EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005047 (Gene tree)
Gene ID: 100734061
Gene Symbol: RAB30
Alias: -
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 82787 bases
Position: chrDS562895.1:10509070-10591856
Accession: 100734061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022880	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSCPOP00000025377	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039464	RAB30-201	812	XM_003468522	ENSCPOP00000022880	203 (aa)	XP_003468570	A0A286XIS3
ENSCPOT00000047568	RAB30-202	1355	XM_013151170	ENSCPOP00000025377	203 (aa)	XP_013006624	A0A286XIS3
ENSCPOT00000005101	RAB30-203	528	-	ENSCPOP00000004541	175 (aa)	-	H0V4J6

Gene Model

Click here to download ENSCPOG00000005047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005047	RAB30	85	45.930	ENSCPOG00000026575	RAB2B	81	48.718
ENSCPOG00000005047	RAB30	77	35.000	ENSCPOG00000001449	RAB34	62	35.000
ENSCPOG00000005047	RAB30	89	34.426	ENSCPOG00000000101	HRAS	94	34.426
ENSCPOG00000005047	RAB30	94	31.122	ENSCPOG00000039323	RAB24	96	32.653
ENSCPOG00000005047	RAB30	89	47.541	ENSCPOG00000011491	-	90	47.541
ENSCPOG00000005047	RAB30	88	38.043	ENSCPOG00000034570	RAB7A	88	38.043
ENSCPOG00000005047	RAB30	97	37.981	ENSCPOG00000037599	RAB11A	96	37.981
ENSCPOG00000005047	RAB30	79	33.333	ENSCPOG00000021833	Nras	90	34.483
ENSCPOG00000005047	RAB30	83	47.929	ENSCPOG00000032827	RAB18	82	47.929
ENSCPOG00000005047	RAB30	78	48.447	ENSCPOG00000039524	RAB39B	76	48.447
ENSCPOG00000005047	RAB30	89	38.122	ENSCPOG00000030218	RAB23	76	38.122
ENSCPOG00000005047	RAB30	75	32.278	ENSCPOG00000006843	DNAJC27	58	32.278
ENSCPOG00000005047	RAB30	97	40.191	ENSCPOG00000002472	RAB25	96	40.191
ENSCPOG00000005047	RAB30	82	31.737	ENSCPOG00000031743	RHEB	88	31.737
ENSCPOG00000005047	RAB30	87	32.584	ENSCPOG00000030290	KRAS	93	32.584
ENSCPOG00000005047	RAB30	97	40.000	ENSCPOG00000030154	RAB11B	96	40.000
ENSCPOG00000005047	RAB30	82	50.000	ENSCPOG00000014868	RAB1B	83	50.000
ENSCPOG00000005047	RAB30	81	33.735	ENSCPOG00000034906	MRAS	79	33.735
ENSCPOG00000005047	RAB30	81	48.235	ENSCPOG00000030742	RAB33B	74	48.235
ENSCPOG00000005047	RAB30	81	51.176	ENSCPOG00000000119	RAB33A	72	51.176
ENSCPOG00000005047	RAB30	80	41.718	ENSCPOG00000008172	RAB22A	84	41.718
ENSCPOG00000005047	RAB30	81	33.728	ENSCPOG00000000528	RERG	82	33.728
ENSCPOG00000005047	RAB30	95	37.879	ENSCPOG00000030676	RAB9A	97	37.879
ENSCPOG00000005047	RAB30	82	50.602	ENSCPOG00000015437	RAB1A	81	50.602
ENSCPOG00000005047	RAB30	96	44.670	ENSCPOG00000025645	RAB37	90	44.670
ENSCPOG00000005047	RAB30	86	34.463	ENSCPOG00000026899	-	76	34.463
ENSCPOG00000005047	RAB30	79	41.615	ENSCPOG00000038813	RAB6B	77	41.615
ENSCPOG00000005047	RAB30	89	40.556	ENSCPOG00000036631	RAB14	84	40.556
ENSCPOG00000005047	RAB30	89	47.802	ENSCPOG00000022689	RAB12	86	48.333
ENSCPOG00000005047	RAB30	83	42.857	ENSCPOG00000034818	RAB5B	78	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005047	RAB30	100	100.000	ENSG00000137502	RAB30	100	100.000	Homo_sapiens
