EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005554 (Gene tree)
Gene ID: 100725108
Gene Symbol: -
Alias: -
Full Name: chromosome segregation 1 like
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 43995 bases
Position: chrDS562900.1:14678023-14722017
Accession: 100725108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023162	IBN_N	PF03810.19	2.9e-10	1	1
ENSCPOP00000005001	IBN_N	PF03810.19	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000005613	-	2748	-	ENSCPOP00000005001	915 (aa)	-	H0V5Q7
ENSCPOT00000046793	-	3458	XM_003467714	ENSCPOP00000023162	971 (aa)	XP_003467762	A0A286XCP2

Gene Model

Click here to download ENSCPOG00000005554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005554	-	100	88.877	ENSCPOG00000023180	-	100	88.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005554	-	100	99.382	ENSG00000124207	CSE1L	100	99.382	Homo_sapiens
ENSCPOG00000005554	-	100	88.877	ENSAPOG00000015943	cse1l	100	88.877	Acanthochromis_polyacanthus
ENSCPOG00000005554	-	100	98.970	ENSAMEG00000013717	CSE1L	100	98.970	Ailuropoda_melanoleuca
ENSCPOG00000005554	-	100	86.120	ENSACIG00000020004	cse1l	100	86.120	Amphilophus_citrinellus
ENSCPOG00000005554	-	100	88.774	ENSAOCG00000004356	cse1l	100	88.774	Amphiprion_ocellaris
ENSCPOG00000005554	-	100	88.877	ENSAPEG00000016588	cse1l	100	88.877	Amphiprion_percula
ENSCPOG00000005554	-	100	88.774	ENSATEG00000005414	cse1l	100	88.774	Anabas_testudineus
ENSCPOG00000005554	-	100	95.057	ENSAPLG00000010368	CSE1L	100	95.057	Anas_platyrhynchos
ENSCPOG00000005554	-	100	94.027	ENSACAG00000015951	CSE1L	100	94.027	Anolis_carolinensis
ENSCPOG00000005554	-	100	97.013	ENSANAG00000023526	CSE1L	100	97.013	Aotus_nancymaae
ENSCPOG00000005554	-	100	84.861	ENSACLG00000023214	cse1l	99	85.067	Astatotilapia_calliptera
ENSCPOG00000005554	-	100	87.333	ENSAMXG00000016416	cse1l	100	87.333	Astyanax_mexicanus
ENSCPOG00000005554	-	100	99.176	ENSBTAG00000005957	CSE1L	100	99.176	Bos_taurus
ENSCPOG00000005554	-	99	30.658	WBGene00002079	xpo-2	100	30.658	Caenorhabditis_elegans
ENSCPOG00000005554	-	100	99.176	ENSCJAG00000016296	CSE1L	100	99.176	Callithrix_jacchus
ENSCPOG00000005554	-	100	99.176	ENSCAFG00000011260	CSE1L	99	99.176	Canis_familiaris
ENSCPOG00000005554	-	100	98.798	ENSCAFG00020016114	CSE1L	100	98.798	Canis_lupus_dingo
ENSCPOG00000005554	-	100	98.867	ENSCHIG00000016579	CSE1L	100	98.867	Capra_hircus
ENSCPOG00000005554	-	100	99.279	ENSTSYG00000013400	CSE1L	100	99.279	Carlito_syrichta
ENSCPOG00000005554	-	100	80.765	ENSCAPG00000000237	-	100	80.765	Cavia_aperea
ENSCPOG00000005554	-	100	89.083	ENSCAPG00000004349	-	100	89.083	Cavia_aperea
