EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005024 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 7375 bases
Position: chrDS562866.1:17831215-17838589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000004522	KH_1	PF00013.29	1e-16	1	1
ENSCPOP00000031467	KH_1	PF00013.29	3.2e-09	1	1
ENSCPOP00000022502	KH_1	PF00013.29	2.4e-05	1	1
ENSCPOP00000031467	KH_2	PF07650.17	5.4e-05	1	1
ENSCPOP00000022502	ROKNT	PF08067.11	1e-27	1	1
ENSCPOP00000031467	ROKNT	PF08067.11	1.8e-27	1	1
ENSCPOP00000004522	ROKNT	PF08067.11	6.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000044077	-	1157	-	ENSCPOP00000031467	97 (aa)	-	A0A286Y1N9
ENSCPOT00000045339	-	234	-	ENSCPOP00000022502	77 (aa)	-	A0A286XAP9
ENSCPOT00000005078	-	435	-	ENSCPOP00000004522	145 (aa)	-	H0V4H8

Gene Model

Click here to download ENSCPOG00000005024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005024	-	100	100.000	ENSG00000165119	HNRNPK	100	100.000	Homo_sapiens
ENSCPOG00000005024	-	94	91.241	ENSACLG00000001537	hnrpkl	71	91.667	Astatotilapia_calliptera
ENSCPOG00000005024	-	100	91.358	ENSBTAG00000052260	-	90	91.358	Bos_taurus
ENSCPOG00000005024	-	73	53.774	WBGene00017816	hrpk-1	51	55.882	Caenorhabditis_elegans
ENSCPOG00000005024	-	100	100.000	ENSCJAG00000003750	HNRNPK	100	100.000	Callithrix_jacchus
ENSCPOG00000005024	-	100	100.000	ENSCAFG00020023808	-	100	100.000	Canis_lupus_dingo
ENSCPOG00000005024	-	100	81.818	ENSCHIG00000020267	-	72	86.301	Capra_hircus
ENSCPOG00000005024	-	100	87.179	ENSCHIG00000013200	-	93	87.179	Capra_hircus
ENSCPOG00000005024	-	100	67.568	ENSTSYG00000036427	-	94	66.234	Carlito_syrichta
ENSCPOG00000005024	-	94	87.500	ENSTSYG00000032524	-	84	81.443	Carlito_syrichta
ENSCPOG00000005024	-	94	98.611	ENSTSYG00000030225	-	100	95.946	Carlito_syrichta
ENSCPOG00000005024	-	100	100.000	ENSCCAG00000034658	HNRNPK	100	100.000	Cebus_capucinus
ENSCPOG00000005024	-	100	100.000	ENSCATG00000036875	HNRNPK	100	100.000	Cercocebus_atys
ENSCPOG00000005024	-	100	87.013	ENSCATG00000033862	-	100	89.189	Cercocebus_atys
ENSCPOG00000005024	-	100	100.000	ENSCLAG00000005883	HNRNPK	100	100.000	Chinchilla_lanigera
ENSCPOG00000005024	-	100	96.104	ENSCLAG00000006078	-	100	96.104	Chinchilla_lanigera
ENSCPOG00000005024	-	92	40.132	ENSCSAVG00000010212	-	87	40.132	Ciona_savignyi
ENSCPOG00000005024	-	94	73.611	ENSCANG00000012016	-	89	75.342	Colobus_angolensis_palliatus
ENSCPOG00000005024	-	94	90.278	ENSCANG00000013858	-	76	85.870	Colobus_angolensis_palliatus
ENSCPOG00000005024	-	100	98.701	ENSCGRG00001016951	-	100	98.701	Cricetulus_griseus_chok1gshd
ENSCPOG00000005024	-	100	98.701	ENSCGRG00000013338	-	100	98.701	Cricetulus_griseus_crigri
ENSCPOG00000005024	-	99	90.411	ENSDARG00000007034	hnrpkl	83	87.143	Danio_rerio
ENSCPOG00000005024	-	97	84.397	ENSDARG00000018914	hnrnpk	95	84.397	Danio_rerio
ENSCPOG00000005024	-	100	100.000	ENSDORG00000016024	-	100	100.000	Dipodomys_ordii
ENSCPOG00000005024	-	100	100.000	ENSFDAG00000012548	HNRNPK	100	100.000	Fukomys_damarensis
ENSCPOG00000005024	-	100	89.610	ENSGGOG00000037201	-	100	93.243	Gorilla_gorilla
ENSCPOG00000005024	-	100	96.104	ENSHGLG00000005742	-	100	96.104	Heterocephalus_glaber_female
ENSCPOG00000005024	-	97	81.053	ENSHGLG00000005224	-	91	81.053	Heterocephalus_glaber_female
ENSCPOG00000005024	-	100	100.000	ENSHGLG00000017317	-	100	100.000	Heterocephalus_glaber_female
ENSCPOG00000005024	-	100	100.000	ENSHGLG00100014828	HNRNPK	100	100.000	Heterocephalus_glaber_male
ENSCPOG00000005024	-	100	89.655	ENSHGLG00100008300	-	90	89.773	Heterocephalus_glaber_male
ENSCPOG00000005024	-	100	100.000	ENSSTOG00000014107	HNRNPK	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000005024	-	100	98.701	ENSJJAG00000013297	-	100	98.701	Jaculus_jaculus
