EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000004349 (Gene tree)
Gene ID: 100730486
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 37391 bases
Position: chrDS562867.1:9942919-9980309
Accession: 100730486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003922	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000004395	RC3H1-201	3351	XM_005008390	ENSCPOP00000003922	1116 (aa)	XP_005008447	H0V2Y4

Gene Model

Click here to download ENSCPOG00000004349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000004349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000004349	RC3H1	92	53.254	ENSCPOG00000008511	RC3H2	85	54.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000004349	RC3H1	100	91.446	ENSG00000135870	RC3H1	100	91.534	Homo_sapiens
ENSCPOG00000004349	RC3H1	100	91.086	ENSAMEG00000015657	RC3H1	100	91.086	Ailuropoda_melanoleuca
ENSCPOG00000004349	RC3H1	100	84.367	ENSAPLG00000005341	RC3H1	100	84.367	Anas_platyrhynchos
ENSCPOG00000004349	RC3H1	100	81.349	ENSACAG00000015271	RC3H1	100	81.611	Anolis_carolinensis
ENSCPOG00000004349	RC3H1	100	91.093	ENSANAG00000036716	RC3H1	100	91.446	Aotus_nancymaae
ENSCPOG00000004349	RC3H1	100	90.300	ENSBTAG00000052708	RC3H1	100	90.564	Bos_taurus
ENSCPOG00000004349	RC3H1	100	90.741	ENSCJAG00000009106	RC3H1	100	91.093	Callithrix_jacchus
ENSCPOG00000004349	RC3H1	100	90.909	ENSCAFG00000014434	RC3H1	100	91.174	Canis_familiaris
ENSCPOG00000004349	RC3H1	100	90.829	ENSCAFG00020017112	RC3H1	99	97.303	Canis_lupus_dingo
ENSCPOG00000004349	RC3H1	100	90.380	ENSCHIG00000002873	RC3H1	100	90.644	Capra_hircus
ENSCPOG00000004349	RC3H1	99	90.371	ENSTSYG00000003913	RC3H1	99	90.548	Carlito_syrichta
ENSCPOG00000004349	RC3H1	100	89.153	ENSCCAG00000025652	RC3H1	100	89.506	Cebus_capucinus
ENSCPOG00000004349	RC3H1	100	91.446	ENSCATG00000033497	RC3H1	100	91.534	Cercocebus_atys
ENSCPOG00000004349	RC3H1	100	93.563	ENSCLAG00000011267	RC3H1	100	93.915	Chinchilla_lanigera
ENSCPOG00000004349	RC3H1	96	91.444	ENSCSAG00000011823	RC3H1	85	91.720	Chlorocebus_sabaeus
ENSCPOG00000004349	RC3H1	100	85.601	ENSCPBG00000014670	RC3H1	100	85.514	Chrysemys_picta_bellii
ENSCPOG00000004349	RC3H1	100	91.366	ENSCANG00000032120	RC3H1	100	91.454	Colobus_angolensis_palliatus
ENSCPOG00000004349	RC3H1	100	90.548	ENSCGRG00001020812	Rc3h1	100	90.548	Cricetulus_griseus_chok1gshd
ENSCPOG00000004349	RC3H1	100	90.548	ENSCGRG00000011952	Rc3h1	100	90.548	Cricetulus_griseus_crigri
ENSCPOG00000004349	RC3H1	54	86.838	ENSDNOG00000011494	RC3H1	99	87.319	Dasypus_novemcinctus
ENSCPOG00000004349	RC3H1	100	90.909	ENSDORG00000004855	Rc3h1	100	90.909	Dipodomys_ordii
ENSCPOG00000004349	RC3H1	81	91.746	ENSETEG00000012064	RC3H1	87	91.746	Echinops_telfairi
ENSCPOG00000004349	RC3H1	100	89.938	ENSEASG00005017000	RC3H1	100	90.115	Equus_asinus_asinus
ENSCPOG00000004349	RC3H1	100	89.762	ENSECAG00000021208	RC3H1	100	89.938	Equus_caballus