ENSCPOG00000005554	-	100	99.279	ENSCCAG00000014373	CSE1L	100	99.279	Cebus_capucinus
ENSCPOG00000005554	-	100	99.382	ENSCATG00000039153	CSE1L	100	99.382	Cercocebus_atys
ENSCPOG00000005554	-	100	97.219	ENSCLAG00000006169	CSE1L	100	97.219	Chinchilla_lanigera
ENSCPOG00000005554	-	100	99.382	ENSCSAG00000014977	CSE1L	100	99.382	Chlorocebus_sabaeus
ENSCPOG00000005554	-	100	95.160	ENSCHOG00000004640	CSE1L	100	95.160	Choloepus_hoffmanni
ENSCPOG00000005554	-	100	95.263	ENSCPBG00000026743	CSE1L	100	95.263	Chrysemys_picta_bellii
ENSCPOG00000005554	-	98	63.533	ENSCING00000002277	-	99	63.017	Ciona_intestinalis
ENSCPOG00000005554	-	98	62.487	ENSCSAVG00000003299	-	98	62.487	Ciona_savignyi
ENSCPOG00000005554	-	100	97.116	ENSCANG00000041300	CSE1L	100	97.116	Colobus_angolensis_palliatus
ENSCPOG00000005554	-	100	98.970	ENSCGRG00001005670	Cse1l	100	98.970	Cricetulus_griseus_chok1gshd
ENSCPOG00000005554	-	100	98.970	ENSCGRG00000012164	Cse1l	100	98.970	Cricetulus_griseus_crigri
ENSCPOG00000005554	-	100	87.127	ENSCSEG00000002471	cse1l	100	87.127	Cynoglossus_semilaevis
ENSCPOG00000005554	-	100	88.157	ENSCVAG00000004319	cse1l	100	88.157	Cyprinodon_variegatus
ENSCPOG00000005554	-	100	86.406	ENSDARG00000006963	cse1l	100	86.406	Danio_rerio
ENSCPOG00000005554	-	100	99.176	ENSDNOG00000014906	CSE1L	100	99.176	Dasypus_novemcinctus
ENSCPOG00000005554	-	91	99.469	ENSDORG00000013960	Cse1l	100	99.469	Dipodomys_ordii
ENSCPOG00000005554	-	99	51.780	FBgn0022213	Cse1	99	51.780	Drosophila_melanogaster
ENSCPOG00000005554	-	73	80.000	ENSEBUG00000011135	cse1l	92	80.000	Eptatretus_burgeri
ENSCPOG00000005554	-	100	98.867	ENSEASG00005023345	CSE1L	100	98.798	Equus_asinus_asinus
ENSCPOG00000005554	-	100	98.661	ENSECAG00000015543	CSE1L	97	98.661	Equus_caballus
ENSCPOG00000005554	-	100	88.260	ENSELUG00000001309	cse1l	100	88.260	Esox_lucius
ENSCPOG00000005554	-	100	99.382	ENSFCAG00000001446	CSE1L	100	99.382	Felis_catus
ENSCPOG00000005554	-	100	95.057	ENSFALG00000012932	CSE1L	97	95.057	Ficedula_albicollis
ENSCPOG00000005554	-	100	98.907	ENSFDAG00000005180	CSE1L	100	98.907	Fukomys_damarensis
ENSCPOG00000005554	-	86	88.353	ENSFHEG00000005939	cse1l	93	88.353	Fundulus_heteroclitus
ENSCPOG00000005554	-	100	85.891	ENSGMOG00000007944	cse1l	100	85.891	Gadus_morhua
ENSCPOG00000005554	-	100	94.851	ENSGALG00000004707	CSE1L	100	94.851	Gallus_gallus
ENSCPOG00000005554	-	100	88.465	ENSGAFG00000021631	cse1l	100	88.465	Gambusia_affinis
ENSCPOG00000005554	-	100	87.539	ENSGACG00000000963	cse1l	100	87.539	Gasterosteus_aculeatus
ENSCPOG00000005554	-	97	95.016	ENSGAGG00000012815	CSE1L	99	95.016	Gopherus_agassizii
ENSCPOG00000005554	-	100	99.279	ENSGGOG00000010875	CSE1L	100	99.279	Gorilla_gorilla
