EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005566 (Gene tree)
Gene ID: 100733497
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 30777 bases
Position: chrDS562900.1:14729238-14760014
Accession: 100733497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005013	dsrm	PF00035.26	5.7e-31	1	3
ENSCPOP00000005013	dsrm	PF00035.26	5.7e-31	2	3
ENSCPOP00000005013	dsrm	PF00035.26	5.7e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000005626	STAU1-201	1440	XM_013150404	ENSCPOP00000005013	479 (aa)	XP_013005858	H0V5R8

Gene Model

Click here to download ENSCPOG00000005566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005566	STAU1	85	51.415	ENSCPOG00000015001	-	84	52.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005566	STAU1	100	93.131	ENSG00000124214	STAU1	96	96.875	Homo_sapiens
ENSCPOG00000005566	STAU1	99	70.400	ENSAPOG00000017260	stau1	71	70.400	Acanthochromis_polyacanthus
ENSCPOG00000005566	STAU1	99	90.020	ENSAMEG00000013681	STAU1	69	90.020	Ailuropoda_melanoleuca
ENSCPOG00000005566	STAU1	99	71.919	ENSACIG00000015918	stau1	71	72.581	Amphilophus_citrinellus
ENSCPOG00000005566	STAU1	99	71.400	ENSAOCG00000012224	stau1	71	71.400	Amphiprion_ocellaris
ENSCPOG00000005566	STAU1	99	71.600	ENSAPEG00000012308	stau1	71	71.600	Amphiprion_percula
ENSCPOG00000005566	STAU1	99	71.774	ENSATEG00000024600	stau1	73	71.774	Anabas_testudineus
ENSCPOG00000005566	STAU1	99	85.132	ENSAPLG00000010527	STAU1	69	85.132	Anas_platyrhynchos
ENSCPOG00000005566	STAU1	99	85.163	ENSACAG00000015909	STAU1	70	85.163	Anolis_carolinensis
ENSCPOG00000005566	STAU1	100	93.131	ENSANAG00000032714	STAU1	99	86.263	Aotus_nancymaae
ENSCPOG00000005566	STAU1	99	71.000	ENSACLG00000012270	stau1	71	71.000	Astatotilapia_calliptera
ENSCPOG00000005566	STAU1	100	69.679	ENSAMXG00000016812	stau1	84	69.679	Astyanax_mexicanus
ENSCPOG00000005566	STAU1	100	90.303	ENSBTAG00000000241	STAU1	85	90.303	Bos_taurus
ENSCPOG00000005566	STAU1	100	92.929	ENSCJAG00000016233	STAU1	85	92.121	Callithrix_jacchus
ENSCPOG00000005566	STAU1	100	89.899	ENSCAFG00000011347	STAU1	83	89.899	Canis_familiaris
ENSCPOG00000005566	STAU1	100	88.645	ENSCAFG00020017123	STAU1	82	88.645	Canis_lupus_dingo
ENSCPOG00000005566	STAU1	100	90.303	ENSCHIG00000001799	-	100	84.040	Capra_hircus
ENSCPOG00000005566	STAU1	100	89.697	ENSTSYG00000036179	-	85	89.697	Carlito_syrichta
ENSCPOG00000005566	STAU1	100	92.525	ENSCAPG00000017041	STAU1	99	92.525	Cavia_aperea
ENSCPOG00000005566	STAU1	100	92.929	ENSCCAG00000034339	STAU1	85	92.929	Cebus_capucinus
ENSCPOG00000005566	STAU1	100	93.131	ENSCATG00000028474	STAU1	99	93.131	Cercocebus_atys
