EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005280 (Gene tree)
Gene ID: 100716402
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 63832 bases
Position: chrDS563092.1:400422-464253
Accession: 100716402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000004749	DRY_EERY	PF09750.9	1.4e-32	1	1
ENSCPOP00000026719	DRY_EERY	PF09750.9	1.5e-32	1	1
ENSCPOP00000004749	Surp	PF01805.20	3.3e-27	1	2
ENSCPOP00000004749	Surp	PF01805.20	3.3e-27	2	2
ENSCPOP00000026719	Surp	PF01805.20	3.8e-27	1	2
ENSCPOP00000026719	Surp	PF01805.20	3.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000005337	SFSWAP-202	3577	XM_003461154	ENSCPOP00000004749	949 (aa)	XP_003461202	H0V533
ENSCPOT00000030961	SFSWAP-201	3733	XM_003461155	ENSCPOP00000026719	1001 (aa)	XP_003461203	A0A286XN56

Gene Model

Click here to download ENSCPOG00000005280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005280	SFSWAP	100	89.076	ENSG00000061936	SFSWAP	100	89.542	Homo_sapiens
ENSCPOG00000005280	SFSWAP	72	60.452	ENSAPOG00000005784	sfswap	88	78.571	Acanthochromis_polyacanthus
ENSCPOG00000005280	SFSWAP	100	85.353	ENSAMEG00000013818	SFSWAP	100	84.826	Ailuropoda_melanoleuca
ENSCPOG00000005280	SFSWAP	70	61.404	ENSAOCG00000016469	sfswap	89	68.378	Amphiprion_ocellaris
ENSCPOG00000005280	SFSWAP	71	60.920	ENSAPEG00000004965	sfswap	89	68.378	Amphiprion_percula
ENSCPOG00000005280	SFSWAP	81	59.324	ENSATEG00000021053	sfswap	91	63.819	Anabas_testudineus
ENSCPOG00000005280	SFSWAP	100	90.842	ENSANAG00000001518	SFSWAP	100	90.211	Aotus_nancymaae
ENSCPOG00000005280	SFSWAP	73	59.116	ENSACLG00000020159	sfswap	93	65.365	Astatotilapia_calliptera
ENSCPOG00000005280	SFSWAP	100	88.830	ENSBTAG00000000439	SFSWAP	100	88.012	Bos_taurus
ENSCPOG00000005280	SFSWAP	100	90.727	ENSCJAG00000003613	SFSWAP	100	90.727	Callithrix_jacchus
ENSCPOG00000005280	SFSWAP	100	87.566	ENSCAFG00000006625	SFSWAP	100	85.564	Canis_familiaris
ENSCPOG00000005280	SFSWAP	81	87.500	ENSCAFG00020011254	SFSWAP	99	80.661	Canis_lupus_dingo
ENSCPOG00000005280	SFSWAP	100	88.303	ENSCHIG00000008838	SFSWAP	100	87.812	Capra_hircus
ENSCPOG00000005280	SFSWAP	100	89.779	ENSTSYG00000010303	SFSWAP	100	89.989	Carlito_syrichta
ENSCPOG00000005280	SFSWAP	92	99.544	ENSCAPG00000004394	SFSWAP	96	99.544	Cavia_aperea
ENSCPOG00000005280	SFSWAP	100	90.516	ENSCCAG00000037255	SFSWAP	100	90.516	Cebus_capucinus
ENSCPOG00000005280	SFSWAP	100	91.043	ENSCATG00000031094	SFSWAP	100	91.254	Cercocebus_atys
ENSCPOG00000005280	SFSWAP	100	96.628	ENSCLAG00000008380	SFSWAP	100	96.628	Chinchilla_lanigera
ENSCPOG00000005280	SFSWAP	100	91.043	ENSCSAG00000001884	SFSWAP	100	91.254	Chlorocebus_sabaeus