ENSCPOG00000005024	-	100	93.506	ENSJJAG00000011709	-	100	97.297	Jaculus_jaculus
ENSCPOG00000005024	-	100	92.208	ENSJJAG00000011565	-	100	95.946	Jaculus_jaculus
ENSCPOG00000005024	-	100	100.000	ENSMFAG00000042755	HNRNPK	100	100.000	Macaca_fascicularis
ENSCPOG00000005024	-	94	93.056	ENSMFAG00000042200	-	93	83.544	Macaca_fascicularis
ENSCPOG00000005024	-	94	93.056	ENSMMUG00000040407	-	73	94.444	Macaca_mulatta
ENSCPOG00000005024	-	94	91.667	ENSMNEG00000030513	-	93	81.928	Macaca_nemestrina
ENSCPOG00000005024	-	100	100.000	ENSMNEG00000044879	HNRNPK	100	100.000	Macaca_nemestrina
ENSCPOG00000005024	-	100	100.000	ENSMLEG00000041139	HNRNPK	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000005024	-	94	87.500	ENSMLEG00000039428	-	90	69.811	Mandrillus_leucophaeus
ENSCPOG00000005024	-	100	84.416	ENSMLEG00000041606	-	100	86.486	Mandrillus_leucophaeus
ENSCPOG00000005024	-	100	97.973	ENSMAUG00000015268	-	100	97.403	Mesocricetus_auratus
ENSCPOG00000005024	-	100	100.000	ENSMICG00000015780	HNRNPK	100	100.000	Microcebus_murinus
ENSCPOG00000005024	-	92	95.775	ENSMICG00000038026	-	99	86.598	Microcebus_murinus
ENSCPOG00000005024	-	94	91.667	ENSMICG00000038279	-	94	87.368	Microcebus_murinus
ENSCPOG00000005024	-	100	83.117	ENSMICG00000035603	-	87	83.117	Microcebus_murinus
ENSCPOG00000005024	-	94	98.611	ENSMOCG00000018755	-	71	92.473	Microtus_ochrogaster
ENSCPOG00000005024	-	100	98.701	ENSMOCG00000001446	-	100	98.701	Microtus_ochrogaster
ENSCPOG00000005024	-	100	100.000	MGP_CAROLIEiJ_G0018599	-	100	100.000	Mus_caroli
ENSCPOG00000005024	-	100	100.000	ENSMUSG00000021546	Hnrnpk	100	100.000	Mus_musculus
ENSCPOG00000005024	-	100	100.000	MGP_PahariEiJ_G0019663	Hnrnpk	100	100.000	Mus_pahari
ENSCPOG00000005024	-	100	100.000	MGP_SPRETEiJ_G0019479	Hnrnpk	100	100.000	Mus_spretus
ENSCPOG00000005024	-	94	95.833	ENSNGAG00000003234	-	70	97.647	Nannospalax_galili
ENSCPOG00000005024	-	100	97.973	ENSNGAG00000007861	Hnrnpk	100	97.403	Nannospalax_galili
ENSCPOG00000005024	-	97	84.828	ENSNBRG00000005627	hnrpkl	64	91.667	Neolamprologus_brichardi
ENSCPOG00000005024	-	94	88.889	ENSNLEG00000031448	-	100	88.462	Nomascus_leucogenys
ENSCPOG00000005024	-	100	80.769	ENSNLEG00000028579	-	76	83.333	Nomascus_leucogenys
ENSCPOG00000005024	-	100	100.000	ENSODEG00000005637	HNRNPK	100	100.000	Octodon_degus
ENSCPOG00000005024	-	100	93.506	ENSODEG00000005023	-	97	98.630	Octodon_degus
ENSCPOG00000005024	-	100	85.517	ENSORLG00000004704	hnrpkl	60	83.077	Oryzias_latipes
ENSCPOG00000005024	-	100	86.207	ENSORLG00020008118	hnrpkl	60	84.615	Oryzias_latipes_hni
ENSCPOG00000005024	-	100	86.207	ENSORLG00015015118	hnrpkl	60	84.615	Oryzias_latipes_hsok
ENSCPOG00000005024	-	100	86.897	ENSOMEG00000010595	hnrpkl	63	80.882	Oryzias_melastigma
ENSCPOG00000005024	-	100	88.312	ENSPPAG00000032080	-	100	91.892	Pan_paniscus
ENSCPOG00000005024	-	100	100.000	ENSPANG00000024881	HNRNPK	100	100.000	Papio_anubis
ENSCPOG00000005024	-	100	88.312	ENSPANG00000012070	-	100	90.541	Papio_anubis
ENSCPOG00000005024	-	100	98.701	ENSPEMG00000012825	Hnrnpk	100	98.701	Peromyscus_maniculatus_bairdii
ENSCPOG00000005024	-	100	100.000	ENSPCOG00000016433	HNRNPK	100	100.000	Propithecus_coquereli
ENSCPOG00000005024	-	98	80.282	ENSPNAG00000017193	hnrnpk	78	80.282	Pygocentrus_nattereri
ENSCPOG00000005024	-	94	91.667	ENSRBIG00000033695	-	76	86.957	Rhinopithecus_bieti
ENSCPOG00000005024	-	94	93.056	ENSRBIG00000035633	-	87	84.946	Rhinopithecus_bieti
ENSCPOG00000005024	-	94	90.278	ENSRROG00000005538	-	90	72.642	Rhinopithecus_roxellana
ENSCPOG00000005024	-	100	77.922	ENSRROG00000031863	-	92	82.192	Rhinopithecus_roxellana
ENSCPOG00000005024	-	94	93.056	ENSRROG00000001557	-	78	85.417	Rhinopithecus_roxellana