EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000004216 (Gene tree)
Gene ID: 100714195
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6039 bases
Position: chrDS562898.1:9042640-9048678
Accession: 100714195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003802	Gar1	PF04410.14	4.1e-39	1	1
ENSCPOP00000027230	Gar1	PF04410.14	4.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000040543	GAR1-201	1626	-	ENSCPOP00000027230	222 (aa)	-	A0A286XPM9
ENSCPOT00000004261	GAR1-202	1258	XM_003468052	ENSCPOP00000003802	217 (aa)	XP_003468100	H0V2M8

Gene Model

Click here to download ENSCPOG00000004216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000004216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000004216	GAR1	50	99.083	ENSG00000109534	GAR1	51	99.091	Homo_sapiens
ENSCPOG00000004216	GAR1	50	98.165	ENSAMEG00000004605	GAR1	54	98.182	Ailuropoda_melanoleuca
ENSCPOG00000004216	GAR1	50	99.083	ENSANAG00000021608	GAR1	50	99.091	Aotus_nancymaae
ENSCPOG00000004216	GAR1	50	100.000	ENSBTAG00000000748	GAR1	52	100.000	Bos_taurus
ENSCPOG00000004216	GAR1	50	99.083	ENSCJAG00000004041	GAR1	50	99.091	Callithrix_jacchus
ENSCPOG00000004216	GAR1	54	82.906	ENSCHIG00000011049	-	55	87.273	Capra_hircus
ENSCPOG00000004216	GAR1	51	100.000	ENSCHIG00000016026	-	53	100.000	Capra_hircus
ENSCPOG00000004216	GAR1	50	99.083	ENSTSYG00000013668	-	52	99.091	Carlito_syrichta
ENSCPOG00000004216	GAR1	58	86.719	ENSTSYG00000026632	-	56	90.909	Carlito_syrichta
ENSCPOG00000004216	GAR1	50	99.083	ENSCCAG00000029372	GAR1	50	99.091	Cebus_capucinus
ENSCPOG00000004216	GAR1	51	99.091	ENSCATG00000021854	GAR1	56	99.091	Cercocebus_atys
ENSCPOG00000004216	GAR1	100	94.977	ENSCLAG00000005335	GAR1	99	96.203	Chinchilla_lanigera
ENSCPOG00000004216	GAR1	55	95.000	ENSCHOG00000007484	-	51	95.000	Choloepus_hoffmanni
ENSCPOG00000004216	GAR1	51	98.182	ENSCANG00000039262	GAR1	51	98.182	Colobus_angolensis_palliatus
ENSCPOG00000004216	GAR1	50	95.413	ENSCGRG00001003919	Gar1	50	95.455	Cricetulus_griseus_chok1gshd
ENSCPOG00000004216	GAR1	60	90.299	ENSCSEG00000003525	gar1	65	84.828	Cynoglossus_semilaevis
ENSCPOG00000004216	GAR1	77	89.130	ENSCVAG00000002103	gar1	53	91.818	Cyprinodon_variegatus
ENSCPOG00000004216	GAR1	50	98.165	ENSDNOG00000037632	GAR1	56	98.182	Dasypus_novemcinctus
ENSCPOG00000004216	GAR1	51	96.396	ENSDORG00000000482	Gar1	51	96.364	Dipodomys_ordii
ENSCPOG00000004216	GAR1	51	98.182	ENSEASG00005004658	GAR1	51	98.182	Equus_asinus_asinus
ENSCPOG00000004216	GAR1	51	99.091	ENSECAG00000013624	GAR1	56	99.091	Equus_caballus
ENSCPOG00000004216	GAR1	65	57.042	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSCPOG00000004216	GAR1	50	99.083	ENSFCAG00000040791	-	53	99.091	Felis_catus
ENSCPOG00000004216	GAR1	75	90.769	ENSFHEG00000008068	gar1	51	90.909	Fundulus_heteroclitus
ENSCPOG00000004216	GAR1	50	98.165	ENSGGOG00000008681	GAR1	51	98.182	Gorilla_gorilla
ENSCPOG00000004216	GAR1	64	73.913	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSCPOG00000004216	GAR1	51	90.000	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSCPOG00000004216	GAR1	50	96.330	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSCPOG00000004216	GAR1	51	89.189	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSCPOG00000004216	GAR1	77	82.812	ENSLACG00000003306	GAR1	77	83.594	Latimeria_chalumnae
ENSCPOG00000004216	GAR1	93	82.119	ENSLOCG00000011711	GAR1	79	82.222	Lepisosteus_oculatus
