EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000004544 (Gene tree)
Gene ID: 100728605
Gene Symbol: -
Alias: -
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 115081 bases
Position: chrDS562897.1:3206361-3321441
Accession: 100728605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021792	ResIII	PF04851.15	3e-09	1	1
ENSCPOP00000004094	ResIII	PF04851.15	7.3e-09	1	1
ENSCPOP00000021792	DEAD	PF00270.29	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000042889	-	6670	XM_003468400	ENSCPOP00000021792	1539 (aa)	XP_003468448	A0A286X8P2
ENSCPOT00000004593	-	1422	-	ENSCPOP00000004094	473 (aa)	-	H0V3D5

Gene Model

Click here to download ENSCPOG00000004544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000004544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000004544	-	91	90.909	ENSG00000182150	ERCC6L2	100	96.341	Homo_sapiens
ENSCPOG00000004544	-	91	90.210	ENSAMEG00000011657	ERCC6L2	98	89.018	Ailuropoda_melanoleuca
ENSCPOG00000004544	-	90	67.599	ENSATEG00000016700	ercc6l2	99	43.162	Anabas_testudineus
ENSCPOG00000004544	-	90	77.804	ENSAPLG00000006105	ERCC6L2	98	77.160	Anas_platyrhynchos
ENSCPOG00000004544	-	91	77.156	ENSACAG00000012947	ERCC6L2	99	76.642	Anolis_carolinensis
ENSCPOG00000004544	-	90	63.869	ENSACLG00000015088	ercc6l2	97	54.800	Astatotilapia_calliptera
ENSCPOG00000004544	-	91	90.210	ENSCJAG00000008862	ERCC6L2	98	88.968	Callithrix_jacchus
ENSCPOG00000004544	-	90	90.421	ENSCAFG00000001219	ERCC6L2	99	78.340	Canis_familiaris
ENSCPOG00000004544	-	91	89.744	ENSTSYG00000013871	ERCC6L2	98	89.301	Carlito_syrichta
ENSCPOG00000004544	-	90	92.037	ENSCAPG00000009212	ERCC6L2	100	92.037	Cavia_aperea
ENSCPOG00000004544	-	91	90.210	ENSCCAG00000026980	ERCC6L2	98	89.685	Cebus_capucinus
ENSCPOG00000004544	-	82	79.534	ENSCHOG00000006282	ERCC6L2	98	77.221	Choloepus_hoffmanni
ENSCPOG00000004544	-	90	81.542	ENSCPBG00000005414	ERCC6L2	99	56.258	Chrysemys_picta_bellii
ENSCPOG00000004544	-	91	90.443	ENSCANG00000039934	ERCC6L2	98	89.398	Colobus_angolensis_palliatus
ENSCPOG00000004544	-	99	83.333	ENSCGRG00001022738	Ercc6l2	99	86.657	Cricetulus_griseus_chok1gshd
ENSCPOG00000004544	-	90	87.383	ENSCGRG00000015854	Ercc6l2	99	77.051	Cricetulus_griseus_crigri
ENSCPOG00000004544	-	90	65.967	ENSDARG00000012403	ercc6l2	71	67.615	Danio_rerio
ENSCPOG00000004544	-	91	87.646	ENSDORG00000010788	Ercc6l2	97	85.906	Dipodomys_ordii
ENSCPOG00000004544	-	91	86.977	ENSETEG00000010686	ERCC6L2	98	84.029	Echinops_telfairi
ENSCPOG00000004544	-	71	76.558	ENSEEUG00000009341	ERCC6L2	98	70.344	Erinaceus_europaeus
ENSCPOG00000004544	-	90	63.636	ENSELUG00000002272	ercc6l2	99	42.830	Esox_lucius
ENSCPOG00000004544	-	90	79.206	ENSFALG00000003400	ERCC6L2	99	71.555	Ficedula_albicollis
ENSCPOG00000004544	-	91	93.007	ENSFDAG00000000805	ERCC6L2	99	91.726	Fukomys_damarensis
ENSCPOG00000004544	-	90	64.103	ENSFHEG00000017890	ercc6l2	86	45.604	Fundulus_heteroclitus
ENSCPOG00000004544	-	90	64.336	ENSGMOG00000007751	ercc6l2	83	61.190	Gadus_morhua
