EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000003991 (Gene tree)
Gene ID: 100720096
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 24729 bases
Position: chrDS562859.1:46539127-46563855
Accession: 100720096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003602	KH_1	PF00013.29	8.8e-13	1	1
ENSCPOP00000003602	DEAD	PF00270.29	2.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000004035	-	1944	XM_003477899	ENSCPOP00000003602	647 (aa)	XP_003477947	H0V254

Gene Model

Click here to download ENSCPOG00000003991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000003991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000003991	-	68	30.942	ENSCPOG00000008420	DDX59	68	30.942
ENSCPOG00000003991	-	51	36.873	ENSCPOG00000007532	DDX18	50	36.765
ENSCPOG00000003991	-	50	34.091	ENSCPOG00000023923	DDX51	54	34.091
ENSCPOG00000003991	-	59	30.488	ENSCPOG00000013746	DDX28	76	30.488
ENSCPOG00000003991	-	60	33.671	ENSCPOG00000013626	DDX49	81	33.753
ENSCPOG00000003991	-	53	30.075	ENSCPOG00000014243	DDX31	54	30.075
ENSCPOG00000003991	-	57	39.378	ENSCPOG00000013557	-	58	40.052
ENSCPOG00000003991	-	59	36.364	ENSCPOG00000039190	-	63	35.821
ENSCPOG00000003991	-	69	43.956	ENSCPOG00000011790	DDX17	89	44.010
ENSCPOG00000003991	-	58	32.368	ENSCPOG00000004900	-	93	32.368
ENSCPOG00000003991	-	55	31.476	ENSCPOG00000006485	EIF4A3	86	31.476
ENSCPOG00000003991	-	56	32.603	ENSCPOG00000011183	-	90	32.172
ENSCPOG00000003991	-	63	32.619	ENSCPOG00000001232	DDX52	70	32.619
ENSCPOG00000003991	-	59	37.789	ENSCPOG00000008770	DDX41	63	37.789
ENSCPOG00000003991	-	53	31.856	ENSCPOG00000010015	DDX55	59	31.302
ENSCPOG00000003991	-	60	37.561	ENSCPOG00000020978	-	62	37.561
ENSCPOG00000003991	-	51	35.103	ENSCPOG00000004327	DDX4	50	35.103
ENSCPOG00000003991	-	89	69.898	ENSCPOG00000013960	-	89	69.898
ENSCPOG00000003991	-	68	38.784	ENSCPOG00000003278	DDX23	55	38.784
ENSCPOG00000003991	-	58	35.219	ENSCPOG00000035172	DDX47	83	35.219
ENSCPOG00000003991	-	69	44.053	ENSCPOG00000007133	DDX5	72	44.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000003991	-	100	82.615	ENSAMEG00000007851	-	100	82.615	Ailuropoda_melanoleuca
ENSCPOG00000003991	-	100	76.043	ENSBTAG00000021814	-	99	76.043	Bos_taurus
ENSCPOG00000003991	-	100	81.144	ENSCAFG00020010029	-	100	81.144	Canis_lupus_dingo
ENSCPOG00000003991	-	99	75.776	ENSCAFG00020002717	-	99	75.776	Canis_lupus_dingo
ENSCPOG00000003991	-	100	76.507	ENSCHIG00000017351	-	99	76.507	Capra_hircus
ENSCPOG00000003991	-	78	89.442	ENSCAPG00000004247	-	100	89.442	Cavia_aperea
ENSCPOG00000003991	-	100	86.574	ENSCLAG00000010261	-	100	86.574	Chinchilla_lanigera
ENSCPOG00000003991	-	61	78.994	ENSCHOG00000003450	-	69	78.994	Choloepus_hoffmanni
ENSCPOG00000003991	-	100	85.317	ENSCGRG00001001145	Ddx43	100	85.162	Cricetulus_griseus_chok1gshd
ENSCPOG00000003991	-	87	89.698	ENSCGRG00000010217	Ddx43	100	89.698	Cricetulus_griseus_crigri
ENSCPOG00000003991	-	100	82.462	ENSDNOG00000017589	-	99	82.462	Dasypus_novemcinctus