ENSCPOG00000005047	RAB30	100	86.207	ENSAPOG00000022625	rab30	100	86.207	Acanthochromis_polyacanthus
ENSCPOG00000005047	RAB30	100	100.000	ENSAMEG00000005231	RAB30	100	100.000	Ailuropoda_melanoleuca
ENSCPOG00000005047	RAB30	95	86.010	ENSAOCG00000012556	rab30	69	86.010	Amphiprion_ocellaris
ENSCPOG00000005047	RAB30	100	86.207	ENSAPEG00000012044	rab30	100	86.207	Amphiprion_percula
ENSCPOG00000005047	RAB30	100	86.207	ENSATEG00000010475	rab30	100	86.207	Anabas_testudineus
ENSCPOG00000005047	RAB30	100	98.030	ENSACAG00000001098	RAB30	100	98.030	Anolis_carolinensis
ENSCPOG00000005047	RAB30	100	100.000	ENSANAG00000029292	RAB30	100	100.000	Aotus_nancymaae
ENSCPOG00000005047	RAB30	100	86.700	ENSACLG00000023526	rab30	100	86.700	Astatotilapia_calliptera
ENSCPOG00000005047	RAB30	100	85.222	ENSAMXG00000009935	rab30	82	85.222	Astyanax_mexicanus
ENSCPOG00000005047	RAB30	100	100.000	ENSBTAG00000002417	RAB30	100	100.000	Bos_taurus
ENSCPOG00000005047	RAB30	85	63.218	WBGene00004282	rab-30	81	63.218	Caenorhabditis_elegans
ENSCPOG00000005047	RAB30	100	100.000	ENSCJAG00000041773	RAB30	100	100.000	Callithrix_jacchus
ENSCPOG00000005047	RAB30	100	100.000	ENSCAFG00000004616	RAB30	100	100.000	Canis_familiaris
ENSCPOG00000005047	RAB30	100	100.000	ENSCAFG00020017865	RAB30	100	100.000	Canis_lupus_dingo
ENSCPOG00000005047	RAB30	100	100.000	ENSCHIG00000020601	RAB30	100	100.000	Capra_hircus
ENSCPOG00000005047	RAB30	100	100.000	ENSTSYG00000009392	RAB30	100	100.000	Carlito_syrichta
ENSCPOG00000005047	RAB30	100	100.000	ENSCAPG00000009331	RAB30	100	100.000	Cavia_aperea
ENSCPOG00000005047	RAB30	100	100.000	ENSCCAG00000026824	RAB30	100	100.000	Cebus_capucinus
ENSCPOG00000005047	RAB30	100	100.000	ENSCATG00000040441	RAB30	100	100.000	Cercocebus_atys
ENSCPOG00000005047	RAB30	100	100.000	ENSCLAG00000014030	RAB30	100	100.000	Chinchilla_lanigera
ENSCPOG00000005047	RAB30	100	100.000	ENSCSAG00000003704	RAB30	100	100.000	Chlorocebus_sabaeus
ENSCPOG00000005047	RAB30	100	97.537	ENSCPBG00000006855	RAB30	100	97.537	Chrysemys_picta_bellii
ENSCPOG00000005047	RAB30	100	99.507	ENSCANG00000022240	RAB30	100	99.507	Colobus_angolensis_palliatus
ENSCPOG00000005047	RAB30	100	100.000	ENSCGRG00001021787	Rab30	100	100.000	Cricetulus_griseus_chok1gshd
ENSCPOG00000005047	RAB30	100	100.000	ENSCGRG00000014842	Rab30	100	100.000	Cricetulus_griseus_crigri
ENSCPOG00000005047	RAB30	100	85.714	ENSCSEG00000007292	rab30	100	85.714	Cynoglossus_semilaevis
ENSCPOG00000005047	RAB30	100	85.222	ENSCVAG00000018085	rab30	100	85.222	Cyprinodon_variegatus
ENSCPOG00000005047	RAB30	99	85.572	ENSDARG00000037884	rab30	100	85.572	Danio_rerio
ENSCPOG00000005047	RAB30	100	100.000	ENSDNOG00000039115	RAB30	100	100.000	Dasypus_novemcinctus
ENSCPOG00000005047	RAB30	100	99.015	ENSDORG00000010504	-	100	99.015	Dipodomys_ordii
ENSCPOG00000005047	RAB30	100	97.044	ENSDORG00000015066	-	100	97.044	Dipodomys_ordii
ENSCPOG00000005047	RAB30	85	73.988	FBgn0031882	Rab30	87	67.692	Drosophila_melanogaster
ENSCPOG00000005047	RAB30	100	100.000	ENSEASG00005012754	RAB30	100	100.000	Equus_asinus_asinus