ENSCPOG00000004544	-	90	77.103	ENSGALG00000012621	ERCC6L2	99	52.301	Gallus_gallus
ENSCPOG00000004544	-	90	64.569	ENSGAFG00000012386	ercc6l2	99	40.834	Gambusia_affinis
ENSCPOG00000004544	-	90	66.200	ENSGACG00000006992	ercc6l2	87	61.631	Gasterosteus_aculeatus
ENSCPOG00000004544	-	90	82.009	ENSGAGG00000021675	ERCC6L2	99	55.796	Gopherus_agassizii
ENSCPOG00000004544	-	91	90.909	ENSGGOG00000002705	ERCC6L2	98	88.825	Gorilla_gorilla
ENSCPOG00000004544	-	62	100.000	ENSHGLG00000009488	ERCC6L2	94	95.187	Heterocephalus_glaber_female
ENSCPOG00000004544	-	90	66.200	ENSIPUG00000000283	ercc6l2	80	68.297	Ictalurus_punctatus
ENSCPOG00000004544	-	95	83.669	ENSJJAG00000018150	Ercc6l2	99	86.103	Jaculus_jaculus
ENSCPOG00000004544	-	90	65.967	ENSLBEG00000003016	ercc6l2	80	57.565	Labrus_bergylta
ENSCPOG00000004544	-	90	76.047	ENSLACG00000011767	ERCC6L2	99	51.538	Latimeria_chalumnae
ENSCPOG00000004544	-	90	71.096	ENSLOCG00000009238	ercc6l2	98	46.891	Lepisosteus_oculatus
ENSCPOG00000004544	-	91	88.578	ENSLAFG00000013092	ERCC6L2	99	85.980	Loxodonta_africana
ENSCPOG00000004544	-	91	91.142	ENSMNEG00000035630	ERCC6L2	98	89.685	Macaca_nemestrina
ENSCPOG00000004544	-	91	91.142	ENSMLEG00000019530	ERCC6L2	98	89.828	Mandrillus_leucophaeus
ENSCPOG00000004544	-	90	87.383	ENSMAUG00000004820	-	100	76.123	Mesocricetus_auratus
ENSCPOG00000004544	-	91	90.210	ENSMICG00000029160	ERCC6L2	98	89.971	Microcebus_murinus
ENSCPOG00000004544	-	98	84.301	ENSMOCG00000019362	-	99	84.301	Microtus_ochrogaster
ENSCPOG00000004544	-	90	62.558	ENSMMOG00000001419	ercc6l2	88	56.005	Mola_mola
ENSCPOG00000004544	-	91	67.442	ENSMALG00000016933	ercc6l2	88	61.216	Monopterus_albus
ENSCPOG00000004544	-	98	84.582	MGP_CAROLIEiJ_G0018635	-	99	87.262	Mus_caroli
ENSCPOG00000004544	-	98	84.582	ENSMUSG00000021470	Ercc6l2	99	86.227	Mus_musculus
ENSCPOG00000004544	-	98	85.011	MGP_PahariEiJ_G0019699	-	99	87.994	Mus_pahari
ENSCPOG00000004544	-	98	84.797	MGP_SPRETEiJ_G0019515	-	99	87.262	Mus_spretus
ENSCPOG00000004544	-	90	90.187	ENSMPUG00000006738	ERCC6L2	99	79.478	Mustela_putorius_furo
ENSCPOG00000004544	-	91	86.512	ENSMLUG00000000845	ERCC6L2	98	86.552	Myotis_lucifugus
ENSCPOG00000004544	-	91	89.044	ENSNGAG00000016174	Ercc6l2	99	88.666	Nannospalax_galili
ENSCPOG00000004544	-	91	91.142	ENSNLEG00000016784	ERCC6L2	98	89.971	Nomascus_leucogenys
ENSCPOG00000004544	-	91	86.713	ENSOPRG00000011647	ERCC6L2	99	87.762	Ochotona_princeps
ENSCPOG00000004544	-	90	94.860	ENSODEG00000016588	ERCC6L2	99	93.438	Octodon_degus
ENSCPOG00000004544	-	91	63.256	ENSONIG00000015139	ercc6l2	98	61.583	Oreochromis_niloticus
ENSCPOG00000004544	-	91	89.744	ENSOCUG00000000442	-	98	89.504	Oryctolagus_cuniculus
ENSCPOG00000004544	-	90	65.501	ENSORLG00000004287	ercc6l2	91	48.569	Oryzias_latipes
ENSCPOG00000004544	-	90	64.802	ENSORLG00020002133	ercc6l2	96	43.625	Oryzias_latipes_hni
ENSCPOG00000004544	-	90	65.035	ENSORLG00015010250	ercc6l2	86	59.474	Oryzias_latipes_hsok