ENSCPOG00000005554	-	100	88.465	ENSHBUG00000013599	cse1l	100	88.465	Haplochromis_burtoni
ENSCPOG00000005554	-	100	99.279	ENSHGLG00000009067	CSE1L	100	99.279	Heterocephalus_glaber_female
ENSCPOG00000005554	-	100	90.216	ENSHGLG00000014944	-	100	90.216	Heterocephalus_glaber_female
ENSCPOG00000005554	-	100	99.279	ENSHGLG00100001243	CSE1L	100	99.279	Heterocephalus_glaber_male
ENSCPOG00000005554	-	100	90.216	ENSHGLG00100014942	-	100	90.216	Heterocephalus_glaber_male
ENSCPOG00000005554	-	100	87.541	ENSHCOG00000005034	cse1l	100	87.541	Hippocampus_comes
ENSCPOG00000005554	-	100	87.333	ENSIPUG00000023752	cse1l	100	87.333	Ictalurus_punctatus
ENSCPOG00000005554	-	100	99.176	ENSSTOG00000003600	CSE1L	100	99.176	Ictidomys_tridecemlineatus
ENSCPOG00000005554	-	100	98.661	ENSJJAG00000016509	Cse1l	100	98.661	Jaculus_jaculus
ENSCPOG00000005554	-	100	88.980	ENSKMAG00000021099	cse1l	100	88.980	Kryptolebias_marmoratus
ENSCPOG00000005554	-	100	87.436	ENSLBEG00000012480	cse1l	100	86.885	Labrus_bergylta
ENSCPOG00000005554	-	100	90.731	ENSLACG00000015970	CSE1L	100	90.731	Latimeria_chalumnae
ENSCPOG00000005554	-	100	89.083	ENSLOCG00000003099	cse1l	100	89.083	Lepisosteus_oculatus
ENSCPOG00000005554	-	100	98.765	ENSLAFG00000006607	CSE1L	100	98.765	Loxodonta_africana
ENSCPOG00000005554	-	100	99.382	ENSMFAG00000034230	CSE1L	100	99.382	Macaca_fascicularis
ENSCPOG00000005554	-	100	99.344	ENSMMUG00000019636	CSE1L	100	99.344	Macaca_mulatta
ENSCPOG00000005554	-	100	99.382	ENSMNEG00000031340	CSE1L	100	99.382	Macaca_nemestrina
ENSCPOG00000005554	-	92	99.018	ENSMLEG00000042388	CSE1L	100	96.250	Mandrillus_leucophaeus
ENSCPOG00000005554	-	100	87.642	ENSMAMG00000023931	cse1l	100	87.642	Mastacembelus_armatus
ENSCPOG00000005554	-	100	88.260	ENSMZEG00005010674	cse1l	100	88.260	Maylandia_zebra
ENSCPOG00000005554	-	100	99.073	ENSMAUG00000001362	Cse1l	100	99.073	Mesocricetus_auratus
ENSCPOG00000005554	-	100	98.970	ENSMICG00000001988	CSE1L	100	98.970	Microcebus_murinus
ENSCPOG00000005554	-	100	98.867	ENSMOCG00000013597	Cse1l	100	98.867	Microtus_ochrogaster
ENSCPOG00000005554	-	100	84.037	ENSMMOG00000021787	cse1l	100	84.037	Mola_mola
ENSCPOG00000005554	-	100	96.910	ENSMODG00000016269	CSE1L	100	96.910	Monodelphis_domestica
ENSCPOG00000005554	-	100	87.230	ENSMALG00000017385	cse1l	100	87.230	Monopterus_albus
ENSCPOG00000005554	-	100	98.579	MGP_CAROLIEiJ_G0024698	Cse1l	100	98.579	Mus_caroli
ENSCPOG00000005554	-	100	98.579	ENSMUSG00000002718	Cse1l	100	98.579	Mus_musculus
ENSCPOG00000005554	-	100	98.251	MGP_PahariEiJ_G0026140	Cse1l	100	98.251	Mus_pahari
ENSCPOG00000005554	-	100	98.579	MGP_SPRETEiJ_G0025618	Cse1l	100	98.579	Mus_spretus