ENSCPOG00000003991	-	100	84.699	ENSDORG00000030010	Ddx43	100	84.699	Dipodomys_ordii
ENSCPOG00000003991	-	80	88.791	ENSETEG00000001887	-	81	88.791	Echinops_telfairi
ENSCPOG00000003991	-	100	82.253	ENSEASG00005004346	-	89	81.944	Equus_asinus_asinus
ENSCPOG00000003991	-	100	82.099	ENSECAG00000017971	DDX43	98	81.790	Equus_caballus
ENSCPOG00000003991	-	100	79.598	ENSFCAG00000031631	-	99	79.598	Felis_catus
ENSCPOG00000003991	-	87	93.428	ENSHGLG00000001118	-	100	93.428	Heterocephalus_glaber_female
ENSCPOG00000003991	-	97	90.400	ENSHGLG00100011895	-	99	90.032	Heterocephalus_glaber_male
ENSCPOG00000003991	-	87	79.041	ENSSTOG00000032538	-	100	79.041	Ictidomys_tridecemlineatus
ENSCPOG00000003991	-	100	84.699	ENSJJAG00000014184	Ddx43	100	84.699	Jaculus_jaculus
ENSCPOG00000003991	-	93	85.289	ENSLAFG00000012755	-	99	85.167	Loxodonta_africana
ENSCPOG00000003991	-	100	84.853	ENSMAUG00000001441	Ddx43	100	84.699	Mesocricetus_auratus
ENSCPOG00000003991	-	100	83.667	ENSMOCG00000012956	Ddx43	100	83.821	Microtus_ochrogaster
ENSCPOG00000003991	-	100	86.090	MGP_CAROLIEiJ_G0032467	Ddx43	100	85.935	Mus_caroli
ENSCPOG00000003991	-	100	86.399	ENSMUSG00000070291	Ddx43	100	86.244	Mus_musculus
ENSCPOG00000003991	-	91	90.873	MGP_PahariEiJ_G0015333	Ddx43	100	90.873	Mus_pahari
ENSCPOG00000003991	-	100	86.399	MGP_SPRETEiJ_G0033607	Ddx43	100	86.244	Mus_spretus
ENSCPOG00000003991	-	100	83.025	ENSMPUG00000004342	-	99	83.025	Mustela_putorius_furo
ENSCPOG00000003991	-	100	82.335	ENSMLUG00000017604	-	100	82.335	Myotis_lucifugus
ENSCPOG00000003991	-	100	85.008	ENSNGAG00000015102	Ddx43	100	85.471	Nannospalax_galili
ENSCPOG00000003991	-	75	89.286	ENSOPRG00000013523	-	86	89.286	Ochotona_princeps
ENSCPOG00000003991	-	84	91.728	ENSODEG00000016207	-	99	91.728	Octodon_degus
ENSCPOG00000003991	-	100	79.134	ENSOCUG00000006338	-	100	79.134	Oryctolagus_cuniculus
ENSCPOG00000003991	-	99	66.461	ENSOCUG00000025811	-	98	67.244	Oryctolagus_cuniculus
ENSCPOG00000003991	-	100	75.889	ENSOARG00000010873	-	99	75.889	Ovis_aries
ENSCPOG00000003991	-	100	79.907	ENSPTIG00000017842	-	99	79.907	Panthera_tigris_altaica
ENSCPOG00000003991	-	87	90.231	ENSPEMG00000023986	Ddx43	100	90.231	Peromyscus_maniculatus_bairdii
ENSCPOG00000003991	-	99	79.721	ENSPCAG00000005962	-	99	79.721	Procavia_capensis
ENSCPOG00000003991	-	87	87.943	ENSPVAG00000012718	-	99	87.943	Pteropus_vampyrus
ENSCPOG00000003991	-	100	86.090	ENSRNOG00000050868	Ddx43	100	85.935	Rattus_norvegicus
ENSCPOG00000003991	-	84	84.826	ENSSARG00000013493	-	99	84.826	Sorex_araneus
ENSCPOG00000003991	-	100	76.805	ENSSSCG00000004287	-	99	76.805	Sus_scrofa
ENSCPOG00000003991	-	87	73.357	ENSTTRG00000001488	-	99	73.357	Tursiops_truncatus
ENSCPOG00000003991	-	83	78.676	ENSUAMG00000012894	-	83	78.676	Ursus_americanus
ENSCPOG00000003991	-	100	82.562	ENSUMAG00000012291	-	99	82.562	Ursus_maritimus
ENSCPOG00000003991	-	94	72.623	ENSVPAG00000004969	-	100	72.623	Vicugna_pacos
ENSCPOG00000003991	-	100	81.298	ENSVVUG00000013908	-	100	81.298	Vulpes_vulpes