ENSCPOG00000005566	STAU1	100	95.354	ENSCLAG00000006516	-	100	95.354	Chinchilla_lanigera
ENSCPOG00000005566	STAU1	100	75.453	ENSCLAG00000002784	-	98	75.453	Chinchilla_lanigera
ENSCPOG00000005566	STAU1	100	91.919	ENSCSAG00000014986	STAU1	99	91.919	Chlorocebus_sabaeus
ENSCPOG00000005566	STAU1	100	90.726	ENSCHOG00000001511	STAU1	85	90.726	Choloepus_hoffmanni
ENSCPOG00000005566	STAU1	99	85.163	ENSCPBG00000026741	STAU1	71	85.163	Chrysemys_picta_bellii
ENSCPOG00000005566	STAU1	100	91.919	ENSCANG00000039220	STAU1	99	83.266	Colobus_angolensis_palliatus
ENSCPOG00000005566	STAU1	100	88.687	ENSCGRG00001013453	Stau1	100	88.687	Cricetulus_griseus_chok1gshd
ENSCPOG00000005566	STAU1	100	88.687	ENSCGRG00000007216	Stau1	100	88.687	Cricetulus_griseus_crigri
ENSCPOG00000005566	STAU1	99	64.372	ENSCSEG00000000792	stau1	68	65.121	Cynoglossus_semilaevis
ENSCPOG00000005566	STAU1	99	69.512	ENSCVAG00000005906	stau1	86	70.183	Cyprinodon_variegatus
ENSCPOG00000005566	STAU1	99	69.661	ENSDARG00000044182	stau1	78	69.661	Danio_rerio
ENSCPOG00000005566	STAU1	100	90.927	ENSDNOG00000014933	STAU1	83	90.927	Dasypus_novemcinctus
ENSCPOG00000005566	STAU1	100	88.687	ENSDORG00000030220	Stau1	100	88.687	Dipodomys_ordii
ENSCPOG00000005566	STAU1	84	96.522	ENSETEG00000018235	STAU1	72	96.522	Echinops_telfairi
ENSCPOG00000005566	STAU1	100	91.717	ENSEASG00005023343	STAU1	88	90.270	Equus_asinus_asinus
ENSCPOG00000005566	STAU1	100	90.505	ENSECAG00000012894	STAU1	85	90.505	Equus_caballus
ENSCPOG00000005566	STAU1	80	88.529	ENSEEUG00000014344	STAU1	68	88.529	Erinaceus_europaeus
ENSCPOG00000005566	STAU1	99	69.428	ENSELUG00000002529	stau1	77	69.428	Esox_lucius
ENSCPOG00000005566	STAU1	100	91.111	ENSFCAG00000001447	STAU1	99	83.636	Felis_catus
ENSCPOG00000005566	STAU1	99	82.317	ENSFALG00000012940	STAU1	70	82.317	Ficedula_albicollis
ENSCPOG00000005566	STAU1	100	94.545	ENSFDAG00000014119	-	100	94.545	Fukomys_damarensis
ENSCPOG00000005566	STAU1	99	70.994	ENSFDAG00000020837	-	98	71.138	Fukomys_damarensis
ENSCPOG00000005566	STAU1	99	70.200	ENSFHEG00000013517	stau1	85	70.101	Fundulus_heteroclitus
ENSCPOG00000005566	STAU1	99	63.086	ENSGMOG00000016850	stau1	71	63.086	Gadus_morhua
ENSCPOG00000005566	STAU1	99	85.132	ENSGALG00000004736	STAU1	70	84.350	Gallus_gallus
ENSCPOG00000005566	STAU1	99	70.741	ENSGAFG00000010437	stau1	71	70.741	Gambusia_affinis
ENSCPOG00000005566	STAU1	99	70.942	ENSGACG00000001352	stau1	72	70.659	Gasterosteus_aculeatus
ENSCPOG00000005566	STAU1	99	83.943	ENSGAGG00000009825	STAU1	70	83.943	Gopherus_agassizii
ENSCPOG00000005566	STAU1	100	93.333	ENSGGOG00000025351	STAU1	99	93.333	Gorilla_gorilla
ENSCPOG00000005566	STAU1	99	71.200	ENSHBUG00000023668	stau1	71	71.200	Haplochromis_burtoni