ENSCPOG00000005280	SFSWAP	92	73.834	ENSCHOG00000003578	SFSWAP	94	85.843	Choloepus_hoffmanni
ENSCPOG00000005280	SFSWAP	100	90.938	ENSCANG00000036501	SFSWAP	100	91.149	Colobus_angolensis_palliatus
ENSCPOG00000005280	SFSWAP	100	89.252	ENSCGRG00001011284	Sfswap	100	88.409	Cricetulus_griseus_chok1gshd
ENSCPOG00000005280	SFSWAP	100	89.252	ENSCGRG00000017417	Sfswap	100	88.409	Cricetulus_griseus_crigri
ENSCPOG00000005280	SFSWAP	55	53.167	ENSCVAG00000001205	-	70	53.097	Cyprinodon_variegatus
ENSCPOG00000005280	SFSWAP	99	55.368	ENSDARG00000005980	sfswap	50	53.096	Danio_rerio
ENSCPOG00000005280	SFSWAP	100	86.114	ENSDNOG00000018742	SFSWAP	100	84.232	Dasypus_novemcinctus
ENSCPOG00000005280	SFSWAP	90	93.382	ENSDORG00000010352	Sfswap	99	83.660	Dipodomys_ordii
ENSCPOG00000005280	SFSWAP	54	43.636	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSCPOG00000005280	SFSWAP	77	88.350	ENSETEG00000016657	-	86	91.262	Echinops_telfairi
ENSCPOG00000005280	SFSWAP	84	38.264	ENSEBUG00000016748	SFSWAP	93	42.088	Eptatretus_burgeri
ENSCPOG00000005280	SFSWAP	100	88.830	ENSEASG00005016502	SFSWAP	100	87.987	Equus_asinus_asinus
ENSCPOG00000005280	SFSWAP	100	87.612	ENSECAG00000007657	SFSWAP	100	87.512	Equus_caballus
ENSCPOG00000005280	SFSWAP	80	80.882	ENSEEUG00000001713	SFSWAP	94	74.590	Erinaceus_europaeus
ENSCPOG00000005280	SFSWAP	100	52.964	ENSELUG00000010942	sfswap	90	63.855	Esox_lucius
ENSCPOG00000005280	SFSWAP	100	88.198	ENSFCAG00000010778	SFSWAP	100	88.093	Felis_catus
ENSCPOG00000005280	SFSWAP	100	95.273	ENSFDAG00000017235	SFSWAP	100	94.433	Fukomys_damarensis
ENSCPOG00000005280	SFSWAP	56	69.767	ENSGMOG00000009205	sfswap	76	71.096	Gadus_morhua
ENSCPOG00000005280	SFSWAP	77	70.588	ENSGACG00000017647	sfswap	99	53.454	Gasterosteus_aculeatus
ENSCPOG00000005280	SFSWAP	100	90.336	ENSGGOG00000014877	SFSWAP	100	89.916	Gorilla_gorilla
ENSCPOG00000005280	SFSWAP	100	95.153	ENSHGLG00000019216	SFSWAP	100	95.258	Heterocephalus_glaber_female
ENSCPOG00000005280	SFSWAP	100	94.731	ENSHGLG00100019350	SFSWAP	100	94.837	Heterocephalus_glaber_male
ENSCPOG00000005280	SFSWAP	72	75.000	ENSHCOG00000009475	sfswap	97	50.916	Hippocampus_comes
ENSCPOG00000005280	SFSWAP	51	52.789	ENSIPUG00000010598	sfswap	62	65.842	Ictalurus_punctatus
ENSCPOG00000005280	SFSWAP	100	90.632	ENSSTOG00000000773	SFSWAP	100	90.211	Ictidomys_tridecemlineatus
ENSCPOG00000005280	SFSWAP	100	88.830	ENSJJAG00000006609	Sfswap	100	87.777	Jaculus_jaculus
ENSCPOG00000005280	SFSWAP	83	56.208	ENSKMAG00000013168	sfswap	65	63.683	Kryptolebias_marmoratus
ENSCPOG00000005280	SFSWAP	70	58.815	ENSLBEG00000010239	sfswap	71	60.234	Labrus_bergylta
ENSCPOG00000005280	SFSWAP	54	59.381	ENSLOCG00000006202	sfswap	99	60.278	Lepisosteus_oculatus