ENSCPOG00000004216	GAR1	51	99.091	ENSMFAG00000024592	GAR1	51	99.091	Macaca_fascicularis
ENSCPOG00000004216	GAR1	50	83.333	ENSMFAG00000003572	-	54	81.818	Macaca_fascicularis
ENSCPOG00000004216	GAR1	51	99.091	ENSMMUG00000021225	GAR1	51	99.091	Macaca_mulatta
ENSCPOG00000004216	GAR1	50	83.333	ENSMMUG00000038929	-	65	65.244	Macaca_mulatta
ENSCPOG00000004216	GAR1	51	99.091	ENSMNEG00000042594	GAR1	51	99.091	Macaca_nemestrina
ENSCPOG00000004216	GAR1	51	99.091	ENSMLEG00000002496	GAR1	50	99.091	Mandrillus_leucophaeus
ENSCPOG00000004216	GAR1	50	95.413	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSCPOG00000004216	GAR1	52	97.321	ENSMICG00000003326	GAR1	51	98.182	Microcebus_murinus
ENSCPOG00000004216	GAR1	50	95.413	ENSMOCG00000001340	Gar1	99	94.937	Microtus_ochrogaster
ENSCPOG00000004216	GAR1	70	72.848	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSCPOG00000004216	GAR1	50	95.413	MGP_CAROLIEiJ_G0025627	Gar1	99	94.937	Mus_caroli
ENSCPOG00000004216	GAR1	51	95.455	ENSMUSG00000028010	Gar1	99	94.937	Mus_musculus
ENSCPOG00000004216	GAR1	51	97.273	MGP_PahariEiJ_G0027076	Gar1	99	94.937	Mus_pahari
ENSCPOG00000004216	GAR1	51	95.455	MGP_SPRETEiJ_G0026580	Gar1	99	94.937	Mus_spretus
ENSCPOG00000004216	GAR1	50	99.083	ENSMPUG00000008615	GAR1	53	99.091	Mustela_putorius_furo
ENSCPOG00000004216	GAR1	51	97.273	ENSNGAG00000008268	Gar1	99	94.805	Nannospalax_galili
ENSCPOG00000004216	GAR1	51	99.091	ENSNLEG00000016578	GAR1	51	99.091	Nomascus_leucogenys
ENSCPOG00000004216	GAR1	61	81.203	ENSNLEG00000034282	-	56	82.727	Nomascus_leucogenys
ENSCPOG00000004216	GAR1	50	98.165	ENSOCUG00000003901	GAR1	51	98.182	Oryctolagus_cuniculus
ENSCPOG00000004216	GAR1	50	98.165	ENSOGAG00000004693	GAR1	52	98.182	Otolemur_garnettii
ENSCPOG00000004216	GAR1	50	100.000	ENSOARG00000004910	GAR1	52	100.000	Ovis_aries
ENSCPOG00000004216	GAR1	50	99.083	ENSPPAG00000014081	GAR1	55	99.091	Pan_paniscus
ENSCPOG00000004216	GAR1	50	99.083	ENSPPRG00000023697	GAR1	53	99.091	Panthera_pardus
ENSCPOG00000004216	GAR1	50	99.083	ENSPTIG00000021565	GAR1	53	99.091	Panthera_tigris_altaica
ENSCPOG00000004216	GAR1	67	66.897	ENSPTRG00000049340	-	51	80.556	Pan_troglodytes
ENSCPOG00000004216	GAR1	51	99.091	ENSPTRG00000016364	GAR1	56	99.091	Pan_troglodytes
ENSCPOG00000004216	GAR1	51	99.091	ENSPANG00000000639	GAR1	51	99.091	Papio_anubis
ENSCPOG00000004216	GAR1	50	85.185	ENSPANG00000033062	-	69	71.429	Papio_anubis
ENSCPOG00000004216	GAR1	50	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSCPOG00000004216	GAR1	50	99.083	ENSPPYG00000014996	GAR1	51	99.091	Pongo_abelii
ENSCPOG00000004216	GAR1	58	92.800	ENSPCOG00000027049	GAR1	62	98.347	Propithecus_coquereli
ENSCPOG00000004216	GAR1	51	96.364	ENSRNOG00000061146	Gar1	64	96.364	Rattus_norvegicus
ENSCPOG00000004216	GAR1	52	81.250	ENSRBIG00000042411	-	53	80.909	Rhinopithecus_bieti
ENSCPOG00000004216	GAR1	51	99.091	ENSRROG00000028454	GAR1	56	99.091	Rhinopithecus_roxellana
ENSCPOG00000004216	GAR1	52	81.250	ENSRROG00000044348	-	53	80.909	Rhinopithecus_roxellana
ENSCPOG00000004216	GAR1	70	49.275	YHR089C	-	82	51.754	Saccharomyces_cerevisiae
ENSCPOG00000004216	GAR1	50	99.083	ENSSBOG00000024785	GAR1	51	99.091	Saimiri_boliviensis_boliviensis
ENSCPOG00000004216	GAR1	51	100.000	ENSSSCG00000009137	GAR1	54	100.000	Sus_scrofa
ENSCPOG00000004216	GAR1	50	99.083	ENSUMAG00000000776	GAR1	53	99.091	Ursus_maritimus
ENSCPOG00000004216	GAR1	50	99.083	ENSVVUG00000017612	GAR1	57	99.091	Vulpes_vulpes