EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005679 (Gene tree)
Gene ID: 100715055
Gene Symbol: RBM17
Alias: MGC14439|SPF45
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 21419 bases
Position: chrDS562871.1:17095526-17116944
Accession: 100715055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005121	RRM_1	PF00076.22	7e-05	1	1
ENSCPOP00000032612	RRM_1	PF00076.22	7.7e-05	1	1
ENSCPOP00000005121	G-patch	PF01585.23	4.6e-13	1	1
ENSCPOP00000032612	G-patch	PF01585.23	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000038354	RBM17-203	1212	-	ENSCPOP00000032612	403 (aa)	-	A0A286Y523
ENSCPOT00000005740	RBM17-202	1164	XM_013156281	ENSCPOP00000005121	387 (aa)	XP_013011735	H0V616
ENSCPOT00000038594	RBM17-201	1491	-	ENSCPOP00000021509	119 (aa)	-	A0A286X7X4

Gene Model

Click here to download ENSCPOG00000005679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005679	RBM17	100	94.118	ENSG00000134453	RBM17	100	94.118	Homo_sapiens
ENSCPOG00000005679	RBM17	99	78.218	ENSAPOG00000007101	rbm17	99	78.325	Acanthochromis_polyacanthus
ENSCPOG00000005679	RBM17	100	94.118	ENSAMEG00000002107	RBM17	100	94.118	Ailuropoda_melanoleuca
ENSCPOG00000005679	RBM17	100	78.729	ENSACIG00000006251	rbm17	100	78.729	Amphilophus_citrinellus
ENSCPOG00000005679	RBM17	100	78.293	ENSAOCG00000014892	rbm17	100	78.465	Amphiprion_ocellaris
ENSCPOG00000005679	RBM17	100	78.293	ENSAPEG00000022779	rbm17	100	78.465	Amphiprion_percula
ENSCPOG00000005679	RBM17	100	76.039	ENSATEG00000004406	rbm17	100	76.108	Anabas_testudineus
ENSCPOG00000005679	RBM17	100	90.709	ENSAPLG00000004190	RBM17	100	90.709	Anas_platyrhynchos
ENSCPOG00000005679	RBM17	89	85.791	ENSACAG00000005418	RBM17	99	86.059	Anolis_carolinensis
ENSCPOG00000005679	RBM17	99	85.354	ENSANAG00000019330	-	98	91.736	Aotus_nancymaae
ENSCPOG00000005679	RBM17	100	94.554	ENSANAG00000030127	RBM17	100	94.514	Aotus_nancymaae
ENSCPOG00000005679	RBM17	100	78.818	ENSACLG00000003928	rbm17	100	79.800	Astatotilapia_calliptera
ENSCPOG00000005679	RBM17	100	76.108	ENSAMXG00000005853	rbm17	100	76.368	Astyanax_mexicanus
ENSCPOG00000005679	RBM17	100	92.157	ENSBTAG00000011094	-	100	92.157	Bos_taurus
ENSCPOG00000005679	RBM17	100	93.627	ENSBTAG00000021951	RBM17	100	93.627	Bos_taurus
ENSCPOG00000005679	RBM17	72	33.882	WBGene00010233	F58B3.7	91	32.398	Caenorhabditis_elegans
ENSCPOG00000005679	RBM17	99	95.939	ENSCJAG00000020573	RBM17	100	95.939	Callithrix_jacchus
ENSCPOG00000005679	RBM17	100	94.118	ENSCAFG00000005206	RBM17	100	94.118	Canis_familiaris
ENSCPOG00000005679	RBM17	99	96.429	ENSCAFG00020005420	RBM17	100	96.429	Canis_lupus_dingo
ENSCPOG00000005679	RBM17	99	97.668	ENSCHIG00000023204	-	100	97.668	Capra_hircus
ENSCPOG00000005679	RBM17	100	90.931	ENSCHIG00000019921	-	100	90.931	Capra_hircus
ENSCPOG00000005679	RBM17	100	93.873	ENSTSYG00000001165	RBM17	97	99.130	Carlito_syrichta
ENSCPOG00000005679	RBM17	96	80.811	ENSCAPG00000006275	RBM17	100	86.455	Cavia_aperea
ENSCPOG00000005679	RBM17	100	94.118	ENSCCAG00000018655	RBM17	100	94.118	Cebus_capucinus