ENSCPOG00000005280	SFSWAP	92	85.438	ENSLAFG00000014462	SFSWAP	100	85.097	Loxodonta_africana
ENSCPOG00000005280	SFSWAP	100	89.510	ENSMFAG00000037352	SFSWAP	100	89.710	Macaca_fascicularis
ENSCPOG00000005280	SFSWAP	100	90.200	ENSMMUG00000020343	SFSWAP	100	90.938	Macaca_mulatta
ENSCPOG00000005280	SFSWAP	100	90.200	ENSMNEG00000041002	SFSWAP	100	90.938	Macaca_nemestrina
ENSCPOG00000005280	SFSWAP	100	88.936	ENSMLEG00000035728	SFSWAP	100	89.041	Mandrillus_leucophaeus
ENSCPOG00000005280	SFSWAP	73	58.162	ENSMZEG00005017834	SFSWAP	90	65.039	Maylandia_zebra
ENSCPOG00000005280	SFSWAP	100	90.632	ENSMICG00000004465	SFSWAP	100	90.316	Microcebus_murinus
ENSCPOG00000005280	SFSWAP	100	89.041	ENSMOCG00000014390	Sfswap	100	88.198	Microtus_ochrogaster
ENSCPOG00000005280	SFSWAP	71	60.653	ENSMALG00000012603	sfswap	91	63.728	Monopterus_albus
ENSCPOG00000005280	SFSWAP	100	88.303	MGP_CAROLIEiJ_G0027780	Sfswap	94	95.614	Mus_caroli
ENSCPOG00000005280	SFSWAP	100	88.409	ENSMUSG00000029439	Sfswap	94	95.614	Mus_musculus
ENSCPOG00000005280	SFSWAP	100	88.235	MGP_PahariEiJ_G0024360	Sfswap	94	96.491	Mus_pahari
ENSCPOG00000005280	SFSWAP	100	88.198	MGP_SPRETEiJ_G0028779	Sfswap	94	95.614	Mus_spretus
ENSCPOG00000005280	SFSWAP	100	87.355	ENSMPUG00000002218	SFSWAP	100	87.250	Mustela_putorius_furo
ENSCPOG00000005280	SFSWAP	90	81.333	ENSMLUG00000011296	SFSWAP	100	79.249	Myotis_lucifugus
ENSCPOG00000005280	SFSWAP	100	88.830	ENSNGAG00000018167	Sfswap	100	87.250	Nannospalax_galili
ENSCPOG00000005280	SFSWAP	100	88.842	ENSNLEG00000008386	SFSWAP	100	88.737	Nomascus_leucogenys
ENSCPOG00000005280	SFSWAP	71	87.319	ENSMEUG00000009556	-	79	87.319	Notamacropus_eugenii
ENSCPOG00000005280	SFSWAP	100	73.214	ENSOPRG00000006983	-	100	72.479	Ochotona_princeps
ENSCPOG00000005280	SFSWAP	100	94.521	ENSODEG00000008020	SFSWAP	100	95.364	Octodon_degus
ENSCPOG00000005280	SFSWAP	96	54.306	ENSONIG00000003757	sfswap	53	67.486	Oreochromis_niloticus
ENSCPOG00000005280	SFSWAP	51	79.755	ENSOANG00000013861	SFSWAP	100	82.139	Ornithorhynchus_anatinus
ENSCPOG00000005280	SFSWAP	100	86.260	ENSOCUG00000002165	SFSWAP	100	85.640	Oryctolagus_cuniculus
ENSCPOG00000005280	SFSWAP	89	90.094	ENSOGAG00000016724	SFSWAP	99	89.387	Otolemur_garnettii
ENSCPOG00000005280	SFSWAP	100	87.802	ENSOARG00000014314	SFSWAP	100	87.066	Ovis_aries
ENSCPOG00000005280	SFSWAP	100	90.231	ENSPPAG00000036706	SFSWAP	100	89.811	Pan_paniscus
ENSCPOG00000005280	SFSWAP	99	76.709	ENSPTIG00000004304	SFSWAP	97	88.000	Panthera_tigris_altaica
ENSCPOG00000005280	SFSWAP	100	90.336	ENSPTRG00000005640	SFSWAP	100	89.916	Pan_troglodytes