ENSCPOG00000004349	RC3H1	89	82.004	ENSEEUG00000014861	RC3H1	93	82.004	Erinaceus_europaeus
ENSCPOG00000004349	RC3H1	100	91.711	ENSFCAG00000014924	RC3H1	100	91.799	Felis_catus
ENSCPOG00000004349	RC3H1	100	84.077	ENSFALG00000002947	RC3H1	100	84.077	Ficedula_albicollis
ENSCPOG00000004349	RC3H1	100	93.386	ENSFDAG00000013303	RC3H1	100	93.651	Fukomys_damarensis
ENSCPOG00000004349	RC3H1	100	83.743	ENSGALG00000004587	RC3H1	100	83.743	Gallus_gallus
ENSCPOG00000004349	RC3H1	100	84.077	ENSGAGG00000018194	RC3H1	100	84.252	Gopherus_agassizii
ENSCPOG00000004349	RC3H1	100	84.710	ENSGGOG00000005735	RC3H1	100	84.798	Gorilla_gorilla
ENSCPOG00000004349	RC3H1	88	88.417	ENSHGLG00000004183	-	100	88.417	Heterocephalus_glaber_female
ENSCPOG00000004349	RC3H1	100	93.034	ENSHGLG00100008577	RC3H1	100	93.386	Heterocephalus_glaber_male
ENSCPOG00000004349	RC3H1	100	91.270	ENSSTOG00000016033	RC3H1	100	91.534	Ictidomys_tridecemlineatus
ENSCPOG00000004349	RC3H1	100	90.371	ENSJJAG00000018915	Rc3h1	100	90.459	Jaculus_jaculus
ENSCPOG00000004349	RC3H1	100	72.799	ENSLACG00000016186	RC3H1	100	76.050	Latimeria_chalumnae
ENSCPOG00000004349	RC3H1	97	92.168	ENSLAFG00000004367	RC3H1	100	92.441	Loxodonta_africana
ENSCPOG00000004349	RC3H1	100	91.358	ENSMFAG00000033725	RC3H1	100	91.623	Macaca_fascicularis
ENSCPOG00000004349	RC3H1	100	91.446	ENSMMUG00000000630	RC3H1	100	91.711	Macaca_mulatta
ENSCPOG00000004349	RC3H1	100	91.446	ENSMNEG00000035968	RC3H1	100	91.534	Macaca_nemestrina
ENSCPOG00000004349	RC3H1	100	91.358	ENSMLEG00000037455	RC3H1	100	91.446	Mandrillus_leucophaeus
ENSCPOG00000004349	RC3H1	97	90.927	ENSMAUG00000020864	Rc3h1	100	90.927	Mesocricetus_auratus
ENSCPOG00000004349	RC3H1	100	91.880	ENSMICG00000003000	RC3H1	100	92.145	Microcebus_murinus
ENSCPOG00000004349	RC3H1	93	89.100	ENSMOCG00000016587	Rc3h1	98	89.100	Microtus_ochrogaster
ENSCPOG00000004349	RC3H1	100	88.194	ENSMODG00000004289	RC3H1	100	88.106	Monodelphis_domestica
ENSCPOG00000004349	RC3H1	100	89.753	MGP_CAROLIEiJ_G0014756	Rc3h1	100	89.753	Mus_caroli
ENSCPOG00000004349	RC3H1	100	89.488	ENSMUSG00000040423	Rc3h1	100	89.488	Mus_musculus
ENSCPOG00000004349	RC3H1	100	89.664	MGP_PahariEiJ_G0027992	Rc3h1	100	89.664	Mus_pahari
ENSCPOG00000004349	RC3H1	100	89.311	MGP_SPRETEiJ_G0015563	Rc3h1	100	89.311	Mus_spretus
ENSCPOG00000004349	RC3H1	100	90.917	ENSMPUG00000004747	RC3H1	100	90.917	Mustela_putorius_furo
ENSCPOG00000004349	RC3H1	100	90.026	ENSMLUG00000011127	RC3H1	100	90.291	Myotis_lucifugus
ENSCPOG00000004349	RC3H1	100	91.254	ENSNGAG00000011135	Rc3h1	100	91.254	Nannospalax_galili
ENSCPOG00000004349	RC3H1	100	91.358	ENSNLEG00000015327	RC3H1	100	91.446	Nomascus_leucogenys
ENSCPOG00000004349	RC3H1	99	78.249	ENSOPRG00000013068	RC3H1	99	78.073	Ochotona_princeps
ENSCPOG00000004349	RC3H1	100	93.563	ENSODEG00000014185	RC3H1	100	93.563	Octodon_degus