ENSCPOG00000005679	RBM17	99	98.187	ENSCATG00000041566	RBM17	100	98.187	Cercocebus_atys
ENSCPOG00000005679	RBM17	100	95.588	ENSCLAG00000012195	RBM17	100	94.828	Chinchilla_lanigera
ENSCPOG00000005679	RBM17	100	94.118	ENSCSAG00000013564	RBM17	100	94.118	Chlorocebus_sabaeus
ENSCPOG00000005679	RBM17	92	74.536	ENSCHOG00000005131	RBM17	100	74.536	Choloepus_hoffmanni
ENSCPOG00000005679	RBM17	100	89.976	ENSCPBG00000019836	RBM17	100	89.976	Chrysemys_picta_bellii
ENSCPOG00000005679	RBM17	100	45.631	ENSCSAVG00000008782	-	100	44.048	Ciona_savignyi
ENSCPOG00000005679	RBM17	97	84.921	ENSCANG00000023715	-	100	83.333	Colobus_angolensis_palliatus
ENSCPOG00000005679	RBM17	100	94.307	ENSCANG00000030987	RBM17	100	94.307	Colobus_angolensis_palliatus
ENSCPOG00000005679	RBM17	100	74.938	ENSCGRG00001009256	-	100	74.093	Cricetulus_griseus_chok1gshd
ENSCPOG00000005679	RBM17	100	95.098	ENSCGRG00001013842	Rbm17	100	95.098	Cricetulus_griseus_chok1gshd
ENSCPOG00000005679	RBM17	100	95.098	ENSCGRG00000006907	Rbm17	100	95.098	Cricetulus_griseus_crigri
ENSCPOG00000005679	RBM17	100	78.502	ENSCSEG00000018164	rbm17	100	77.751	Cynoglossus_semilaevis
ENSCPOG00000005679	RBM17	99	75.567	ENSCVAG00000002476	rbm17	100	77.834	Cyprinodon_variegatus
ENSCPOG00000005679	RBM17	100	76.941	ENSDARG00000031346	rbm17	100	75.355	Danio_rerio
ENSCPOG00000005679	RBM17	100	93.627	ENSDNOG00000035920	RBM17	100	93.627	Dasypus_novemcinctus
ENSCPOG00000005679	RBM17	99	36.384	FBgn0086683	Spf45	99	36.957	Drosophila_melanogaster
ENSCPOG00000005679	RBM17	99	74.321	ENSETEG00000006642	RBM17	100	74.321	Echinops_telfairi
ENSCPOG00000005679	RBM17	66	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSCPOG00000005679	RBM17	92	90.716	ENSEASG00005009236	-	100	90.716	Equus_asinus_asinus
ENSCPOG00000005679	RBM17	99	98.450	ENSEASG00005019205	-	100	98.450	Equus_asinus_asinus
ENSCPOG00000005679	RBM17	100	83.824	ENSECAG00000001379	-	100	83.824	Equus_caballus
ENSCPOG00000005679	RBM17	99	87.855	ENSECAG00000008939	RBM17	100	87.855	Equus_caballus
ENSCPOG00000005679	RBM17	86	75.214	ENSEEUG00000013077	RBM17	100	75.214	Erinaceus_europaeus
ENSCPOG00000005679	RBM17	100	74.942	ENSELUG00000006440	rbm17	100	74.942	Esox_lucius
ENSCPOG00000005679	RBM17	100	94.118	ENSFCAG00000031988	RBM17	100	94.118	Felis_catus
ENSCPOG00000005679	RBM17	100	89.487	ENSFALG00000001790	RBM17	100	89.487	Ficedula_albicollis
ENSCPOG00000005679	RBM17	100	95.588	ENSFDAG00000007470	RBM17	100	95.588	Fukomys_damarensis
ENSCPOG00000005679	RBM17	99	80.818	ENSFHEG00000001266	rbm17	100	81.586	Fundulus_heteroclitus
ENSCPOG00000005679	RBM17	99	74.038	ENSGMOG00000008438	rbm17	100	72.422	Gadus_morhua
ENSCPOG00000005679	RBM17	100	90.465	ENSGALG00000006332	RBM17	100	90.465	Gallus_gallus
ENSCPOG00000005679	RBM17	99	78.894	ENSGAFG00000019879	rbm17	100	79.648	Gambusia_affinis
ENSCPOG00000005679	RBM17	99	77.913	ENSGACG00000019174	rbm17	99	76.658	Gasterosteus_aculeatus
ENSCPOG00000005679	RBM17	100	89.976	ENSGAGG00000019906	RBM17	100	89.976	Gopherus_agassizii
ENSCPOG00000005679	RBM17	100	78.973	ENSHBUG00000016624	rbm17	100	79.800	Haplochromis_burtoni
