EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000004418 (Gene tree)
Gene ID: 100725143
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 14012 bases
Position: chrDS562863.1:7204204-7218215
Accession: 100725143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000003987	HAT	PF02184.16	2e-39	1	2
ENSCPOP00000003987	HAT	PF02184.16	2e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000004466	CRNKL1-201	3973	XM_005006575	ENSCPOP00000003987	687 (aa)	XP_005006632	H0V341

Gene Model

Click here to download ENSCPOG00000004418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000004418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000004418	CRNKL1	100	95.342	ENSG00000101343	CRNKL1	100	95.342	Homo_sapiens
ENSCPOG00000004418	CRNKL1	99	85.839	ENSAPOG00000009705	crnkl1	97	85.778	Acanthochromis_polyacanthus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSAMEG00000000270	CRNKL1	83	96.507	Ailuropoda_melanoleuca
ENSCPOG00000004418	CRNKL1	98	85.905	ENSACIG00000015267	crnkl1	89	85.905	Amphilophus_citrinellus
ENSCPOG00000004418	CRNKL1	99	85.985	ENSAOCG00000021964	crnkl1	91	85.985	Amphiprion_ocellaris
ENSCPOG00000004418	CRNKL1	99	85.839	ENSAPEG00000015041	crnkl1	91	85.839	Amphiprion_percula
ENSCPOG00000004418	CRNKL1	99	85.441	ENSATEG00000001068	crnkl1	89	85.441	Anabas_testudineus
ENSCPOG00000004418	CRNKL1	99	89.811	ENSAPLG00000013105	CRNKL1	99	89.811	Anas_platyrhynchos
ENSCPOG00000004418	CRNKL1	99	91.801	ENSACAG00000005284	CRNKL1	99	91.801	Anolis_carolinensis
ENSCPOG00000004418	CRNKL1	92	95.728	ENSANAG00000024889	CRNKL1	100	95.728	Aotus_nancymaae
ENSCPOG00000004418	CRNKL1	99	86.558	ENSACLG00000010813	crnkl1	90	86.558	Astatotilapia_calliptera
ENSCPOG00000004418	CRNKL1	97	86.446	ENSAMXG00000018334	crnkl1	92	84.526	Astyanax_mexicanus
ENSCPOG00000004418	CRNKL1	100	95.924	ENSBTAG00000008472	CRNKL1	99	95.924	Bos_taurus
ENSCPOG00000004418	CRNKL1	93	62.267	WBGene00019762	M03F8.3	91	61.527	Caenorhabditis_elegans
ENSCPOG00000004418	CRNKL1	100	95.342	ENSCJAG00000005393	CRNKL1	100	95.342	Callithrix_jacchus
ENSCPOG00000004418	CRNKL1	99	96.176	ENSCAFG00000005333	CRNKL1	94	96.215	Canis_familiaris
ENSCPOG00000004418	CRNKL1	100	96.215	ENSCAFG00020027488	CRNKL1	100	96.215	Canis_lupus_dingo
ENSCPOG00000004418	CRNKL1	100	94.760	ENSCHIG00000013171	CRNKL1	99	94.760	Capra_hircus
ENSCPOG00000004418	CRNKL1	100	95.197	ENSTSYG00000004197	CRNKL1	100	95.197	Carlito_syrichta
ENSCPOG00000004418	CRNKL1	95	99.838	ENSCAPG00000010501	CRNKL1	99	99.838	Cavia_aperea
ENSCPOG00000004418	CRNKL1	100	95.342	ENSCCAG00000027037	CRNKL1	100	95.342	Cebus_capucinus
ENSCPOG00000004418	CRNKL1	100	95.342	ENSCATG00000034247	CRNKL1	100	95.342	Cercocebus_atys
ENSCPOG00000004418	CRNKL1	100	98.399	ENSCLAG00000013859	CRNKL1	100	98.399	Chinchilla_lanigera
ENSCPOG00000004418	CRNKL1	100	95.342	ENSCSAG00000011434	CRNKL1	100	95.342	Chlorocebus_sabaeus
ENSCPOG00000004418	CRNKL1	99	96.029	ENSCHOG00000006371	CRNKL1	84	96.070	Choloepus_hoffmanni
