EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005475 (Gene tree)
Gene ID: 100722639
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 172584 bases
Position: chrDS562876.1:17653054-17825637
Accession: 100722639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026653	ResIII	PF04851.15	1.9e-08	1	1
ENSCPOP00000022278	ResIII	PF04851.15	1.9e-08	1	1
ENSCPOP00000025379	ResIII	PF04851.15	1.9e-08	1	1
ENSCPOP00000004930	ResIII	PF04851.15	1.9e-08	1	1
ENSCPOP00000025379	BRK	PF07533.16	2.1e-17	1	1
ENSCPOP00000004930	BRK	PF07533.16	2.2e-17	1	1
ENSCPOP00000026653	BRK	PF07533.16	2.2e-17	1	1
ENSCPOP00000022278	BRK	PF07533.16	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000040482	SMARCA2-205	783	-	ENSCPOP00000027810	260 (aa)	-	A0A286XQN8
ENSCPOT00000045532	SMARCA2-202	6079	XM_003472196	ENSCPOP00000026653	1568 (aa)	XP_003472244	A0A286XME8
ENSCPOT00000038325	SMARCA2-201	7250	XM_013155036	ENSCPOP00000025379	1579 (aa)	XP_013010490	A0A286XIV0
ENSCPOT00000047297	SMARCA2-208	204	-	ENSCPOP00000024626	68 (aa)	-	A0A286XGY9
ENSCPOT00000047604	SMARCA2-206	4740	-	ENSCPOP00000022278	1579 (aa)	-	A0A286XA37
ENSCPOT00000035301	SMARCA2-204	837	-	ENSCPOP00000030417	278 (aa)	-	A0A286XXX1
ENSCPOT00000005534	SMARCA2-207	4767	-	ENSCPOP00000004930	1588 (aa)	-	H0V5J7
ENSCPOT00000041426	SMARCA2-203	1961	XM_005004718	ENSCPOP00000032048	276 (aa)	XP_005004775	A0A286Y2V6

Gene Model

Click here to download ENSCPOG00000005475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005475	SMARCA2	93	78.401	ENSCPOG00000015549	SMARCA4	93	76.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005475	SMARCA2	100	97.203	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSCPOG00000005475	SMARCA2	100	80.779	ENSAPOG00000002641	SMARCA2	97	79.508	Acanthochromis_polyacanthus
ENSCPOG00000005475	SMARCA2	80	99.134	ENSAMEG00000012325	SMARCA2	99	99.134	Ailuropoda_melanoleuca
ENSCPOG00000005475	SMARCA2	100	79.535	ENSACIG00000015607	SMARCA2	97	79.637	Amphilophus_citrinellus
ENSCPOG00000005475	SMARCA2	100	80.678	ENSAOCG00000009647	-	97	80.363	Amphiprion_ocellaris
ENSCPOG00000005475	SMARCA2	100	80.653	ENSAPEG00000007646	SMARCA2	97	80.337	Amphiprion_percula
ENSCPOG00000005475	SMARCA2	99	80.955	ENSATEG00000006916	SMARCA2	97	79.758	Anabas_testudineus
ENSCPOG00000005475	SMARCA2	89	89.936	ENSAPLG00000013873	SMARCA2	94	88.773	Anas_platyrhynchos
ENSCPOG00000005475	SMARCA2	100	90.134	ENSACAG00000002423	SMARCA2	100	89.547	Anolis_carolinensis
ENSCPOG00000005475	SMARCA2	100	97.261	ENSANAG00000026498	SMARCA2	100	97.261	Aotus_nancymaae
ENSCPOG00000005475	SMARCA2	100	80.835	ENSACLG00000004248	SMARCA2	97	80.915	Astatotilapia_calliptera
ENSCPOG00000005475	SMARCA2	100	82.305	ENSAMXG00000012404	smarca2	97	82.770	Astyanax_mexicanus
ENSCPOG00000005475	SMARCA2	100	96.688	ENSBTAG00000007494	SMARCA2	100	96.688	Bos_taurus
