EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005545 (Gene tree)
Gene ID: 100734217
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 79421 bases
Position: chrDS562947.1:5602936-5682356
Accession: 100734217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000004993	Suf	PF05843.14	2.2e-84	1	1
ENSCPOP00000031505	Suf	PF05843.14	2.4e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035292	CSTF3-201	2154	XM_003463865	ENSCPOP00000031505	717 (aa)	XP_003463913	A0A286Y1T4
ENSCPOT00000005604	CSTF3-202	2142	XM_013145965	ENSCPOP00000004993	713 (aa)	-	H0V5Q0

Gene Model

Click here to download ENSCPOG00000005545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005545	CSTF3	100	99.582	ENSG00000176102	CSTF3	100	99.582	Homo_sapiens
ENSCPOG00000005545	CSTF3	100	91.457	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSCPOG00000005545	CSTF3	99	99.577	ENSAMEG00000007187	CSTF3	98	99.577	Ailuropoda_melanoleuca
ENSCPOG00000005545	CSTF3	88	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSCPOG00000005545	CSTF3	100	91.317	ENSAOCG00000010930	cstf3	100	91.226	Amphiprion_ocellaris
ENSCPOG00000005545	CSTF3	100	91.317	ENSAPEG00000007903	cstf3	100	91.226	Amphiprion_percula
ENSCPOG00000005545	CSTF3	100	91.226	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSCPOG00000005545	CSTF3	99	97.881	ENSAPLG00000007217	CSTF3	100	97.881	Anas_platyrhynchos
ENSCPOG00000005545	CSTF3	100	95.543	ENSACAG00000002823	CSTF3	100	95.543	Anolis_carolinensis
ENSCPOG00000005545	CSTF3	100	99.582	ENSANAG00000020699	CSTF3	100	99.680	Aotus_nancymaae
ENSCPOG00000005545	CSTF3	99	91.773	ENSACLG00000007820	cstf3	100	91.226	Astatotilapia_calliptera
ENSCPOG00000005545	CSTF3	100	90.756	ENSAMXG00000014198	cstf3	100	90.808	Astyanax_mexicanus
ENSCPOG00000005545	CSTF3	100	99.582	ENSBTAG00000008617	CSTF3	100	99.703	Bos_taurus
ENSCPOG00000005545	CSTF3	98	49.185	WBGene00006307	suf-1	99	49.185	Caenorhabditis_elegans
ENSCPOG00000005545	CSTF3	100	99.582	ENSCJAG00000005533	CSTF3	100	99.680	Callithrix_jacchus
ENSCPOG00000005545	CSTF3	100	99.582	ENSCAFG00000007264	CSTF3	100	99.582	Canis_familiaris
ENSCPOG00000005545	CSTF3	99	99.718	ENSCAFG00020002715	CSTF3	99	99.718	Canis_lupus_dingo
ENSCPOG00000005545	CSTF3	99	98.151	ENSCHIG00000016418	CSTF3	100	99.680	Capra_hircus
ENSCPOG00000005545	CSTF3	99	99.295	ENSTSYG00000000451	CSTF3	100	99.295	Carlito_syrichta
ENSCPOG00000005545	CSTF3	84	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSCPOG00000005545	CSTF3	100	99.582	ENSCCAG00000024790	CSTF3	100	99.680	Cebus_capucinus
ENSCPOG00000005545	CSTF3	100	99.582	ENSCATG00000007080	CSTF3	100	99.680	Cercocebus_atys
ENSCPOG00000005545	CSTF3	100	99.582	ENSCLAG00000016179	CSTF3	100	99.582	Chinchilla_lanigera
ENSCPOG00000005545	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSCPOG00000005545	CSTF3	100	97.616	ENSCPBG00000006753	CSTF3	100	97.493	Chrysemys_picta_bellii