ENSCPOG00000004418	CRNKL1	99	92.847	ENSCPBG00000023501	CRNKL1	99	92.847	Chrysemys_picta_bellii
ENSCPOG00000004418	CRNKL1	96	69.789	ENSCING00000002709	-	99	68.129	Ciona_intestinalis
ENSCPOG00000004418	CRNKL1	100	95.197	ENSCANG00000038789	CRNKL1	100	95.197	Colobus_angolensis_palliatus
ENSCPOG00000004418	CRNKL1	100	97.380	ENSCGRG00001001115	-	99	97.380	Cricetulus_griseus_chok1gshd
ENSCPOG00000004418	CRNKL1	100	97.380	ENSCGRG00001000687	-	99	97.380	Cricetulus_griseus_chok1gshd
ENSCPOG00000004418	CRNKL1	100	97.380	ENSCGRG00000007854	Crnkl1	99	97.380	Cricetulus_griseus_crigri
ENSCPOG00000004418	CRNKL1	98	85.778	ENSCSEG00000005594	crnkl1	86	85.778	Cynoglossus_semilaevis
ENSCPOG00000004418	CRNKL1	97	86.787	ENSCVAG00000015172	crnkl1	92	84.818	Cyprinodon_variegatus
ENSCPOG00000004418	CRNKL1	96	86.103	ENSDARG00000007901	crnkl1	90	84.795	Danio_rerio
ENSCPOG00000004418	CRNKL1	99	96.491	ENSDNOG00000016226	CRNKL1	95	96.491	Dasypus_novemcinctus
ENSCPOG00000004418	CRNKL1	97	87.313	ENSDORG00000023724	-	99	87.313	Dipodomys_ordii
ENSCPOG00000004418	CRNKL1	100	95.527	ENSDORG00000000394	-	100	95.527	Dipodomys_ordii
ENSCPOG00000004418	CRNKL1	97	86.866	ENSDORG00000030174	-	99	86.866	Dipodomys_ordii
ENSCPOG00000004418	CRNKL1	96	69.520	FBgn0000377	crn	97	68.421	Drosophila_melanogaster
ENSCPOG00000004418	CRNKL1	100	84.134	ENSETEG00000003711	CRNKL1	84	84.134	Echinops_telfairi
ENSCPOG00000004418	CRNKL1	99	60.159	ENSEBUG00000013461	crnkl1	96	54.612	Eptatretus_burgeri
ENSCPOG00000004418	CRNKL1	100	96.507	ENSEASG00005002072	CRNKL1	100	96.507	Equus_asinus_asinus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSECAG00000022215	CRNKL1	100	96.507	Equus_caballus
ENSCPOG00000004418	CRNKL1	99	93.382	ENSEEUG00000000413	CRNKL1	92	93.450	Erinaceus_europaeus
ENSCPOG00000004418	CRNKL1	97	84.731	ENSELUG00000015424	crnkl1	97	83.333	Esox_lucius
ENSCPOG00000004418	CRNKL1	100	96.507	ENSFCAG00000000714	CRNKL1	100	96.507	Felis_catus
ENSCPOG00000004418	CRNKL1	98	90.476	ENSFALG00000004611	CRNKL1	100	90.476	Ficedula_albicollis
ENSCPOG00000004418	CRNKL1	100	98.108	ENSFDAG00000000604	CRNKL1	100	98.108	Fukomys_damarensis
ENSCPOG00000004418	CRNKL1	98	85.884	ENSFHEG00000013163	crnkl1	88	85.884	Fundulus_heteroclitus
ENSCPOG00000004418	CRNKL1	97	84.880	ENSGMOG00000007609	crnkl1	94	83.236	Gadus_morhua
ENSCPOG00000004418	CRNKL1	99	92.701	ENSGALG00000008429	CRNKL1	99	92.701	Gallus_gallus
ENSCPOG00000004418	CRNKL1	97	86.186	ENSGAFG00000014249	crnkl1	90	84.526	Gambusia_affinis
ENSCPOG00000004418	CRNKL1	99	84.064	ENSGACG00000011852	crnkl1	91	84.064	Gasterosteus_aculeatus
ENSCPOG00000004418	CRNKL1	95	91.463	ENSGAGG00000021233	CRNKL1	100	91.489	Gopherus_agassizii
ENSCPOG00000004418	CRNKL1	100	95.342	ENSGGOG00000014176	CRNKL1	100	95.342	Gorilla_gorilla
ENSCPOG00000004418	CRNKL1	99	86.411	ENSHBUG00000005246	crnkl1	90	86.411	Haplochromis_burtoni
ENSCPOG00000004418	CRNKL1	100	98.253	ENSHGLG00000010856	CRNKL1	100	98.253	Heterocephalus_glaber_female