ENSCPOG00000005047	RAB30	100	100.000	ENSECAG00000022769	RAB30	100	100.000	Equus_caballus
ENSCPOG00000005047	RAB30	100	84.314	ENSELUG00000022997	rab30	100	85.149	Esox_lucius
ENSCPOG00000005047	RAB30	100	100.000	ENSFCAG00000014416	RAB30	100	100.000	Felis_catus
ENSCPOG00000005047	RAB30	100	98.522	ENSFALG00000007765	RAB30	100	98.522	Ficedula_albicollis
ENSCPOG00000005047	RAB30	100	100.000	ENSFDAG00000014521	RAB30	100	100.000	Fukomys_damarensis
ENSCPOG00000005047	RAB30	100	85.714	ENSFHEG00000013918	rab30	100	85.714	Fundulus_heteroclitus
ENSCPOG00000005047	RAB30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSCPOG00000005047	RAB30	100	98.522	ENSGALG00000017248	RAB30	100	98.522	Gallus_gallus
ENSCPOG00000005047	RAB30	100	85.222	ENSGAFG00000020309	rab30	100	85.222	Gambusia_affinis
ENSCPOG00000005047	RAB30	100	87.192	ENSGACG00000012006	rab30	100	87.192	Gasterosteus_aculeatus
ENSCPOG00000005047	RAB30	100	97.537	ENSGAGG00000004474	RAB30	100	97.537	Gopherus_agassizii
ENSCPOG00000005047	RAB30	100	100.000	ENSGGOG00000017157	RAB30	100	100.000	Gorilla_gorilla
ENSCPOG00000005047	RAB30	100	86.700	ENSHBUG00000000993	rab30	93	86.700	Haplochromis_burtoni
ENSCPOG00000005047	RAB30	100	100.000	ENSHGLG00000002759	RAB30	100	100.000	Heterocephalus_glaber_female
ENSCPOG00000005047	RAB30	100	100.000	ENSHGLG00100001213	RAB30	100	100.000	Heterocephalus_glaber_male
ENSCPOG00000005047	RAB30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSCPOG00000005047	RAB30	99	87.562	ENSIPUG00000021010	Rab30	100	87.562	Ictalurus_punctatus
ENSCPOG00000005047	RAB30	100	100.000	ENSSTOG00000020966	RAB30	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000005047	RAB30	100	100.000	ENSJJAG00000020064	Rab30	100	100.000	Jaculus_jaculus
ENSCPOG00000005047	RAB30	100	85.714	ENSKMAG00000004439	rab30	100	85.714	Kryptolebias_marmoratus
ENSCPOG00000005047	RAB30	100	86.207	ENSLBEG00000001146	rab30	100	86.207	Labrus_bergylta
ENSCPOG00000005047	RAB30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSCPOG00000005047	RAB30	100	89.163	ENSLOCG00000005884	rab30	100	89.163	Lepisosteus_oculatus
ENSCPOG00000005047	RAB30	100	99.507	ENSLAFG00000010711	RAB30	100	99.507	Loxodonta_africana
ENSCPOG00000005047	RAB30	100	100.000	ENSMFAG00000033119	RAB30	100	100.000	Macaca_fascicularis
ENSCPOG00000005047	RAB30	100	100.000	ENSMMUG00000007842	RAB30	100	100.000	Macaca_mulatta
ENSCPOG00000005047	RAB30	100	100.000	ENSMNEG00000037406	RAB30	100	100.000	Macaca_nemestrina
ENSCPOG00000005047	RAB30	100	100.000	ENSMLEG00000039496	RAB30	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000005047	RAB30	100	86.207	ENSMAMG00000011973	rab30	100	86.207	Mastacembelus_armatus
ENSCPOG00000005047	RAB30	100	86.700	ENSMZEG00005024032	rab30	93	86.700	Maylandia_zebra
ENSCPOG00000005047	RAB30	100	97.549	ENSMGAG00000015230	RAB30	100	97.549	Meleagris_gallopavo
ENSCPOG00000005047	RAB30	100	100.000	ENSMAUG00000008179	Rab30	100	100.000	Mesocricetus_auratus
ENSCPOG00000005047	RAB30	100	100.000	ENSMICG00000012002	RAB30	100	100.000	Microcebus_murinus