ENSCPOG00000005545	CSTF3	99	62.238	ENSCING00000006401	-	98	62.238	Ciona_intestinalis
ENSCPOG00000005545	CSTF3	99	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSCPOG00000005545	CSTF3	100	99.582	ENSCANG00000035468	CSTF3	100	99.680	Colobus_angolensis_palliatus
ENSCPOG00000005545	CSTF3	100	99.163	ENSCGRG00001014773	Cstf3	100	99.163	Cricetulus_griseus_chok1gshd
ENSCPOG00000005545	CSTF3	100	99.163	ENSCGRG00000004142	Cstf3	100	99.163	Cricetulus_griseus_crigri
ENSCPOG00000005545	CSTF3	100	91.304	ENSCSEG00000014283	cstf3	100	91.213	Cynoglossus_semilaevis
ENSCPOG00000005545	CSTF3	100	90.476	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSCPOG00000005545	CSTF3	100	91.074	ENSDARG00000018904	cstf3	100	91.074	Danio_rerio
ENSCPOG00000005545	CSTF3	99	99.294	ENSDNOG00000007366	CSTF3	99	99.294	Dasypus_novemcinctus
ENSCPOG00000005545	CSTF3	99	91.831	ENSDORG00000005898	Cstf3	99	91.831	Dipodomys_ordii
ENSCPOG00000005545	CSTF3	99	57.280	FBgn0003559	su(f)	98	57.280	Drosophila_melanogaster
ENSCPOG00000005545	CSTF3	90	93.925	ENSETEG00000017097	CSTF3	90	93.925	Echinops_telfairi
ENSCPOG00000005545	CSTF3	85	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSCPOG00000005545	CSTF3	98	99.571	ENSEASG00005019884	CSTF3	100	99.571	Equus_asinus_asinus
ENSCPOG00000005545	CSTF3	98	99.571	ENSECAG00000023338	CSTF3	100	99.571	Equus_caballus
ENSCPOG00000005545	CSTF3	100	94.003	ENSEEUG00000015167	CSTF3	100	94.003	Erinaceus_europaeus
ENSCPOG00000005545	CSTF3	100	89.762	ENSELUG00000023393	cstf3	100	89.679	Esox_lucius
ENSCPOG00000005545	CSTF3	100	99.442	ENSFCAG00000030711	CSTF3	100	99.442	Felis_catus
ENSCPOG00000005545	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSCPOG00000005545	CSTF3	100	99.442	ENSFDAG00000012082	CSTF3	100	99.442	Fukomys_damarensis
ENSCPOG00000005545	CSTF3	100	90.529	ENSFHEG00000020623	cstf3	100	90.529	Fundulus_heteroclitus
ENSCPOG00000005545	CSTF3	100	89.510	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSCPOG00000005545	CSTF3	100	97.896	ENSGALG00000011685	CSTF3	100	97.772	Gallus_gallus
ENSCPOG00000005545	CSTF3	100	90.808	ENSGAFG00000002181	cstf3	100	90.808	Gambusia_affinis
ENSCPOG00000005545	CSTF3	100	90.756	ENSGACG00000015997	cstf3	100	90.529	Gasterosteus_aculeatus
ENSCPOG00000005545	CSTF3	100	97.616	ENSGAGG00000006200	CSTF3	100	97.354	Gopherus_agassizii
ENSCPOG00000005545	CSTF3	99	93.794	ENSGGOG00000026591	CSTF3	99	93.794	Gorilla_gorilla
ENSCPOG00000005545	CSTF3	99	91.773	ENSHBUG00000016656	cstf3	100	91.226	Haplochromis_burtoni
ENSCPOG00000005545	CSTF3	100	99.442	ENSHGLG00000017834	CSTF3	100	99.442	Heterocephalus_glaber_female
ENSCPOG00000005545	CSTF3	100	99.442	ENSHGLG00100018042	CSTF3	100	99.442	Heterocephalus_glaber_male