ENSCPOG00000005679	RBM17	100	95.588	ENSHGLG00000011580	RBM17	100	95.588	Heterocephalus_glaber_female
ENSCPOG00000005679	RBM17	99	78.756	ENSHGLG00100010556	-	100	77.202	Heterocephalus_glaber_male
ENSCPOG00000005679	RBM17	100	95.588	ENSHGLG00100010460	RBM17	100	95.588	Heterocephalus_glaber_male
ENSCPOG00000005679	RBM17	99	75.414	ENSHCOG00000010865	rbm17	100	73.634	Hippocampus_comes
ENSCPOG00000005679	RBM17	100	78.345	ENSIPUG00000007699	Rbm17	100	78.345	Ictalurus_punctatus
ENSCPOG00000005679	RBM17	100	95.343	ENSSTOG00000013591	RBM17	100	95.343	Ictidomys_tridecemlineatus
ENSCPOG00000005679	RBM17	100	70.098	ENSJJAG00000000993	-	100	65.610	Jaculus_jaculus
ENSCPOG00000005679	RBM17	100	95.098	ENSJJAG00000022886	Rbm17	100	95.098	Jaculus_jaculus
ENSCPOG00000005679	RBM17	100	78.079	ENSKMAG00000021400	rbm17	100	78.554	Kryptolebias_marmoratus
ENSCPOG00000005679	RBM17	100	79.469	ENSLBEG00000000881	rbm17	100	75.943	Labrus_bergylta
ENSCPOG00000005679	RBM17	99	66.118	ENSLACG00000017297	RBM17	99	66.118	Latimeria_chalumnae
ENSCPOG00000005679	RBM17	100	82.238	ENSLOCG00000015659	rbm17	100	82.238	Lepisosteus_oculatus
ENSCPOG00000005679	RBM17	100	94.146	ENSLAFG00000011629	RBM17	100	94.146	Loxodonta_africana
ENSCPOG00000005679	RBM17	99	98.187	ENSMFAG00000035521	RBM17	100	98.187	Macaca_fascicularis
ENSCPOG00000005679	RBM17	100	94.118	ENSMMUG00000015152	RBM17	100	94.118	Macaca_mulatta
ENSCPOG00000005679	RBM17	99	98.187	ENSMNEG00000017264	RBM17	100	98.187	Macaca_nemestrina
ENSCPOG00000005679	RBM17	99	98.187	ENSMLEG00000029340	RBM17	100	98.187	Mandrillus_leucophaeus
ENSCPOG00000005679	RBM17	100	75.000	ENSMAMG00000000387	rbm17	100	76.982	Mastacembelus_armatus
ENSCPOG00000005679	RBM17	100	78.818	ENSMZEG00005015179	rbm17	100	79.800	Maylandia_zebra
ENSCPOG00000005679	RBM17	100	89.563	ENSMGAG00000003981	RBM17	100	89.563	Meleagris_gallopavo
ENSCPOG00000005679	RBM17	100	95.098	ENSMAUG00000019247	Rbm17	100	95.098	Mesocricetus_auratus
ENSCPOG00000005679	RBM17	100	94.059	ENSMICG00000003976	-	100	94.059	Microcebus_murinus
ENSCPOG00000005679	RBM17	100	87.136	ENSMICG00000041489	-	100	87.136	Microcebus_murinus
ENSCPOG00000005679	RBM17	92	80.548	ENSMOCG00000014517	-	99	80.274	Microtus_ochrogaster
ENSCPOG00000005679	RBM17	100	95.098	ENSMOCG00000011847	Rbm17	100	95.098	Microtus_ochrogaster
ENSCPOG00000005679	RBM17	100	74.334	ENSMMOG00000010264	rbm17	100	73.123	Mola_mola
ENSCPOG00000005679	RBM17	100	92.892	ENSMODG00000016648	RBM17	100	92.892	Monodelphis_domestica
ENSCPOG00000005679	RBM17	99	80.867	ENSMALG00000010597	rbm17	100	80.867	Monopterus_albus
ENSCPOG00000005679	RBM17	100	94.608	MGP_CAROLIEiJ_G0023173	Rbm17	100	94.608	Mus_caroli
ENSCPOG00000005679	RBM17	100	94.608	ENSMUSG00000037197	Rbm17	100	94.608	Mus_musculus
ENSCPOG00000005679	RBM17	100	94.363	MGP_PahariEiJ_G0019233	Rbm17	100	94.363	Mus_pahari
ENSCPOG00000005679	RBM17	100	94.608	MGP_SPRETEiJ_G0024091	Rbm17	100	94.608	Mus_spretus
ENSCPOG00000005679	RBM17	86	92.635	ENSMPUG00000016359	RBM17	97	92.635	Mustela_putorius_furo