ENSCPOG00000005554	-	100	98.867	ENSMPUG00000017586	CSE1L	99	98.867	Mustela_putorius_furo
ENSCPOG00000005554	-	100	96.910	ENSMLUG00000008368	CSE1L	100	96.910	Myotis_lucifugus
ENSCPOG00000005554	-	100	98.560	ENSNGAG00000001115	Cse1l	100	98.560	Nannospalax_galili
ENSCPOG00000005554	-	100	88.363	ENSNBRG00000005053	cse1l	100	88.363	Neolamprologus_brichardi
ENSCPOG00000005554	-	100	98.043	ENSNLEG00000006945	CSE1L	100	98.043	Nomascus_leucogenys
ENSCPOG00000005554	-	75	88.000	ENSMEUG00000005658	-	73	88.000	Notamacropus_eugenii
ENSCPOG00000005554	-	95	98.049	ENSOPRG00000014530	CSE1L	90	98.049	Ochotona_princeps
ENSCPOG00000005554	-	100	99.126	ENSODEG00000006918	-	100	99.126	Octodon_degus
ENSCPOG00000005554	-	100	88.671	ENSONIG00000018970	cse1l	100	88.671	Oreochromis_niloticus
ENSCPOG00000005554	-	100	95.469	ENSOANG00000006402	CSE1L	99	95.469	Ornithorhynchus_anatinus
ENSCPOG00000005554	-	100	98.663	ENSOCUG00000005459	CSE1L	100	98.663	Oryctolagus_cuniculus
ENSCPOG00000005554	-	100	87.951	ENSORLG00000000603	cse1l	100	87.951	Oryzias_latipes
ENSCPOG00000005554	-	100	85.137	ENSORLG00020007653	cse1l	100	85.137	Oryzias_latipes_hni
ENSCPOG00000005554	-	56	88.807	ENSORLG00015003694	cse1l	97	88.807	Oryzias_latipes_hsok
ENSCPOG00000005554	-	100	88.363	ENSOMEG00000014357	cse1l	100	88.363	Oryzias_melastigma
ENSCPOG00000005554	-	100	97.023	ENSOGAG00000002126	CSE1L	100	97.023	Otolemur_garnettii
ENSCPOG00000005554	-	100	98.868	ENSOARG00000012031	CSE1L	100	98.868	Ovis_aries
ENSCPOG00000005554	-	100	99.382	ENSPPAG00000038391	CSE1L	100	99.382	Pan_paniscus
ENSCPOG00000005554	-	100	99.382	ENSPPRG00000022681	CSE1L	100	99.382	Panthera_pardus
ENSCPOG00000005554	-	100	99.382	ENSPTIG00000011919	CSE1L	100	99.344	Panthera_tigris_altaica
ENSCPOG00000005554	-	100	99.382	ENSPTRG00000013599	CSE1L	100	99.382	Pan_troglodytes
ENSCPOG00000005554	-	100	95.675	ENSPANG00000026147	CSE1L	100	95.675	Papio_anubis
ENSCPOG00000005554	-	100	88.260	ENSPKIG00000024520	cse1l	100	88.260	Paramormyrops_kingsleyae
ENSCPOG00000005554	-	100	95.778	ENSPSIG00000010864	CSE1L	99	95.778	Pelodiscus_sinensis
ENSCPOG00000005554	-	100	99.176	ENSPEMG00000000944	Cse1l	100	99.176	Peromyscus_maniculatus_bairdii
ENSCPOG00000005554	-	100	96.910	ENSPCIG00000023472	CSE1L	100	96.910	Phascolarctos_cinereus
ENSCPOG00000005554	-	100	89.083	ENSPFOG00000001989	cse1l	100	89.083	Poecilia_formosa
ENSCPOG00000005554	-	100	88.980	ENSPLAG00000015012	cse1l	100	88.980	Poecilia_latipinna
ENSCPOG00000005554	-	100	89.083	ENSPMEG00000022671	cse1l	100	89.083	Poecilia_mexicana
ENSCPOG00000005554	-	100	88.877	ENSPREG00000009081	cse1l	100	88.877	Poecilia_reticulata