ENSCPOG00000005475	SMARCA2	99	97.439	ENSCJAG00000010710	SMARCA2	99	97.220	Callithrix_jacchus
ENSCPOG00000005475	SMARCA2	100	96.752	ENSCAFG00000002013	SMARCA2	100	96.752	Canis_familiaris
ENSCPOG00000005475	SMARCA2	77	94.741	ENSCAFG00020026802	SMARCA2	98	94.741	Canis_lupus_dingo
ENSCPOG00000005475	SMARCA2	100	96.688	ENSCHIG00000025863	SMARCA2	100	96.688	Capra_hircus
ENSCPOG00000005475	SMARCA2	100	95.609	ENSTSYG00000003858	SMARCA2	100	96.273	Carlito_syrichta
ENSCPOG00000005475	SMARCA2	100	96.662	ENSCAPG00000002890	SMARCA2	100	96.662	Cavia_aperea
ENSCPOG00000005475	SMARCA2	100	97.454	ENSCCAG00000030636	SMARCA2	100	97.454	Cebus_capucinus
ENSCPOG00000005475	SMARCA2	100	96.565	ENSCATG00000031470	SMARCA2	100	96.372	Cercocebus_atys
ENSCPOG00000005475	SMARCA2	100	98.158	ENSCLAG00000014484	SMARCA2	100	98.158	Chinchilla_lanigera
ENSCPOG00000005475	SMARCA2	93	96.873	ENSCSAG00000008650	SMARCA2	99	96.873	Chlorocebus_sabaeus
ENSCPOG00000005475	SMARCA2	87	90.909	ENSCHOG00000004316	SMARCA2	87	90.909	Choloepus_hoffmanni
ENSCPOG00000005475	SMARCA2	100	90.886	ENSCPBG00000025463	SMARCA2	100	91.672	Chrysemys_picta_bellii
ENSCPOG00000005475	SMARCA2	100	97.328	ENSCANG00000039597	SMARCA2	100	97.328	Colobus_angolensis_palliatus
ENSCPOG00000005475	SMARCA2	100	89.433	ENSCGRG00001002323	Smarca2	100	89.504	Cricetulus_griseus_chok1gshd
ENSCPOG00000005475	SMARCA2	99	77.430	ENSCSEG00000019311	SMARCA2	97	77.474	Cynoglossus_semilaevis
ENSCPOG00000005475	SMARCA2	84	79.851	ENSCVAG00000016571	SMARCA2	75	85.965	Cyprinodon_variegatus
ENSCPOG00000005475	SMARCA2	100	82.249	ENSDARG00000008904	smarca2	97	82.311	Danio_rerio
ENSCPOG00000005475	SMARCA2	100	95.151	ENSDNOG00000006402	SMARCA2	100	95.151	Dasypus_novemcinctus
ENSCPOG00000005475	SMARCA2	100	97.072	ENSDORG00000014832	Smarca2	100	97.072	Dipodomys_ordii
ENSCPOG00000005475	SMARCA2	81	60.078	FBgn0000212	brm	71	62.773	Drosophila_melanogaster
ENSCPOG00000005475	SMARCA2	86	62.410	ENSEBUG00000002449	-	84	68.408	Eptatretus_burgeri
ENSCPOG00000005475	SMARCA2	94	71.123	ENSEBUG00000011442	-	97	69.913	Eptatretus_burgeri
ENSCPOG00000005475	SMARCA2	100	96.943	ENSEASG00005010312	SMARCA2	100	96.943	Equus_asinus_asinus
ENSCPOG00000005475	SMARCA2	67	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSCPOG00000005475	SMARCA2	92	81.127	ENSELUG00000010318	smarca2	96	78.893	Esox_lucius
ENSCPOG00000005475	SMARCA2	100	95.669	ENSFCAG00000001568	SMARCA2	100	95.796	Felis_catus
ENSCPOG00000005475	SMARCA2	100	89.021	ENSFALG00000010416	SMARCA2	100	90.872	Ficedula_albicollis
ENSCPOG00000005475	SMARCA2	99	96.392	ENSFDAG00000010502	SMARCA2	99	96.392	Fukomys_damarensis
ENSCPOG00000005475	SMARCA2	100	80.562	ENSFHEG00000021250	SMARCA2	97	80.309	Fundulus_heteroclitus
ENSCPOG00000005475	SMARCA2	98	78.058	ENSGMOG00000014229	SMARCA2	97	77.900	Gadus_morhua