ENSCPOG00000005545	CSTF3	99	89.377	ENSHCOG00000015218	cstf3	100	88.997	Hippocampus_comes
ENSCPOG00000005545	CSTF3	100	90.098	ENSIPUG00000013170	CSTF3	100	90.098	Ictalurus_punctatus
ENSCPOG00000005545	CSTF3	100	99.582	ENSSTOG00000013306	CSTF3	100	99.582	Ictidomys_tridecemlineatus
ENSCPOG00000005545	CSTF3	100	87.237	ENSJJAG00000018430	Cstf3	99	87.308	Jaculus_jaculus
ENSCPOG00000005545	CSTF3	100	90.476	ENSKMAG00000010916	cstf3	100	89.833	Kryptolebias_marmoratus
ENSCPOG00000005545	CSTF3	100	90.336	ENSLBEG00000002306	cstf3	100	90.111	Labrus_bergylta
ENSCPOG00000005545	CSTF3	100	93.969	ENSLACG00000017296	CSTF3	100	93.724	Latimeria_chalumnae
ENSCPOG00000005545	CSTF3	100	93.268	ENSLOCG00000004415	cstf3	100	93.026	Lepisosteus_oculatus
ENSCPOG00000005545	CSTF3	100	99.163	ENSLAFG00000008712	CSTF3	100	99.163	Loxodonta_africana
ENSCPOG00000005545	CSTF3	100	99.582	ENSMFAG00000029516	CSTF3	100	99.680	Macaca_fascicularis
ENSCPOG00000005545	CSTF3	100	99.582	ENSMMUG00000002542	CSTF3	100	99.582	Macaca_mulatta
ENSCPOG00000005545	CSTF3	100	99.582	ENSMNEG00000021807	CSTF3	100	99.680	Macaca_nemestrina
ENSCPOG00000005545	CSTF3	100	99.582	ENSMLEG00000039594	CSTF3	100	99.680	Mandrillus_leucophaeus
ENSCPOG00000005545	CSTF3	100	91.317	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSCPOG00000005545	CSTF3	99	91.773	ENSMZEG00005012082	cstf3	100	91.226	Maylandia_zebra
ENSCPOG00000005545	CSTF3	100	97.911	ENSMGAG00000001383	CSTF3	100	97.911	Meleagris_gallopavo
ENSCPOG00000005545	CSTF3	100	99.024	ENSMAUG00000002487	Cstf3	100	99.024	Mesocricetus_auratus
ENSCPOG00000005545	CSTF3	100	99.303	ENSMICG00000004784	CSTF3	100	99.360	Microcebus_murinus
ENSCPOG00000005545	CSTF3	100	99.163	ENSMOCG00000017583	Cstf3	100	99.163	Microtus_ochrogaster
ENSCPOG00000005545	CSTF3	99	91.384	ENSMMOG00000016026	cstf3	95	91.127	Mola_mola
ENSCPOG00000005545	CSTF3	100	84.432	ENSMODG00000025205	-	100	84.240	Monodelphis_domestica
ENSCPOG00000005545	CSTF3	100	98.745	ENSMODG00000009745	-	100	98.745	Monodelphis_domestica
ENSCPOG00000005545	CSTF3	100	90.947	ENSMALG00000012050	cstf3	100	90.947	Monopterus_albus
ENSCPOG00000005545	CSTF3	100	99.163	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.163	Mus_caroli
ENSCPOG00000005545	CSTF3	100	99.163	ENSMUSG00000027176	Cstf3	100	99.163	Mus_musculus
ENSCPOG00000005545	CSTF3	100	99.163	MGP_PahariEiJ_G0025464	Cstf3	100	99.163	Mus_pahari
ENSCPOG00000005545	CSTF3	100	99.163	MGP_SPRETEiJ_G0024939	Cstf3	100	99.163	Mus_spretus
ENSCPOG00000005545	CSTF3	100	99.442	ENSMPUG00000011457	CSTF3	100	99.442	Mustela_putorius_furo
ENSCPOG00000005545	CSTF3	100	95.955	ENSMLUG00000026022	-	100	95.955	Myotis_lucifugus
ENSCPOG00000005545	CSTF3	99	99.435	ENSMLUG00000003073	-	99	99.435	Myotis_lucifugus
ENSCPOG00000005545	CSTF3	100	99.303	ENSNGAG00000010677	Cstf3	100	99.303	Nannospalax_galili