ENSCPOG00000005566	STAU1	100	94.141	ENSHGLG00000008730	STAU1	100	94.141	Heterocephalus_glaber_female
ENSCPOG00000005566	STAU1	100	95.354	ENSHGLG00100000098	STAU1	100	95.354	Heterocephalus_glaber_male
ENSCPOG00000005566	STAU1	99	67.606	ENSHCOG00000018461	stau1	70	67.606	Hippocampus_comes
ENSCPOG00000005566	STAU1	94	69.510	ENSIPUG00000023725	stau1	70	69.510	Ictalurus_punctatus
ENSCPOG00000005566	STAU1	100	92.121	ENSSTOG00000003634	STAU1	100	92.121	Ictidomys_tridecemlineatus
ENSCPOG00000005566	STAU1	100	89.697	ENSJJAG00000020032	Stau1	100	89.697	Jaculus_jaculus
ENSCPOG00000005566	STAU1	99	68.623	ENSKMAG00000007135	stau1	71	69.293	Kryptolebias_marmoratus
ENSCPOG00000005566	STAU1	99	69.109	ENSLBEG00000020172	stau1	71	69.109	Labrus_bergylta
ENSCPOG00000005566	STAU1	99	78.586	ENSLACG00000016157	STAU1	70	77.336	Latimeria_chalumnae
ENSCPOG00000005566	STAU1	99	75.000	ENSLOCG00000003134	stau1	71	75.000	Lepisosteus_oculatus
ENSCPOG00000005566	STAU1	100	89.293	ENSLAFG00000003238	STAU1	96	89.293	Loxodonta_africana
ENSCPOG00000005566	STAU1	100	93.131	ENSMFAG00000040931	STAU1	99	93.131	Macaca_fascicularis
ENSCPOG00000005566	STAU1	100	93.131	ENSMMUG00000002302	STAU1	99	93.131	Macaca_mulatta
ENSCPOG00000005566	STAU1	100	93.131	ENSMNEG00000033821	STAU1	99	93.131	Macaca_nemestrina
ENSCPOG00000005566	STAU1	100	92.121	ENSMLEG00000031383	STAU1	85	92.121	Mandrillus_leucophaeus
ENSCPOG00000005566	STAU1	99	72.177	ENSMAMG00000017586	stau1	74	72.177	Mastacembelus_armatus
ENSCPOG00000005566	STAU1	99	71.000	ENSMZEG00005015605	stau1	71	71.000	Maylandia_zebra
ENSCPOG00000005566	STAU1	99	84.929	ENSMGAG00000004719	STAU1	69	84.929	Meleagris_gallopavo
ENSCPOG00000005566	STAU1	100	88.485	ENSMAUG00000013846	Stau1	100	88.485	Mesocricetus_auratus
ENSCPOG00000005566	STAU1	100	92.323	ENSMICG00000001995	STAU1	85	92.323	Microcebus_murinus
ENSCPOG00000005566	STAU1	100	89.697	ENSMOCG00000018743	Stau1	100	89.697	Microtus_ochrogaster
ENSCPOG00000005566	STAU1	100	69.153	ENSMMOG00000015455	stau1	98	69.618	Mola_mola
ENSCPOG00000005566	STAU1	100	88.081	ENSMODG00000016276	STAU1	73	88.081	Monodelphis_domestica
ENSCPOG00000005566	STAU1	99	71.400	ENSMALG00000000045	stau1	71	71.400	Monopterus_albus
ENSCPOG00000005566	STAU1	100	87.879	MGP_CAROLIEiJ_G0024699	Stau1	100	87.879	Mus_caroli
ENSCPOG00000005566	STAU1	100	87.273	ENSMUSG00000039536	Stau1	100	87.273	Mus_musculus
ENSCPOG00000005566	STAU1	100	87.475	MGP_PahariEiJ_G0026141	Stau1	100	87.475	Mus_pahari
ENSCPOG00000005566	STAU1	100	86.869	MGP_SPRETEiJ_G0025619	Stau1	100	86.869	Mus_spretus
ENSCPOG00000005566	STAU1	99	90.631	ENSMPUG00000017581	STAU1	72	90.631	Mustela_putorius_furo