ENSCPOG00000005047	RAB30	100	100.000	ENSMOCG00000009821	-	100	100.000	Microtus_ochrogaster
ENSCPOG00000005047	RAB30	100	85.714	ENSMMOG00000000304	rab30	100	85.714	Mola_mola
ENSCPOG00000005047	RAB30	100	99.507	ENSMODG00000004506	RAB30	100	99.507	Monodelphis_domestica
ENSCPOG00000005047	RAB30	100	86.700	ENSMALG00000010438	rab30	100	86.700	Monopterus_albus
ENSCPOG00000005047	RAB30	100	99.507	MGP_CAROLIEiJ_G0029992	Rab30	100	99.507	Mus_caroli
ENSCPOG00000005047	RAB30	100	100.000	ENSMUSG00000030643	Rab30	100	100.000	Mus_musculus
ENSCPOG00000005047	RAB30	100	100.000	MGP_PahariEiJ_G0013212	Rab30	100	100.000	Mus_pahari
ENSCPOG00000005047	RAB30	100	100.000	MGP_SPRETEiJ_G0031102	Rab30	100	100.000	Mus_spretus
ENSCPOG00000005047	RAB30	100	100.000	ENSMPUG00000008088	RAB30	100	100.000	Mustela_putorius_furo
ENSCPOG00000005047	RAB30	100	98.522	ENSMLUG00000006552	RAB30	100	98.522	Myotis_lucifugus
ENSCPOG00000005047	RAB30	100	100.000	ENSNGAG00000018930	Rab30	100	100.000	Nannospalax_galili
ENSCPOG00000005047	RAB30	100	86.700	ENSNBRG00000002082	rab30	93	86.700	Neolamprologus_brichardi
ENSCPOG00000005047	RAB30	100	100.000	ENSNLEG00000029364	RAB30	100	100.000	Nomascus_leucogenys
ENSCPOG00000005047	RAB30	100	97.537	ENSMEUG00000012886	RAB30	100	97.537	Notamacropus_eugenii
ENSCPOG00000005047	RAB30	59	100.000	ENSOPRG00000007511	RAB30	100	100.000	Ochotona_princeps
ENSCPOG00000005047	RAB30	100	100.000	ENSODEG00000003833	RAB30	100	100.000	Octodon_degus
ENSCPOG00000005047	RAB30	100	86.700	ENSONIG00000005708	rab30	100	86.700	Oreochromis_niloticus
ENSCPOG00000005047	RAB30	100	100.000	ENSOCUG00000007580	RAB30	100	100.000	Oryctolagus_cuniculus
ENSCPOG00000005047	RAB30	100	85.714	ENSORLG00000029812	rab30	100	85.714	Oryzias_latipes
ENSCPOG00000005047	RAB30	100	85.714	ENSORLG00020015288	rab30	100	85.714	Oryzias_latipes_hni
ENSCPOG00000005047	RAB30	100	85.714	ENSORLG00015020972	rab30	100	85.714	Oryzias_latipes_hsok
ENSCPOG00000005047	RAB30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSCPOG00000005047	RAB30	100	100.000	ENSOGAG00000033189	RAB30	100	100.000	Otolemur_garnettii
ENSCPOG00000005047	RAB30	100	100.000	ENSOARG00000005688	RAB30	100	100.000	Ovis_aries
ENSCPOG00000005047	RAB30	100	100.000	ENSPPAG00000031604	RAB30	100	100.000	Pan_paniscus
ENSCPOG00000005047	RAB30	100	100.000	ENSPPRG00000023881	RAB30	100	100.000	Panthera_pardus
ENSCPOG00000005047	RAB30	100	100.000	ENSPTIG00000009836	RAB30	100	100.000	Panthera_tigris_altaica
ENSCPOG00000005047	RAB30	100	100.000	ENSPTRG00000004125	RAB30	100	100.000	Pan_troglodytes
ENSCPOG00000005047	RAB30	100	100.000	ENSPANG00000003974	RAB30	100	100.000	Papio_anubis
ENSCPOG00000005047	RAB30	99	88.614	ENSPKIG00000015202	rab30	99	88.614	Paramormyrops_kingsleyae
ENSCPOG00000005047	RAB30	100	96.552	ENSPSIG00000003078	RAB30	100	96.552	Pelodiscus_sinensis
ENSCPOG00000005047	RAB30	100	76.293	ENSPMGG00000016093	rab30	100	76.293	Periophthalmus_magnuspinnatus
