	100	95.437	Oryzias_latipes
ENSCPOG00000003691	SRP54	100	95.437	ENSORLG00020001878	srp54	100	95.437	Oryzias_latipes_hni
ENSCPOG00000003691	SRP54	100	95.437	ENSORLG00015021866	srp54	100	95.437	Oryzias_latipes_hsok
ENSCPOG00000003691	SRP54	100	95.238	ENSOMEG00000020952	srp54	100	95.238	Oryzias_melastigma
ENSCPOG00000003691	SRP54	100	99.603	ENSOGAG00000012188	SRP54	100	99.603	Otolemur_garnettii
ENSCPOG00000003691	SRP54	100	99.603	ENSOARG00000007160	SRP54	100	99.603	Ovis_aries
ENSCPOG00000003691	SRP54	100	99.603	ENSPPAG00000017434	SRP54	100	99.603	Pan_paniscus
ENSCPOG00000003691	SRP54	100	98.413	ENSPPRG00000014047	SRP54	100	98.413	Panthera_pardus
ENSCPOG00000003691	SRP54	100	99.405	ENSPTIG00000000744	SRP54	96	99.405	Panthera_tigris_altaica
ENSCPOG00000003691	SRP54	100	99.603	ENSPTRG00000006259	FAM177A1	100	99.603	Pan_troglodytes
ENSCPOG00000003691	SRP54	100	99.603	ENSPANG00000023853	SRP54	100	99.603	Papio_anubis
ENSCPOG00000003691	SRP54	100	95.238	ENSPKIG00000001953	srp54	100	95.238	Paramormyrops_kingsleyae
ENSCPOG00000003691	SRP54	100	98.611	ENSPSIG00000006476	SRP54	100	98.611	Pelodiscus_sinensis
ENSCPOG00000003691	SRP54	91	92.609	ENSPMGG00000004127	srp54	99	92.609	Periophthalmus_magnuspinnatus
ENSCPOG00000003691	SRP54	100	86.508	ENSPEMG00000019634	-	100	86.508	Peromyscus_maniculatus_bairdii
ENSCPOG00000003691	SRP54	100	88.294	ENSPMAG00000006078	-	100	88.294	Petromyzon_marinus
ENSCPOG00000003691	SRP54	100	99.405	ENSPCIG00000016175	SRP54	100	99.405	Phascolarctos_cinereus
ENSCPOG00000003691	SRP54	100	95.635	ENSPFOG00000008870	srp54	100	95.635	Poecilia_formosa
ENSCPOG00000003691	SRP54	100	95.635	ENSPLAG00000009889	srp54	100	95.635	Poecilia_latipinna
ENSCPOG00000003691	SRP54	100	95.635	ENSPMEG00000008601	srp54	100	95.635	Poecilia_mexicana
ENSCPOG00000003691	SRP54	100	95.635	ENSPREG00000004505	srp54	100	95.635	Poecilia_reticulata
ENSCPOG00000003691	SRP54	100	95.238	ENSPPYG00000005739	SRP54	100	95.238	Pongo_abelii
ENSCPOG00000003691	SRP54	100	95.437	ENSPCAG00000006268	SRP54	100	95.437	Procavia_capensis
ENSCPOG00000003691	SRP54	100	97.624	ENSPCOG00000022473	SRP54	100	97.624	Propithecus_coquereli
ENSCPOG00000003691	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSCPOG00000003691	SRP54	100	95.635	ENSPNYG00000009717	srp54	100	95.635	Pundamilia_nyererei
ENSCPOG00000003691	SRP54	100	95.437	ENSPNAG00000008544	srp54	100	95.437	Pygocentrus_nattereri
ENSCPOG00000003691	SRP54	100	99.206	ENSRNOG00000032776	Srp54a	100	99.206	Rattus_norvegicus
ENSCPOG00000003691	SRP54	100	99.603	ENSRROG00000041292	SRP54	100	99.603	Rhinopithecus_roxellana
ENSCPOG00000003691	SRP54	86	53.288	YPR088C	SRP54	95	48.467	Saccharomyces_cerevisiae
ENSCPOG00000003691	SRP54	94	99.578	ENSSBOG00000035145	SRP54	100	99.578	Saimiri_boliviensis_boliviensis
ENSCPOG00000003691	SRP54	68	100.000	ENSSHAG00000000671	SRP54	100	100.000	Sarcophilus_harrisii
ENSCPOG00000003691	SRP54	100	95.833	ENSSFOG00015013920	srp54	100	95.833	Scleropages_formosus
ENSCPOG00000003691	SRP54	100	89.513	ENSSMAG00000002441	srp54	100	89.513	Scophthalmus_maximus
ENSCPOG00000003691	SRP54	100	95.238	ENSSDUG00000018586	srp54	100	95.238	Seriola_dumerili
ENSCPOG00000003691	SRP54	100	95.040	ENSSLDG00000010476	srp54	100	95.040	Seriola_lalandi_dorsalis
ENSCPOG00000003691	SRP54	100	99.603	ENSSARG00000002744	SRP54	100	99.603	Sorex_araneus
ENSCPOG00000003691	SRP54	100	98.810	ENSSPUG00000013101	SRP54	100	98.810	Sphenodon_punctatus
ENSCPOG00000003691	SRP54	100	95.437	ENSSPAG00000002354	srp54	100	95.437	Stegastes_partitus
ENSCPOG00000003691	SRP54	100	99.603	ENSSSCG00000001955	SRP54	100	99.603	Sus_scrofa
ENSCPOG00000003691	SRP54	94	98.312	ENSTGUG00000011945	-	95	98.312	Taeniopygia_guttata
ENSCPOG00000003691	SRP54	100	94.643	ENSTRUG00000007057	srp54	100	94.643	Takifugu_rubripes
ENSCPOG00000003691	SRP54	100	94.246	ENSTNIG00000002589	srp54	100	94.246	Tetraodon_nigroviridis
ENSCPOG00000003691	SRP54	89	91.051	ENSTBEG00000011409	SRP54	100	91.051	Tupaia_belangeri
ENSCPOG00000003691	SRP54	100	89.484	ENSTTRG00000000928	SRP54	100	89.484	Tursiops_truncatus
ENSCPOG00000003691	SRP54	52	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSCPOG00000003691	SRP54	100	99.603	ENSUMAG00000011234	SRP54	100	99.603	Ursus_maritimus
ENSCPOG00000003691	SRP54	94	99.367	ENSVPAG00000005668	SRP54	100	99.367	Vicugna_pacos
ENSCPOG00000003691	SRP54	100	99.603	ENSVVUG00000019962	SRP54	100	99.603	Vulpes_vulpes
ENSCPOG00000003691	SRP54	100	81.854	ENSXETG00000012290	srp54	100	81.854	Xenopus_tropicalis
ENSCPOG00000003691	SRP54	88	95.485	ENSXCOG00000004658	srp54	96	95.485	Xiphophorus_couchianus
ENSCPOG00000003691	SRP54	100	95.635	ENSXMAG00000018315	srp54	100	95.635	Xiphophorus_maculatus