ENSCPOG00000005566	STAU1	100	90.101	ENSMLUG00000008407	STAU1	83	90.101	Myotis_lucifugus
ENSCPOG00000005566	STAU1	100	91.919	ENSNGAG00000007108	Stau1	100	91.919	Nannospalax_galili
ENSCPOG00000005566	STAU1	99	71.200	ENSNBRG00000017596	stau1	71	71.200	Neolamprologus_brichardi
ENSCPOG00000005566	STAU1	100	92.929	ENSNLEG00000006955	STAU1	99	92.929	Nomascus_leucogenys
ENSCPOG00000005566	STAU1	94	88.248	ENSMEUG00000003263	STAU1	80	88.248	Notamacropus_eugenii
ENSCPOG00000005566	STAU1	100	89.919	ENSOPRG00000014569	STAU1	86	89.919	Ochotona_princeps
ENSCPOG00000005566	STAU1	100	92.323	ENSODEG00000006523	STAU1	99	93.131	Octodon_degus
ENSCPOG00000005566	STAU1	99	71.600	ENSONIG00000004152	stau1	68	71.600	Oreochromis_niloticus
ENSCPOG00000005566	STAU1	99	85.163	ENSOANG00000006394	STAU1	70	85.163	Ornithorhynchus_anatinus
ENSCPOG00000005566	STAU1	100	92.323	ENSOCUG00000006214	STAU1	85	92.323	Oryctolagus_cuniculus
ENSCPOG00000005566	STAU1	99	69.076	ENSOMEG00000002388	stau1	71	69.076	Oryzias_melastigma
ENSCPOG00000005566	STAU1	100	91.919	ENSOGAG00000002127	STAU1	83	91.919	Otolemur_garnettii
ENSCPOG00000005566	STAU1	100	62.970	ENSOGAG00000028222	-	98	63.400	Otolemur_garnettii
ENSCPOG00000005566	STAU1	100	90.303	ENSOARG00000012204	STAU1	83	90.303	Ovis_aries
ENSCPOG00000005566	STAU1	100	93.333	ENSPPAG00000032023	STAU1	99	93.333	Pan_paniscus
ENSCPOG00000005566	STAU1	100	91.111	ENSPPRG00000003436	STAU1	99	91.111	Panthera_pardus
ENSCPOG00000005566	STAU1	100	91.111	ENSPTIG00000011768	STAU1	99	89.841	Panthera_tigris_altaica
ENSCPOG00000005566	STAU1	100	93.333	ENSPTRG00000023130	STAU1	99	93.333	Pan_troglodytes
ENSCPOG00000005566	STAU1	100	92.121	ENSPANG00000020560	STAU1	99	87.298	Papio_anubis
ENSCPOG00000005566	STAU1	99	70.600	ENSPKIG00000024588	stau1	71	70.600	Paramormyrops_kingsleyae
ENSCPOG00000005566	STAU1	99	83.740	ENSPSIG00000010731	STAU1	70	83.740	Pelodiscus_sinensis
ENSCPOG00000005566	STAU1	99	72.874	ENSPMGG00000018553	stau1	98	69.796	Periophthalmus_magnuspinnatus
ENSCPOG00000005566	STAU1	100	88.889	ENSPEMG00000022045	Stau1	100	88.889	Peromyscus_maniculatus_bairdii
ENSCPOG00000005566	STAU1	100	89.091	ENSPCIG00000023269	STAU1	99	83.232	Phascolarctos_cinereus
ENSCPOG00000005566	STAU1	99	70.800	ENSPFOG00000017253	stau1	71	70.800	Poecilia_formosa
ENSCPOG00000005566	STAU1	65	67.516	ENSPLAG00000014829	stau1	77	69.427	Poecilia_latipinna
ENSCPOG00000005566	STAU1	93	69.872	ENSPMEG00000007495	stau1	67	69.872	Poecilia_mexicana
ENSCPOG00000005566	STAU1	99	70.400	ENSPREG00000003477	stau1	71	70.400	Poecilia_reticulata
ENSCPOG00000005566	STAU1	100	92.121	ENSPPYG00000011111	STAU1	85	92.121	Pongo_abelii