ENSCPOG00000004418	CRNKL1	100	98.253	ENSHGLG00100011521	CRNKL1	100	98.253	Heterocephalus_glaber_male
ENSCPOG00000004418	CRNKL1	97	83.958	ENSHCOG00000006420	crnkl1	98	82.551	Hippocampus_comes
ENSCPOG00000004418	CRNKL1	97	75.038	ENSIPUG00000006836	-	99	73.715	Ictalurus_punctatus
ENSCPOG00000004418	CRNKL1	93	67.818	ENSIPUG00000000315	-	100	69.025	Ictalurus_punctatus
ENSCPOG00000004418	CRNKL1	94	86.287	ENSIPUG00000006751	crnkl1	93	84.478	Ictalurus_punctatus
ENSCPOG00000004418	CRNKL1	100	97.962	ENSSTOG00000014747	CRNKL1	100	97.962	Ictidomys_tridecemlineatus
ENSCPOG00000004418	CRNKL1	100	94.879	ENSJJAG00000016926	Crnkl1	100	94.879	Jaculus_jaculus
ENSCPOG00000004418	CRNKL1	99	85.924	ENSKMAG00000003620	crnkl1	86	85.924	Kryptolebias_marmoratus
ENSCPOG00000004418	CRNKL1	97	70.579	ENSLBEG00000003543	crnkl1	92	70.760	Labrus_bergylta
ENSCPOG00000004418	CRNKL1	99	87.262	ENSLACG00000001129	CRNKL1	99	87.262	Latimeria_chalumnae
ENSCPOG00000004418	CRNKL1	97	88.705	ENSLOCG00000016889	crnkl1	95	87.281	Lepisosteus_oculatus
ENSCPOG00000004418	CRNKL1	100	95.494	ENSLAFG00000004512	CRNKL1	100	96.221	Loxodonta_africana
ENSCPOG00000004418	CRNKL1	100	95.342	ENSMFAG00000039893	CRNKL1	100	95.342	Macaca_fascicularis
ENSCPOG00000004418	CRNKL1	100	95.342	ENSMMUG00000007709	CRNKL1	100	95.342	Macaca_mulatta
ENSCPOG00000004418	CRNKL1	100	95.342	ENSMNEG00000037490	CRNKL1	100	95.342	Macaca_nemestrina
ENSCPOG00000004418	CRNKL1	100	95.342	ENSMLEG00000034885	CRNKL1	100	95.342	Mandrillus_leucophaeus
ENSCPOG00000004418	CRNKL1	99	85.255	ENSMAMG00000008757	crnkl1	90	85.255	Mastacembelus_armatus
ENSCPOG00000004418	CRNKL1	99	86.558	ENSMZEG00005022345	crnkl1	90	86.558	Maylandia_zebra
ENSCPOG00000004418	CRNKL1	99	91.983	ENSMGAG00000003452	CRNKL1	94	91.983	Meleagris_gallopavo
ENSCPOG00000004418	CRNKL1	100	97.234	ENSMAUG00000020764	Crnkl1	99	97.234	Mesocricetus_auratus
ENSCPOG00000004418	CRNKL1	100	95.779	ENSMICG00000006048	CRNKL1	100	95.779	Microcebus_murinus
ENSCPOG00000004418	CRNKL1	97	68.919	ENSMOCG00000004179	-	96	69.139	Microtus_ochrogaster
ENSCPOG00000004418	CRNKL1	100	88.984	ENSMOCG00000000681	-	99	88.984	Microtus_ochrogaster
ENSCPOG00000004418	CRNKL1	92	84.786	ENSMMOG00000017601	crnkl1	97	84.786	Mola_mola
ENSCPOG00000004418	CRNKL1	100	85.444	ENSMODG00000010857	-	99	85.444	Monodelphis_domestica
ENSCPOG00000004418	CRNKL1	100	90.948	ENSMODG00000005961	-	99	90.948	Monodelphis_domestica
ENSCPOG00000004418	CRNKL1	98	62.218	ENSMALG00000011211	crnkl1	89	68.336	Monopterus_albus
ENSCPOG00000004418	CRNKL1	100	96.798	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.798	Mus_caroli
ENSCPOG00000004418	CRNKL1	100	96.943	ENSMUSG00000001767	Crnkl1	99	96.943	Mus_musculus
ENSCPOG00000004418	CRNKL1	100	95.197	MGP_PahariEiJ_G0025838	Crnkl1	99	95.197	Mus_pahari
ENSCPOG00000004418	CRNKL1	100	96.798	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.798	Mus_spretus
ENSCPOG00000004418	CRNKL1	100	96.361	ENSMPUG00000001226	CRNKL1	100	96.361	Mustela_putorius_furo