ENSCPOG00000005475	SMARCA2	100	92.254	ENSGALG00000010164	SMARCA2	100	91.608	Gallus_gallus
ENSCPOG00000005475	SMARCA2	95	76.846	ENSGAFG00000001164	SMARCA2	93	76.459	Gambusia_affinis
ENSCPOG00000005475	SMARCA2	99	79.554	ENSGACG00000014488	SMARCA2	97	78.862	Gasterosteus_aculeatus
ENSCPOG00000005475	SMARCA2	100	91.545	ENSGAGG00000024412	SMARCA2	100	91.799	Gopherus_agassizii
ENSCPOG00000005475	SMARCA2	100	93.048	ENSGGOG00000000513	SMARCA2	85	97.233	Gorilla_gorilla
ENSCPOG00000005475	SMARCA2	100	80.326	ENSHBUG00000006691	SMARCA2	96	80.691	Haplochromis_burtoni
ENSCPOG00000005475	SMARCA2	99	96.964	ENSHGLG00000005215	SMARCA2	99	97.059	Heterocephalus_glaber_female
ENSCPOG00000005475	SMARCA2	100	96.877	ENSHGLG00100010496	SMARCA2	100	96.877	Heterocephalus_glaber_male
ENSCPOG00000005475	SMARCA2	89	75.142	ENSHCOG00000015348	-	88	86.746	Hippocampus_comes
ENSCPOG00000005475	SMARCA2	100	80.683	ENSIPUG00000011060	smarca2	97	81.671	Ictalurus_punctatus
ENSCPOG00000005475	SMARCA2	100	97.586	ENSSTOG00000006812	SMARCA2	100	97.586	Ictidomys_tridecemlineatus
ENSCPOG00000005475	SMARCA2	100	96.435	ENSJJAG00000010867	Smarca2	100	96.563	Jaculus_jaculus
ENSCPOG00000005475	SMARCA2	100	79.876	ENSKMAG00000015844	-	98	79.606	Kryptolebias_marmoratus
ENSCPOG00000005475	SMARCA2	98	83.803	ENSLOCG00000011499	smarca2	82	88.508	Lepisosteus_oculatus
ENSCPOG00000005475	SMARCA2	99	93.397	ENSLAFG00000014061	SMARCA2	83	97.563	Loxodonta_africana
ENSCPOG00000005475	SMARCA2	100	96.178	ENSMFAG00000003814	SMARCA2	100	96.178	Macaca_fascicularis
ENSCPOG00000005475	SMARCA2	100	97.265	ENSMMUG00000015279	SMARCA2	100	97.265	Macaca_mulatta
ENSCPOG00000005475	SMARCA2	100	96.887	ENSMNEG00000041069	SMARCA2	100	96.887	Macaca_nemestrina
ENSCPOG00000005475	SMARCA2	100	95.032	ENSMLEG00000027418	SMARCA2	100	95.032	Mandrillus_leucophaeus
ENSCPOG00000005475	SMARCA2	100	80.846	ENSMAMG00000003056	SMARCA2	97	81.752	Mastacembelus_armatus
ENSCPOG00000005475	SMARCA2	100	80.528	ENSMZEG00005020709	SMARCA2	97	80.467	Maylandia_zebra
ENSCPOG00000005475	SMARCA2	77	77.822	ENSMGAG00000005160	-	100	77.689	Meleagris_gallopavo
ENSCPOG00000005475	SMARCA2	100	97.134	ENSMICG00000005162	SMARCA2	100	97.134	Microcebus_murinus
ENSCPOG00000005475	SMARCA2	100	96.565	ENSMOCG00000001611	Smarca2	100	96.565	Microtus_ochrogaster
ENSCPOG00000005475	SMARCA2	99	79.140	ENSMMOG00000014196	SMARCA2	97	79.150	Mola_mola
ENSCPOG00000005475	SMARCA2	100	92.130	ENSMODG00000003578	SMARCA2	100	92.067	Monodelphis_domestica
ENSCPOG00000005475	SMARCA2	99	80.784	ENSMALG00000009611	SMARCA2	97	80.366	Monopterus_albus
ENSCPOG00000005475	SMARCA2	100	95.896	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.896	Mus_caroli
ENSCPOG00000005475	SMARCA2	100	95.831	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSCPOG00000005475	SMARCA2	100	96.137	MGP_PahariEiJ_G0014334	Smarca2	100	96.137	Mus_pahari