ENSCPOG00000005545	CSTF3	88	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSCPOG00000005545	CSTF3	100	99.582	ENSNLEG00000017901	CSTF3	100	99.680	Nomascus_leucogenys
ENSCPOG00000005545	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSCPOG00000005545	CSTF3	67	98.667	ENSOPRG00000000199	-	67	98.667	Ochotona_princeps
ENSCPOG00000005545	CSTF3	89	86.792	ENSODEG00000006311	-	97	86.792	Octodon_degus
ENSCPOG00000005545	CSTF3	100	99.303	ENSODEG00000016737	-	100	99.303	Octodon_degus
ENSCPOG00000005545	CSTF3	99	91.773	ENSONIG00000005563	cstf3	100	91.226	Oreochromis_niloticus
ENSCPOG00000005545	CSTF3	91	96.923	ENSOANG00000015140	CSTF3	100	96.923	Ornithorhynchus_anatinus
ENSCPOG00000005545	CSTF3	100	99.163	ENSOCUG00000015417	CSTF3	100	99.163	Oryctolagus_cuniculus
ENSCPOG00000005545	CSTF3	100	91.074	ENSORLG00000009762	cstf3	100	91.074	Oryzias_latipes
ENSCPOG00000005545	CSTF3	100	91.074	ENSORLG00020005540	cstf3	100	91.074	Oryzias_latipes_hni
ENSCPOG00000005545	CSTF3	100	90.934	ENSORLG00015003551	cstf3	100	90.934	Oryzias_latipes_hsok
ENSCPOG00000005545	CSTF3	100	90.463	ENSOMEG00000003848	cstf3	100	90.237	Oryzias_melastigma
ENSCPOG00000005545	CSTF3	100	99.167	ENSOGAG00000010229	CSTF3	100	99.167	Otolemur_garnettii
ENSCPOG00000005545	CSTF3	90	99.533	ENSOARG00000017271	CSTF3	99	99.533	Ovis_aries
ENSCPOG00000005545	CSTF3	99	96.192	ENSPPAG00000027358	CSTF3	99	96.192	Pan_paniscus
ENSCPOG00000005545	CSTF3	100	99.442	ENSPPRG00000016852	CSTF3	100	99.442	Panthera_pardus
ENSCPOG00000005545	CSTF3	100	99.442	ENSPTIG00000008716	CSTF3	100	99.442	Panthera_tigris_altaica
ENSCPOG00000005545	CSTF3	100	99.582	ENSPTRG00000003485	CSTF3	100	99.582	Pan_troglodytes
ENSCPOG00000005545	CSTF3	100	99.582	ENSPANG00000013722	CSTF3	100	99.582	Papio_anubis
ENSCPOG00000005545	CSTF3	100	92.329	ENSPKIG00000023648	cstf3	100	92.329	Paramormyrops_kingsleyae
ENSCPOG00000005545	CSTF3	100	97.195	ENSPSIG00000009173	CSTF3	100	97.075	Pelodiscus_sinensis
ENSCPOG00000005545	CSTF3	76	95.212	ENSPMGG00000000164	cstf3	99	95.212	Periophthalmus_magnuspinnatus
ENSCPOG00000005545	CSTF3	100	99.024	ENSPEMG00000011481	Cstf3	100	99.024	Peromyscus_maniculatus_bairdii
ENSCPOG00000005545	CSTF3	100	79.916	ENSPMAG00000007282	cstf3	99	79.888	Petromyzon_marinus
ENSCPOG00000005545	CSTF3	99	95.915	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSCPOG00000005545	CSTF3	100	81.092	ENSPCIG00000030419	-	90	81.755	Phascolarctos_cinereus
ENSCPOG00000005545	CSTF3	100	90.947	ENSPFOG00000017239	cstf3	100	90.947	Poecilia_formosa
ENSCPOG00000005545	CSTF3	100	90.947	ENSPLAG00000009456	cstf3	100	90.947	Poecilia_latipinna
ENSCPOG00000005545	CSTF3	100	90.947	ENSPMEG00000010320	cstf3	100	90.947	Poecilia_mexicana
ENSCPOG00000005545	CSTF3	100	90.947	ENSPREG00000013549	cstf3	100	90.947	Poecilia_reticulata