ENSCPOG00000004418	CRNKL1	99	95.742	ENSMLUG00000016513	CRNKL1	89	95.785	Myotis_lucifugus
ENSCPOG00000004418	CRNKL1	100	95.143	ENSNGAG00000023097	Crnkl1	100	95.143	Nannospalax_galili
ENSCPOG00000004418	CRNKL1	99	86.706	ENSNBRG00000007867	crnkl1	89	86.706	Neolamprologus_brichardi
ENSCPOG00000004418	CRNKL1	100	91.849	ENSNLEG00000009862	CRNKL1	100	91.849	Nomascus_leucogenys
ENSCPOG00000004418	CRNKL1	100	84.738	ENSMEUG00000002361	-	99	84.738	Notamacropus_eugenii
ENSCPOG00000004418	CRNKL1	98	93.731	ENSMEUG00000012167	-	100	93.731	Notamacropus_eugenii
ENSCPOG00000004418	CRNKL1	75	66.409	ENSOPRG00000009242	-	61	66.409	Ochotona_princeps
ENSCPOG00000004418	CRNKL1	100	98.253	ENSODEG00000012175	CRNKL1	100	98.253	Octodon_degus
ENSCPOG00000004418	CRNKL1	99	87.001	ENSONIG00000018728	crnkl1	89	87.001	Oreochromis_niloticus
ENSCPOG00000004418	CRNKL1	99	96.647	ENSOCUG00000015484	CRNKL1	83	96.647	Oryctolagus_cuniculus
ENSCPOG00000004418	CRNKL1	99	83.066	ENSORLG00000017240	crnkl1	96	79.710	Oryzias_latipes
ENSCPOG00000004418	CRNKL1	97	84.985	ENSORLG00020001742	crnkl1	89	84.985	Oryzias_latipes_hni
ENSCPOG00000004418	CRNKL1	99	83.212	ENSORLG00015019564	crnkl1	91	83.212	Oryzias_latipes_hsok
ENSCPOG00000004418	CRNKL1	99	84.234	ENSOMEG00000019895	crnkl1	91	84.234	Oryzias_melastigma
ENSCPOG00000004418	CRNKL1	100	95.633	ENSOGAG00000011544	CRNKL1	100	95.633	Otolemur_garnettii
ENSCPOG00000004418	CRNKL1	99	95.882	ENSOARG00000002150	CRNKL1	89	95.924	Ovis_aries
ENSCPOG00000004418	CRNKL1	99	94.118	ENSPPAG00000027847	CRNKL1	83	94.178	Pan_paniscus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSPPRG00000001955	CRNKL1	100	96.507	Panthera_pardus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSPTIG00000007393	CRNKL1	100	96.507	Panthera_tigris_altaica
ENSCPOG00000004418	CRNKL1	100	95.342	ENSPTRG00000030609	CRNKL1	100	95.342	Pan_troglodytes
ENSCPOG00000004418	CRNKL1	100	95.342	ENSPANG00000017420	CRNKL1	100	95.342	Papio_anubis
ENSCPOG00000004418	CRNKL1	96	81.805	ENSPKIG00000017093	crnkl1	89	81.085	Paramormyrops_kingsleyae
ENSCPOG00000004418	CRNKL1	99	91.654	ENSPSIG00000012705	CRNKL1	99	91.654	Pelodiscus_sinensis
ENSCPOG00000004418	CRNKL1	99	79.179	ENSPMGG00000006263	crnkl1	96	78.676	Periophthalmus_magnuspinnatus
ENSCPOG00000004418	CRNKL1	100	97.234	ENSPEMG00000000073	-	99	97.234	Peromyscus_maniculatus_bairdii
ENSCPOG00000004418	CRNKL1	99	81.105	ENSPMAG00000002250	crnkl1	99	81.105	Petromyzon_marinus
ENSCPOG00000004418	CRNKL1	100	93.013	ENSPCIG00000025825	CRNKL1	96	93.013	Phascolarctos_cinereus
ENSCPOG00000004418	CRNKL1	97	86.036	ENSPFOG00000005102	crnkl1	93	84.157	Poecilia_formosa
ENSCPOG00000004418	CRNKL1	97	86.036	ENSPLAG00000007288	crnkl1	90	84.035	Poecilia_latipinna
ENSCPOG00000004418	CRNKL1	97	86.186	ENSPMEG00000008865	crnkl1	93	84.302	Poecilia_mexicana
ENSCPOG00000004418	CRNKL1	97	85.736	ENSPREG00000012615	crnkl1	92	83.918	Poecilia_reticulata