ENSCPOG00000005566	STAU1	93	80.303	ENSPCAG00000002459	STAU1	84	80.303	Procavia_capensis
ENSCPOG00000005566	STAU1	100	92.525	ENSPCOG00000027746	STAU1	99	92.525	Propithecus_coquereli
ENSCPOG00000005566	STAU1	82	98.148	ENSPVAG00000015019	STAU1	71	98.148	Pteropus_vampyrus
ENSCPOG00000005566	STAU1	99	71.200	ENSPNYG00000014436	stau1	71	71.200	Pundamilia_nyererei
ENSCPOG00000005566	STAU1	99	68.787	ENSPNAG00000011323	stau1	77	68.787	Pygocentrus_nattereri
ENSCPOG00000005566	STAU1	100	88.081	ENSRNOG00000007781	Stau1	100	88.081	Rattus_norvegicus
ENSCPOG00000005566	STAU1	100	93.131	ENSRBIG00000037345	STAU1	99	93.131	Rhinopithecus_bieti
ENSCPOG00000005566	STAU1	100	92.121	ENSRROG00000039008	STAU1	99	91.717	Rhinopithecus_roxellana
ENSCPOG00000005566	STAU1	100	92.929	ENSSBOG00000034448	STAU1	99	88.283	Saimiri_boliviensis_boliviensis
ENSCPOG00000005566	STAU1	100	88.283	ENSSHAG00000009492	STAU1	83	88.283	Sarcophilus_harrisii
ENSCPOG00000005566	STAU1	99	72.379	ENSSFOG00015021497	stau1	85	69.380	Scleropages_formosus
ENSCPOG00000005566	STAU1	99	71.400	ENSSMAG00000017410	stau1	71	71.400	Scophthalmus_maximus
ENSCPOG00000005566	STAU1	99	72.200	ENSSDUG00000019439	stau1	71	72.200	Seriola_dumerili
ENSCPOG00000005566	STAU1	99	72.200	ENSSLDG00000025040	stau1	71	72.200	Seriola_lalandi_dorsalis
ENSCPOG00000005566	STAU1	99	84.756	ENSSPUG00000017983	STAU1	73	84.725	Sphenodon_punctatus
ENSCPOG00000005566	STAU1	99	71.600	ENSSPAG00000019275	stau1	71	71.600	Stegastes_partitus
ENSCPOG00000005566	STAU1	100	91.515	ENSSSCG00000027444	STAU1	99	91.515	Sus_scrofa
ENSCPOG00000005566	STAU1	99	83.943	ENSTGUG00000008784	STAU1	69	83.943	Taeniopygia_guttata
ENSCPOG00000005566	STAU1	99	71.573	ENSTRUG00000005837	stau1	70	72.233	Takifugu_rubripes
ENSCPOG00000005566	STAU1	99	71.058	ENSTNIG00000014732	stau1	73	71.058	Tetraodon_nigroviridis
ENSCPOG00000005566	STAU1	100	77.621	ENSTBEG00000009404	STAU1	85	77.621	Tupaia_belangeri
ENSCPOG00000005566	STAU1	94	88.675	ENSTTRG00000004285	STAU1	80	88.675	Tursiops_truncatus
ENSCPOG00000005566	STAU1	100	88.845	ENSUAMG00000025449	STAU1	99	88.845	Ursus_americanus
ENSCPOG00000005566	STAU1	74	86.207	ENSUMAG00000024475	STAU1	87	86.207	Ursus_maritimus
ENSCPOG00000005566	STAU1	100	91.313	ENSVPAG00000001313	STAU1	85	91.313	Vicugna_pacos
ENSCPOG00000005566	STAU1	100	88.845	ENSVVUG00000022325	STAU1	73	88.845	Vulpes_vulpes
ENSCPOG00000005566	STAU1	99	77.236	ENSXETG00000001783	stau1	70	77.439	Xenopus_tropicalis
ENSCPOG00000005566	STAU1	57	69.343	ENSXCOG00000008804	stau1	72	69.310	Xiphophorus_couchianus
ENSCPOG00000005566	STAU1	99	70.741	ENSXMAG00000016175	stau1	71	70.741	Xiphophorus_maculatus