ENSCPOG00000005475	SMARCA2	100	95.707	MGP_SPRETEiJ_G0023759	Smarca2	100	95.707	Mus_spretus
ENSCPOG00000005475	SMARCA2	80	98.978	ENSMPUG00000005171	SMARCA2	94	98.978	Mustela_putorius_furo
ENSCPOG00000005475	SMARCA2	99	90.144	ENSMLUG00000002342	SMARCA2	83	93.237	Myotis_lucifugus
ENSCPOG00000005475	SMARCA2	99	95.644	ENSNGAG00000000108	Smarca2	99	95.518	Nannospalax_galili
ENSCPOG00000005475	SMARCA2	95	67.968	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSCPOG00000005475	SMARCA2	100	94.707	ENSNLEG00000008575	SMARCA2	100	94.707	Nomascus_leucogenys
ENSCPOG00000005475	SMARCA2	100	85.624	ENSMEUG00000009812	SMARCA2	100	85.561	Notamacropus_eugenii
ENSCPOG00000005475	SMARCA2	100	90.690	ENSOPRG00000013474	SMARCA2	100	90.880	Ochotona_princeps
ENSCPOG00000005475	SMARCA2	99	96.985	ENSODEG00000005452	SMARCA2	99	96.985	Octodon_degus
ENSCPOG00000005475	SMARCA2	99	80.706	ENSONIG00000014163	SMARCA2	98	79.643	Oreochromis_niloticus
ENSCPOG00000005475	SMARCA2	100	95.570	ENSOCUG00000006320	SMARCA2	100	96.205	Oryctolagus_cuniculus
ENSCPOG00000005475	SMARCA2	100	80.100	ENSORLG00000020820	SMARCA2	97	80.013	Oryzias_latipes
ENSCPOG00000005475	SMARCA2	100	80.176	ENSORLG00015006289	SMARCA2	97	80.299	Oryzias_latipes_hsok
ENSCPOG00000005475	SMARCA2	99	80.989	ENSOMEG00000009736	-	97	81.123	Oryzias_melastigma
ENSCPOG00000005475	SMARCA2	99	93.723	ENSOGAG00000017053	SMARCA2	99	93.723	Otolemur_garnettii
ENSCPOG00000005475	SMARCA2	100	95.038	ENSOARG00000013265	SMARCA2	100	95.038	Ovis_aries
ENSCPOG00000005475	SMARCA2	100	93.367	ENSPPAG00000038717	SMARCA2	100	93.342	Pan_paniscus
ENSCPOG00000005475	SMARCA2	100	95.732	ENSPPRG00000001879	SMARCA2	100	95.860	Panthera_pardus
ENSCPOG00000005475	SMARCA2	100	94.981	ENSPTRG00000051168	SMARCA2	100	95.550	Pan_troglodytes
ENSCPOG00000005475	SMARCA2	100	90.286	ENSPANG00000025121	SMARCA2	100	90.159	Papio_anubis
ENSCPOG00000005475	SMARCA2	100	82.664	ENSPKIG00000018469	-	97	82.411	Paramormyrops_kingsleyae
ENSCPOG00000005475	SMARCA2	100	90.811	ENSPSIG00000006284	SMARCA2	100	90.915	Pelodiscus_sinensis
ENSCPOG00000005475	SMARCA2	99	74.356	ENSPMGG00000013696	-	98	74.632	Periophthalmus_magnuspinnatus
ENSCPOG00000005475	SMARCA2	100	95.743	ENSPEMG00000019821	Smarca2	100	95.743	Peromyscus_maniculatus_bairdii
ENSCPOG00000005475	SMARCA2	94	73.389	ENSPMAG00000005337	-	80	78.193	Petromyzon_marinus
ENSCPOG00000005475	SMARCA2	100	93.878	ENSPCIG00000015658	SMARCA2	100	93.814	Phascolarctos_cinereus
ENSCPOG00000005475	SMARCA2	100	79.900	ENSPFOG00000001856	SMARCA2	97	78.937	Poecilia_formosa
ENSCPOG00000005475	SMARCA2	99	79.723	ENSPLAG00000017829	SMARCA2	82	81.245	Poecilia_latipinna
ENSCPOG00000005475	SMARCA2	99	79.773	ENSPMEG00000001815	-	97	76.585	Poecilia_mexicana