ENSCPOG00000004544	-	90	64.103	ENSOMEG00000021983	ercc6l2	96	42.980	Oryzias_melastigma
ENSCPOG00000004544	-	90	91.355	ENSOGAG00000003146	ERCC6L2	97	82.759	Otolemur_garnettii
ENSCPOG00000004544	-	90	90.654	ENSOARG00000008546	ERCC6L2	99	77.710	Ovis_aries
ENSCPOG00000004544	-	91	91.142	ENSPPAG00000035061	ERCC6L2	98	89.255	Pan_paniscus
ENSCPOG00000004544	-	91	89.977	ENSPPRG00000019238	ERCC6L2	98	89.096	Panthera_pardus
ENSCPOG00000004544	-	91	89.510	ENSPTIG00000009148	ERCC6L2	98	88.809	Panthera_tigris_altaica
ENSCPOG00000004544	-	91	90.909	ENSPTRG00000048689	ERCC6L2	98	89.112	Pan_troglodytes
ENSCPOG00000004544	-	90	65.734	ENSPKIG00000016799	ercc6l2	92	55.584	Paramormyrops_kingsleyae
ENSCPOG00000004544	-	90	82.243	ENSPSIG00000010627	ERCC6L2	99	79.562	Pelodiscus_sinensis
ENSCPOG00000004544	-	82	65.891	ENSPMGG00000016547	ercc6l2	89	61.613	Periophthalmus_magnuspinnatus
ENSCPOG00000004544	-	90	89.252	ENSPEMG00000006631	-	99	77.948	Peromyscus_maniculatus_bairdii
ENSCPOG00000004544	-	91	84.651	ENSPCIG00000020095	-	97	67.464	Phascolarctos_cinereus
ENSCPOG00000004544	-	90	64.802	ENSPFOG00000019333	ercc6l2	95	55.808	Poecilia_formosa
ENSCPOG00000004544	-	90	64.336	ENSPREG00000016702	ercc6l2	88	56.581	Poecilia_reticulata
ENSCPOG00000004544	-	90	90.888	ENSPPYG00000019412	-	99	68.823	Pongo_abelii
ENSCPOG00000004544	-	82	91.473	ENSPCOG00000026714	ERCC6L2	98	85.530	Propithecus_coquereli
ENSCPOG00000004544	-	91	88.811	ENSPVAG00000003926	ERCC6L2	98	81.492	Pteropus_vampyrus
ENSCPOG00000004544	-	90	63.869	ENSPNYG00000015347	ercc6l2	94	56.433	Pundamilia_nyererei
ENSCPOG00000004544	-	90	68.531	ENSPNAG00000011413	ercc6l2	94	61.017	Pygocentrus_nattereri
ENSCPOG00000004544	-	90	87.617	ENSRNOG00000019175	Ercc6l2	98	69.947	Rattus_norvegicus
ENSCPOG00000004544	-	85	90.571	ENSRBIG00000018434	ERCC6L2	98	86.533	Rhinopithecus_bieti
ENSCPOG00000004544	-	91	91.375	ENSRROG00000029000	ERCC6L2	98	89.828	Rhinopithecus_roxellana
ENSCPOG00000004544	-	81	81.654	ENSSHAG00000000781	-	100	81.654	Sarcophilus_harrisii
ENSCPOG00000004544	-	90	65.035	ENSSFOG00015006394	ercc6l2	88	57.126	Scleropages_formosus
ENSCPOG00000004544	-	90	65.501	ENSSLDG00000018663	ercc6l2	92	57.741	Seriola_lalandi_dorsalis
ENSCPOG00000004544	-	90	77.336	ENSSPUG00000004336	ERCC6L2	98	56.861	Sphenodon_punctatus
ENSCPOG00000004544	-	90	63.636	ENSSPAG00000004484	ercc6l2	83	59.509	Stegastes_partitus
ENSCPOG00000004544	-	90	79.206	ENSTGUG00000000524	ERCC6L2	100	77.372	Taeniopygia_guttata
ENSCPOG00000004544	-	90	63.109	ENSTRUG00000014634	ercc6l2	87	54.276	Takifugu_rubripes
ENSCPOG00000004544	-	81	88.342	ENSTBEG00000014213	ERCC6L2	87	92.157	Tupaia_belangeri
ENSCPOG00000004544	-	91	80.653	ENSTTRG00000005372	ERCC6L2	98	83.214	Tursiops_truncatus
ENSCPOG00000004544	-	91	92.075	ENSVPAG00000004701	ERCC6L2	100	90.521	Vicugna_pacos
ENSCPOG00000004544	-	90	74.126	ENSXETG00000014835	ercc6l2	96	66.113	Xenopus_tropicalis
ENSCPOG00000004544	-	90	64.336	ENSXMAG00000023695	ercc6l2	86	45.169	Xiphophorus_maculatus