ENSCPOG00000005554	-	100	99.382	ENSPPYG00000011110	CSE1L	100	99.382	Pongo_abelii
ENSCPOG00000005554	-	75	98.396	ENSPCAG00000007508	CSE1L	80	98.396	Procavia_capensis
ENSCPOG00000005554	-	92	98.482	ENSPCOG00000026411	CSE1L	100	98.482	Propithecus_coquereli
ENSCPOG00000005554	-	99	94.990	ENSPVAG00000015014	CSE1L	100	94.990	Pteropus_vampyrus
ENSCPOG00000005554	-	100	88.568	ENSPNYG00000007058	cse1l	100	88.568	Pundamilia_nyererei
ENSCPOG00000005554	-	100	87.024	ENSPNAG00000012903	cse1l	100	87.024	Pygocentrus_nattereri
ENSCPOG00000005554	-	100	97.837	ENSRNOG00000007665	Cse1l	100	97.837	Rattus_norvegicus
ENSCPOG00000005554	-	100	99.382	ENSRBIG00000029361	CSE1L	100	99.382	Rhinopithecus_bieti
ENSCPOG00000005554	-	100	99.382	ENSRROG00000021686	CSE1L	100	99.382	Rhinopithecus_roxellana
ENSCPOG00000005554	-	96	36.931	YGL238W	CSE1	91	37.935	Saccharomyces_cerevisiae
ENSCPOG00000005554	-	100	99.279	ENSSBOG00000021396	CSE1L	100	99.279	Saimiri_boliviensis_boliviensis
ENSCPOG00000005554	-	100	87.436	ENSSFOG00015021428	cse1l	100	87.436	Scleropages_formosus
ENSCPOG00000005554	-	100	87.951	ENSSMAG00000000580	cse1l	96	87.951	Scophthalmus_maximus
ENSCPOG00000005554	-	100	88.671	ENSSDUG00000012110	cse1l	100	88.671	Seriola_dumerili
ENSCPOG00000005554	-	100	88.671	ENSSLDG00000022083	cse1l	100	88.671	Seriola_lalandi_dorsalis
ENSCPOG00000005554	-	100	95.366	ENSSPUG00000017941	CSE1L	100	95.366	Sphenodon_punctatus
ENSCPOG00000005554	-	100	88.568	ENSSPAG00000008182	cse1l	100	88.568	Stegastes_partitus
ENSCPOG00000005554	-	100	99.279	ENSSSCG00000025534	CSE1L	99	99.279	Sus_scrofa
ENSCPOG00000005554	-	100	94.748	ENSTGUG00000008823	CSE1L	100	94.748	Taeniopygia_guttata
ENSCPOG00000005554	-	96	85.760	ENSTRUG00000005496	cse1l	97	85.760	Takifugu_rubripes
ENSCPOG00000005554	-	100	87.436	ENSTNIG00000014631	cse1l	100	87.436	Tetraodon_nigroviridis
ENSCPOG00000005554	-	100	89.907	ENSTBEG00000008338	CSE1L	100	89.907	Tupaia_belangeri
ENSCPOG00000005554	-	91	98.684	ENSTTRG00000004279	CSE1L	91	98.684	Tursiops_truncatus
ENSCPOG00000005554	-	100	98.867	ENSUAMG00000025448	CSE1L	99	98.867	Ursus_americanus
ENSCPOG00000005554	-	100	98.867	ENSUMAG00000024476	CSE1L	99	98.867	Ursus_maritimus
ENSCPOG00000005554	-	100	94.851	ENSVPAG00000001312	CSE1L	100	94.851	Vicugna_pacos
ENSCPOG00000005554	-	100	99.176	ENSVVUG00000022322	CSE1L	99	99.176	Vulpes_vulpes
ENSCPOG00000005554	-	100	88.157	ENSXETG00000001784	cse1l	100	88.157	Xenopus_tropicalis
ENSCPOG00000005554	-	100	87.869	ENSXCOG00000000805	cse1l	100	87.869	Xiphophorus_couchianus
ENSCPOG00000005554	-	100	88.774	ENSXMAG00000001306	cse1l	100	88.774	Xiphophorus_maculatus