ENSCPOG00000004349	RC3H1	100	86.475	ENSOANG00000000924	RC3H1	100	86.475	Ornithorhynchus_anatinus
ENSCPOG00000004349	RC3H1	99	90.242	ENSOCUG00000004930	RC3H1	98	90.510	Oryctolagus_cuniculus
ENSCPOG00000004349	RC3H1	100	84.581	ENSOGAG00000004044	RC3H1	100	84.934	Otolemur_garnettii
ENSCPOG00000004349	RC3H1	100	90.535	ENSOARG00000013011	RC3H1	100	90.798	Ovis_aries
ENSCPOG00000004349	RC3H1	100	91.278	ENSPPAG00000039253	RC3H1	100	91.366	Pan_paniscus
ENSCPOG00000004349	RC3H1	100	90.997	ENSPPRG00000009007	RC3H1	100	91.262	Panthera_pardus
ENSCPOG00000004349	RC3H1	100	91.213	ENSPTIG00000015326	RC3H1	100	91.652	Panthera_tigris_altaica
ENSCPOG00000004349	RC3H1	100	91.278	ENSPTRG00000001702	RC3H1	100	91.366	Pan_troglodytes
ENSCPOG00000004349	RC3H1	100	91.358	ENSPANG00000008886	RC3H1	100	91.446	Papio_anubis
ENSCPOG00000004349	RC3H1	100	84.912	ENSPSIG00000016181	RC3H1	100	85.175	Pelodiscus_sinensis
ENSCPOG00000004349	RC3H1	100	89.841	ENSPEMG00000011966	Rc3h1	100	89.859	Peromyscus_maniculatus_bairdii
ENSCPOG00000004349	RC3H1	69	89.747	ENSPCIG00000002058	RC3H1	95	97.534	Phascolarctos_cinereus
ENSCPOG00000004349	RC3H1	100	88.713	ENSPPYG00000000490	RC3H1	98	91.205	Pongo_abelii
ENSCPOG00000004349	RC3H1	80	94.737	ENSPCAG00000010775	RC3H1	87	94.737	Procavia_capensis
ENSCPOG00000004349	RC3H1	82	89.850	ENSPCOG00000021795	RC3H1	96	90.171	Propithecus_coquereli
ENSCPOG00000004349	RC3H1	100	82.935	ENSPVAG00000007593	RC3H1	100	83.289	Pteropus_vampyrus
ENSCPOG00000004349	RC3H1	97	60.125	ENSPNAG00000023439	rc3h1a	95	90.090	Pygocentrus_nattereri
ENSCPOG00000004349	RC3H1	100	91.366	ENSRBIG00000037743	RC3H1	100	91.454	Rhinopithecus_bieti
ENSCPOG00000004349	RC3H1	100	91.358	ENSRROG00000036546	RC3H1	100	91.623	Rhinopithecus_roxellana
ENSCPOG00000004349	RC3H1	93	83.822	ENSSBOG00000010664	RC3H1	100	85.147	Saimiri_boliviensis_boliviensis
ENSCPOG00000004349	RC3H1	100	87.324	ENSSHAG00000007589	RC3H1	100	87.236	Sarcophilus_harrisii
ENSCPOG00000004349	RC3H1	86	86.261	ENSSARG00000004660	RC3H1	86	86.261	Sorex_araneus
ENSCPOG00000004349	RC3H1	100	80.105	ENSSPUG00000018472	RC3H1	100	80.716	Sphenodon_punctatus
ENSCPOG00000004349	RC3H1	100	91.615	ENSSSCG00000015498	RC3H1	100	91.880	Sus_scrofa
ENSCPOG00000004349	RC3H1	100	84.609	ENSTGUG00000004090	RC3H1	100	84.609	Taeniopygia_guttata
ENSCPOG00000004349	RC3H1	88	91.973	ENSTBEG00000005015	RC3H1	89	91.973	Tupaia_belangeri
ENSCPOG00000004349	RC3H1	100	90.581	ENSTTRG00000008572	RC3H1	100	90.845	Tursiops_truncatus
ENSCPOG00000004349	RC3H1	100	90.644	ENSUAMG00000019525	RC3H1	100	90.644	Ursus_americanus
ENSCPOG00000004349	RC3H1	100	91.182	ENSUMAG00000020087	RC3H1	100	91.182	Ursus_maritimus
ENSCPOG00000004349	RC3H1	91	97.748	ENSVPAG00000002591	RC3H1	92	97.748	Vicugna_pacos
ENSCPOG00000004349	RC3H1	100	90.589	ENSVVUG00000014201	RC3H1	100	90.853	Vulpes_vulpes
ENSCPOG00000004349	RC3H1	100	76.522	ENSXETG00000020030	rc3h1	100	76.435	Xenopus_tropicalis