ENSCPOG00000005545	CSTF3	100	99.582	ENSPPYG00000003375	CSTF3	100	99.582	Pongo_abelii
ENSCPOG00000005545	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSCPOG00000005545	CSTF3	100	94.142	ENSPCOG00000014417	CSTF3	100	94.142	Propithecus_coquereli
ENSCPOG00000005545	CSTF3	100	94.142	ENSPVAG00000002350	CSTF3	100	94.142	Pteropus_vampyrus
ENSCPOG00000005545	CSTF3	99	91.773	ENSPNYG00000018259	cstf3	100	91.226	Pundamilia_nyererei
ENSCPOG00000005545	CSTF3	100	92.146	ENSPNAG00000020182	cstf3	100	91.911	Pygocentrus_nattereri
ENSCPOG00000005545	CSTF3	88	98.880	ENSRNOG00000012089	Cstf3	100	98.880	Rattus_norvegicus
ENSCPOG00000005545	CSTF3	99	98.307	ENSRBIG00000044258	CSTF3	100	99.680	Rhinopithecus_bieti
ENSCPOG00000005545	CSTF3	100	99.582	ENSRROG00000043450	CSTF3	100	99.680	Rhinopithecus_roxellana
ENSCPOG00000005545	CSTF3	100	99.582	ENSSBOG00000024764	CSTF3	100	99.680	Saimiri_boliviensis_boliviensis
ENSCPOG00000005545	CSTF3	100	85.554	ENSSHAG00000003135	-	99	85.554	Sarcophilus_harrisii
ENSCPOG00000005545	CSTF3	100	97.896	ENSSHAG00000018128	-	100	97.629	Sarcophilus_harrisii
ENSCPOG00000005545	CSTF3	100	92.426	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSCPOG00000005545	CSTF3	100	90.390	ENSSMAG00000002197	cstf3	100	90.390	Scophthalmus_maximus
ENSCPOG00000005545	CSTF3	100	91.226	ENSSDUG00000020426	cstf3	100	91.226	Seriola_dumerili
ENSCPOG00000005545	CSTF3	100	91.457	ENSSLDG00000025649	cstf3	100	91.365	Seriola_lalandi_dorsalis
ENSCPOG00000005545	CSTF3	100	99.163	ENSSARG00000000391	CSTF3	100	99.163	Sorex_araneus
ENSCPOG00000005545	CSTF3	97	96.961	ENSSPUG00000010546	CSTF3	100	96.961	Sphenodon_punctatus
ENSCPOG00000005545	CSTF3	100	91.317	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSCPOG00000005545	CSTF3	100	98.878	ENSSSCG00000040954	CSTF3	100	99.022	Sus_scrofa
ENSCPOG00000005545	CSTF3	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSCPOG00000005545	CSTF3	100	89.833	ENSTRUG00000004959	cstf3	100	89.833	Takifugu_rubripes
ENSCPOG00000005545	CSTF3	99	90.819	ENSTNIG00000013811	cstf3	99	90.563	Tetraodon_nigroviridis
ENSCPOG00000005545	CSTF3	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSCPOG00000005545	CSTF3	100	96.513	ENSTTRG00000016366	CSTF3	100	96.513	Tursiops_truncatus
ENSCPOG00000005545	CSTF3	99	99.436	ENSUMAG00000018971	CSTF3	100	99.360	Ursus_maritimus
ENSCPOG00000005545	CSTF3	100	99.442	ENSVPAG00000007800	CSTF3	100	99.442	Vicugna_pacos
ENSCPOG00000005545	CSTF3	99	99.718	ENSVVUG00000014938	CSTF3	100	99.680	Vulpes_vulpes
ENSCPOG00000005545	CSTF3	67	43.416	ENSXETG00000017946	-	100	43.416	Xenopus_tropicalis
ENSCPOG00000005545	CSTF3	89	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSCPOG00000005545	CSTF3	88	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSCPOG00000005545	CSTF3	100	90.947	ENSXMAG00000009545	cstf3	100	90.947	Xiphophorus_maculatus