ENSCPOG00000005047	RAB30	100	100.000	ENSPEMG00000023854	Rab30	100	100.000	Peromyscus_maniculatus_bairdii
ENSCPOG00000005047	RAB30	99	67.619	ENSPMAG00000006105	rab30	99	67.619	Petromyzon_marinus
ENSCPOG00000005047	RAB30	100	99.507	ENSPCIG00000027547	RAB30	94	99.507	Phascolarctos_cinereus
ENSCPOG00000005047	RAB30	100	85.714	ENSPFOG00000005479	rab30	100	85.714	Poecilia_formosa
ENSCPOG00000005047	RAB30	100	85.714	ENSPLAG00000015383	rab30	100	85.714	Poecilia_latipinna
ENSCPOG00000005047	RAB30	100	85.714	ENSPMEG00000009701	rab30	100	85.714	Poecilia_mexicana
ENSCPOG00000005047	RAB30	100	85.714	ENSPREG00000014634	rab30	100	85.714	Poecilia_reticulata
ENSCPOG00000005047	RAB30	100	100.000	ENSPPYG00000003733	RAB30	100	100.000	Pongo_abelii
ENSCPOG00000005047	RAB30	100	99.507	ENSPCAG00000000574	RAB30	100	99.507	Procavia_capensis
ENSCPOG00000005047	RAB30	100	100.000	ENSPCOG00000017316	RAB30	100	100.000	Propithecus_coquereli
ENSCPOG00000005047	RAB30	100	100.000	ENSPVAG00000005455	RAB30	100	100.000	Pteropus_vampyrus
ENSCPOG00000005047	RAB30	100	86.207	ENSPNYG00000009728	rab30	93	86.207	Pundamilia_nyererei
ENSCPOG00000005047	RAB30	99	87.065	ENSPNAG00000010760	rab30	100	87.065	Pygocentrus_nattereri
ENSCPOG00000005047	RAB30	100	100.000	ENSRNOG00000010224	Rab30	100	100.000	Rattus_norvegicus
ENSCPOG00000005047	RAB30	100	100.000	ENSRBIG00000039227	RAB30	100	100.000	Rhinopithecus_bieti
ENSCPOG00000005047	RAB30	100	100.000	ENSRROG00000031260	RAB30	100	100.000	Rhinopithecus_roxellana
ENSCPOG00000005047	RAB30	100	100.000	ENSSBOG00000026403	RAB30	100	100.000	Saimiri_boliviensis_boliviensis
ENSCPOG00000005047	RAB30	100	98.058	ENSSHAG00000018081	RAB30	100	98.058	Sarcophilus_harrisii
ENSCPOG00000005047	RAB30	100	85.714	ENSSMAG00000002500	rab30	100	85.714	Scophthalmus_maximus
ENSCPOG00000005047	RAB30	100	86.700	ENSSDUG00000013325	rab30	100	86.700	Seriola_dumerili
ENSCPOG00000005047	RAB30	100	86.700	ENSSLDG00000022533	rab30	100	86.700	Seriola_lalandi_dorsalis
ENSCPOG00000005047	RAB30	100	97.044	ENSSPUG00000006349	RAB30	100	97.044	Sphenodon_punctatus
ENSCPOG00000005047	RAB30	100	86.700	ENSSPAG00000013422	rab30	100	86.700	Stegastes_partitus
ENSCPOG00000005047	RAB30	100	100.000	ENSSSCG00000014900	RAB30	100	100.000	Sus_scrofa
ENSCPOG00000005047	RAB30	100	98.522	ENSTGUG00000012941	RAB30	100	98.522	Taeniopygia_guttata
ENSCPOG00000005047	RAB30	99	86.070	ENSTRUG00000022559	rab30	99	86.070	Takifugu_rubripes
ENSCPOG00000005047	RAB30	100	100.000	ENSTBEG00000009832	RAB30	100	100.000	Tupaia_belangeri
ENSCPOG00000005047	RAB30	100	100.000	ENSTTRG00000006100	RAB30	100	100.000	Tursiops_truncatus
ENSCPOG00000005047	RAB30	100	100.000	ENSUAMG00000009326	RAB30	100	100.000	Ursus_americanus
ENSCPOG00000005047	RAB30	100	100.000	ENSUMAG00000023572	RAB30	100	100.000	Ursus_maritimus
ENSCPOG00000005047	RAB30	100	100.000	ENSVVUG00000017471	RAB30	100	100.000	Vulpes_vulpes
ENSCPOG00000005047	RAB30	100	93.103	ENSXETG00000013633	rab30	100	93.103	Xenopus_tropicalis
ENSCPOG00000005047	RAB30	100	85.714	ENSXMAG00000025848	rab30	100	85.714	Xiphophorus_maculatus