ENSCPOG00000004418	CRNKL1	99	95.000	ENSPPYG00000010747	CRNKL1	81	95.051	Pongo_abelii
ENSCPOG00000004418	CRNKL1	99	90.294	ENSPCAG00000003296	CRNKL1	85	90.393	Procavia_capensis
ENSCPOG00000004418	CRNKL1	99	94.412	ENSPCOG00000017608	CRNKL1	83	94.469	Propithecus_coquereli
ENSCPOG00000004418	CRNKL1	100	96.361	ENSPVAG00000006207	CRNKL1	83	96.361	Pteropus_vampyrus
ENSCPOG00000004418	CRNKL1	99	86.411	ENSPNYG00000001977	crnkl1	90	86.411	Pundamilia_nyererei
ENSCPOG00000004418	CRNKL1	98	87.313	ENSPNAG00000001507	crnkl1	98	82.824	Pygocentrus_nattereri
ENSCPOG00000004418	CRNKL1	100	96.507	ENSRNOG00000040045	Crnkl1	99	96.507	Rattus_norvegicus
ENSCPOG00000004418	CRNKL1	100	96.943	ENSRNOG00000010587	Crnkl1	99	96.943	Rattus_norvegicus
ENSCPOG00000004418	CRNKL1	100	95.197	ENSRBIG00000031770	CRNKL1	100	95.197	Rhinopithecus_bieti
ENSCPOG00000004418	CRNKL1	100	95.051	ENSRROG00000040450	CRNKL1	100	95.051	Rhinopithecus_roxellana
ENSCPOG00000004418	CRNKL1	94	37.591	YLR117C	CLF1	99	37.681	Saccharomyces_cerevisiae
ENSCPOG00000004418	CRNKL1	100	95.342	ENSSBOG00000029672	CRNKL1	100	95.342	Saimiri_boliviensis_boliviensis
ENSCPOG00000004418	CRNKL1	96	73.596	ENSSHAG00000011199	CRNKL1	99	73.596	Sarcophilus_harrisii
ENSCPOG00000004418	CRNKL1	96	86.405	ENSSFOG00015000946	crnkl1	89	84.795	Scleropages_formosus
ENSCPOG00000004418	CRNKL1	99	83.819	ENSSMAG00000007933	crnkl1	89	83.819	Scophthalmus_maximus
ENSCPOG00000004418	CRNKL1	99	79.155	ENSSDUG00000012625	crnkl1	87	79.823	Seriola_dumerili
ENSCPOG00000004418	CRNKL1	99	86.431	ENSSLDG00000021413	crnkl1	88	86.431	Seriola_lalandi_dorsalis
ENSCPOG00000004418	CRNKL1	100	95.197	ENSSARG00000006443	CRNKL1	82	95.197	Sorex_araneus
ENSCPOG00000004418	CRNKL1	99	91.801	ENSSPUG00000005254	CRNKL1	99	91.801	Sphenodon_punctatus
ENSCPOG00000004418	CRNKL1	97	87.387	ENSSPAG00000016150	crnkl1	86	87.387	Stegastes_partitus
ENSCPOG00000004418	CRNKL1	100	96.215	ENSSSCG00000038587	CRNKL1	99	96.215	Sus_scrofa
ENSCPOG00000004418	CRNKL1	99	91.108	ENSTGUG00000007645	CRNKL1	98	91.108	Taeniopygia_guttata
ENSCPOG00000004418	CRNKL1	98	79.701	ENSTRUG00000015417	crnkl1	90	79.087	Takifugu_rubripes
ENSCPOG00000004418	CRNKL1	97	83.958	ENSTNIG00000010710	crnkl1	99	82.653	Tetraodon_nigroviridis
ENSCPOG00000004418	CRNKL1	91	94.400	ENSTBEG00000001304	CRNKL1	82	94.462	Tupaia_belangeri
ENSCPOG00000004418	CRNKL1	91	91.840	ENSTTRG00000000484	CRNKL1	81	91.930	Tursiops_truncatus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSUAMG00000018586	CRNKL1	100	96.507	Ursus_americanus
ENSCPOG00000004418	CRNKL1	100	96.507	ENSUMAG00000024957	CRNKL1	100	96.507	Ursus_maritimus
ENSCPOG00000004418	CRNKL1	99	96.176	ENSVVUG00000012559	CRNKL1	82	96.215	Vulpes_vulpes
ENSCPOG00000004418	CRNKL1	99	89.083	ENSXETG00000009698	crnkl1	99	89.083	Xenopus_tropicalis
ENSCPOG00000004418	CRNKL1	97	85.307	ENSXCOG00000000824	crnkl1	91	83.602	Xiphophorus_couchianus
ENSCPOG00000004418	CRNKL1	97	86.186	ENSXMAG00000006896	crnkl1	91	84.457	Xiphophorus_maculatus