ENSCPOG00000005475	SMARCA2	100	79.392	ENSPREG00000013800	SMARCA2	96	77.527	Poecilia_reticulata
ENSCPOG00000005475	SMARCA2	100	96.369	ENSPPYG00000019258	SMARCA2	100	96.369	Pongo_abelii
ENSCPOG00000005475	SMARCA2	76	84.097	ENSPCAG00000016969	SMARCA2	78	84.635	Procavia_capensis
ENSCPOG00000005475	SMARCA2	100	94.908	ENSPCOG00000025709	SMARCA2	100	94.968	Propithecus_coquereli
ENSCPOG00000005475	SMARCA2	91	98.276	ENSPVAG00000000901	SMARCA2	95	97.802	Pteropus_vampyrus
ENSCPOG00000005475	SMARCA2	100	77.204	ENSPNYG00000004533	SMARCA2	97	76.773	Pundamilia_nyererei
ENSCPOG00000005475	SMARCA2	99	82.803	ENSPNAG00000014635	smarca2	96	83.279	Pygocentrus_nattereri
ENSCPOG00000005475	SMARCA2	100	94.803	ENSRNOG00000011931	Smarca2	100	94.803	Rattus_norvegicus
ENSCPOG00000005475	SMARCA2	100	95.669	ENSRBIG00000038618	SMARCA2	100	95.669	Rhinopithecus_bieti
ENSCPOG00000005475	SMARCA2	100	96.203	ENSRROG00000019271	SMARCA2	100	96.203	Rhinopithecus_roxellana
ENSCPOG00000005475	SMARCA2	100	94.114	ENSSBOG00000034827	SMARCA2	100	94.114	Saimiri_boliviensis_boliviensis
ENSCPOG00000005475	SMARCA2	100	91.818	ENSSHAG00000007884	SMARCA2	100	91.630	Sarcophilus_harrisii
ENSCPOG00000005475	SMARCA2	91	83.812	ENSSFOG00015014870	SMARCA2	94	84.245	Scleropages_formosus
ENSCPOG00000005475	SMARCA2	100	80.653	ENSSMAG00000013707	SMARCA2	97	80.727	Scophthalmus_maximus
ENSCPOG00000005475	SMARCA2	99	80.536	ENSSDUG00000008852	-	97	79.974	Seriola_dumerili
ENSCPOG00000005475	SMARCA2	99	80.804	ENSSLDG00000025449	SMARCA2	97	79.832	Seriola_lalandi_dorsalis
ENSCPOG00000005475	SMARCA2	95	97.126	ENSSARG00000007888	SMARCA2	95	96.154	Sorex_araneus
ENSCPOG00000005475	SMARCA2	98	84.130	ENSSPUG00000001629	SMARCA2	98	87.450	Sphenodon_punctatus
ENSCPOG00000005475	SMARCA2	100	80.827	ENSSPAG00000020091	-	97	80.777	Stegastes_partitus
ENSCPOG00000005475	SMARCA2	100	96.376	ENSSSCG00000005232	SMARCA2	100	96.376	Sus_scrofa
ENSCPOG00000005475	SMARCA2	98	88.811	ENSTGUG00000005460	SMARCA2	98	90.147	Taeniopygia_guttata
ENSCPOG00000005475	SMARCA2	99	79.393	ENSTRUG00000015619	SMARCA2	97	79.028	Takifugu_rubripes
ENSCPOG00000005475	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSCPOG00000005475	SMARCA2	95	95.349	ENSTTRG00000002033	SMARCA2	95	95.282	Tursiops_truncatus
ENSCPOG00000005475	SMARCA2	89	94.194	ENSUAMG00000024701	SMARCA2	99	94.126	Ursus_americanus
ENSCPOG00000005475	SMARCA2	91	87.956	ENSVPAG00000001204	SMARCA2	99	87.956	Vicugna_pacos
ENSCPOG00000005475	SMARCA2	76	95.746	ENSVVUG00000004598	SMARCA2	99	95.746	Vulpes_vulpes
ENSCPOG00000005475	SMARCA2	100	82.898	ENSXETG00000015299	smarca2	81	88.420	Xenopus_tropicalis
ENSCPOG00000005475	SMARCA2	89	79.520	ENSXCOG00000011073	SMARCA2	97	79.263	Xiphophorus_couchianus
ENSCPOG00000005475	SMARCA2	100	79.120	ENSXMAG00000015611	SMARCA2	97	78.964	Xiphophorus_maculatus