ENSCPOG00000005280	SFSWAP	100	91.043	ENSPANG00000019737	SFSWAP	100	91.254	Papio_anubis
ENSCPOG00000005280	SFSWAP	72	61.495	ENSPKIG00000008327	sfswap	51	46.154	Paramormyrops_kingsleyae
ENSCPOG00000005280	SFSWAP	63	72.956	ENSPSIG00000017807	SFSWAP	86	75.824	Pelodiscus_sinensis
ENSCPOG00000005280	SFSWAP	100	88.211	ENSPEMG00000001237	Sfswap	100	86.842	Peromyscus_maniculatus_bairdii
ENSCPOG00000005280	SFSWAP	97	78.982	ENSPCIG00000006062	SFSWAP	53	86.765	Phascolarctos_cinereus
ENSCPOG00000005280	SFSWAP	98	89.829	ENSPPYG00000005129	SFSWAP	100	89.293	Pongo_abelii
ENSCPOG00000005280	SFSWAP	58	84.720	ENSPCAG00000004977	-	65	85.106	Procavia_capensis
ENSCPOG00000005280	SFSWAP	100	89.357	ENSPCOG00000023786	SFSWAP	100	91.149	Propithecus_coquereli
ENSCPOG00000005280	SFSWAP	92	87.282	ENSPVAG00000014918	SFSWAP	92	87.282	Pteropus_vampyrus
ENSCPOG00000005280	SFSWAP	73	58.425	ENSPNYG00000012660	sfswap	80	64.781	Pundamilia_nyererei
ENSCPOG00000005280	SFSWAP	100	87.512	ENSRNOG00000000931	Sfswap	100	86.713	Rattus_norvegicus
ENSCPOG00000005280	SFSWAP	94	92.647	ENSRBIG00000036330	SFSWAP	100	84.194	Rhinopithecus_bieti
ENSCPOG00000005280	SFSWAP	100	90.516	ENSRROG00000032001	SFSWAP	100	90.727	Rhinopithecus_roxellana
ENSCPOG00000005280	SFSWAP	100	90.200	ENSSBOG00000026217	SFSWAP	100	90.635	Saimiri_boliviensis_boliviensis
ENSCPOG00000005280	SFSWAP	92	80.587	ENSSHAG00000014232	SFSWAP	56	80.847	Sarcophilus_harrisii
ENSCPOG00000005280	SFSWAP	96	57.098	ENSSFOG00015000766	sfswap	50	54.717	Scleropages_formosus
ENSCPOG00000005280	SFSWAP	78	60.057	ENSSMAG00000018718	sfswap	97	51.394	Scophthalmus_maximus
ENSCPOG00000005280	SFSWAP	71	61.918	ENSSLDG00000010835	sfswap	55	68.435	Seriola_lalandi_dorsalis
ENSCPOG00000005280	SFSWAP	79	85.437	ENSSARG00000000424	SFSWAP	85	85.437	Sorex_araneus
ENSCPOG00000005280	SFSWAP	87	74.163	ENSSPUG00000010272	SFSWAP	60	76.152	Sphenodon_punctatus
ENSCPOG00000005280	SFSWAP	71	59.830	ENSSPAG00000014310	sfswap	78	68.022	Stegastes_partitus
ENSCPOG00000005280	SFSWAP	100	88.854	ENSSSCG00000009744	SFSWAP	100	87.592	Sus_scrofa
ENSCPOG00000005280	SFSWAP	54	90.625	ENSTBEG00000004983	-	64	90.625	Tupaia_belangeri
ENSCPOG00000005280	SFSWAP	100	78.676	ENSTTRG00000013478	SFSWAP	93	90.909	Tursiops_truncatus
ENSCPOG00000005280	SFSWAP	100	85.564	ENSUAMG00000016807	SFSWAP	100	86.196	Ursus_americanus
ENSCPOG00000005280	SFSWAP	90	81.520	ENSUMAG00000002957	SFSWAP	91	80.096	Ursus_maritimus
ENSCPOG00000005280	SFSWAP	56	92.248	ENSVPAG00000010479	-	51	93.878	Vicugna_pacos
ENSCPOG00000005280	SFSWAP	100	87.777	ENSVVUG00000010753	SFSWAP	100	85.774	Vulpes_vulpes
ENSCPOG00000005280	SFSWAP	97	61.345	ENSXETG00000009350	sfswap	98	61.212	Xenopus_tropicalis