ENSCPOG00000005679	RBM17	100	92.176	ENSMLUG00000002302	-	100	92.176	Myotis_lucifugus
ENSCPOG00000005679	RBM17	100	88.235	ENSMLUG00000025709	-	100	86.275	Myotis_lucifugus
ENSCPOG00000005679	RBM17	99	66.839	ENSNGAG00000000663	-	100	66.667	Nannospalax_galili
ENSCPOG00000005679	RBM17	100	95.098	ENSNGAG00000000741	Rbm17	100	95.098	Nannospalax_galili
ENSCPOG00000005679	RBM17	99	80.513	ENSNBRG00000018148	rbm17	100	80.513	Neolamprologus_brichardi
ENSCPOG00000005679	RBM17	100	94.789	ENSNLEG00000033350	RBM17	100	94.789	Nomascus_leucogenys
ENSCPOG00000005679	RBM17	100	87.010	ENSMEUG00000011347	RBM17	100	87.010	Notamacropus_eugenii
ENSCPOG00000005679	RBM17	100	81.327	ENSOPRG00000002993	RBM17	100	81.327	Ochotona_princeps
ENSCPOG00000005679	RBM17	97	75.131	ENSODEG00000007286	-	99	75.131	Octodon_degus
ENSCPOG00000005679	RBM17	100	94.866	ENSODEG00000004393	RBM17	100	94.866	Octodon_degus
ENSCPOG00000005679	RBM17	100	78.398	ENSONIG00000011838	rbm17	100	78.398	Oreochromis_niloticus
ENSCPOG00000005679	RBM17	100	92.157	ENSOANG00000015455	RBM17	100	92.157	Ornithorhynchus_anatinus
ENSCPOG00000005679	RBM17	99	79.500	ENSORLG00000028798	rbm17	100	80.392	Oryzias_latipes
ENSCPOG00000005679	RBM17	99	81.586	ENSORLG00020004593	rbm17	100	83.120	Oryzias_latipes_hni
ENSCPOG00000005679	RBM17	100	79.024	ENSORLG00015000033	rbm17	100	79.024	Oryzias_latipes_hsok
ENSCPOG00000005679	RBM17	100	75.943	ENSOMEG00000012060	rbm17	100	85.890	Oryzias_melastigma
ENSCPOG00000005679	RBM17	100	94.118	ENSOGAG00000015687	RBM17	100	94.118	Otolemur_garnettii
ENSCPOG00000005679	RBM17	100	93.627	ENSOARG00000012975	RBM17	100	93.627	Ovis_aries
ENSCPOG00000005679	RBM17	100	94.554	ENSPPAG00000032347	RBM17	100	94.554	Pan_paniscus
ENSCPOG00000005679	RBM17	100	94.118	ENSPPRG00000010706	RBM17	100	94.118	Panthera_pardus
ENSCPOG00000005679	RBM17	100	94.118	ENSPTIG00000007596	RBM17	100	94.118	Panthera_tigris_altaica
ENSCPOG00000005679	RBM17	100	94.554	ENSPTRG00000002265	RBM17	100	94.554	Pan_troglodytes
ENSCPOG00000005679	RBM17	99	98.187	ENSPANG00000023425	RBM17	100	98.187	Papio_anubis
ENSCPOG00000005679	RBM17	100	78.537	ENSPKIG00000025526	rbm17	100	78.293	Paramormyrops_kingsleyae
ENSCPOG00000005679	RBM17	99	77.411	ENSPKIG00000005048	-	100	76.650	Paramormyrops_kingsleyae
ENSCPOG00000005679	RBM17	100	88.592	ENSPSIG00000012332	RBM17	100	88.592	Pelodiscus_sinensis
ENSCPOG00000005679	RBM17	100	77.887	ENSPMGG00000007980	rbm17	100	77.970	Periophthalmus_magnuspinnatus
ENSCPOG00000005679	RBM17	100	95.098	ENSPEMG00000014320	Rbm17	100	95.098	Peromyscus_maniculatus_bairdii
ENSCPOG00000005679	RBM17	100	92.683	ENSPCIG00000019260	-	100	92.683	Phascolarctos_cinereus
ENSCPOG00000005679	RBM17	100	75.414	ENSPFOG00000013271	rbm17	100	75.414	Poecilia_formosa
ENSCPOG00000005679	RBM17	100	77.941	ENSPLAG00000004455	rbm17	100	78.922	Poecilia_latipinna
ENSCPOG00000005679	RBM17	100	78.293	ENSPMEG00000014864	rbm17	100	79.024	Poecilia_mexicana
ENSCPOG00000005679	RBM17	99	79.040	ENSPREG00000015589	rbm17	100	79.798	Poecilia_reticulata
ENSCPOG00000005679	RBM17	81	65.165	ENSPPYG00000019042	-	100	64.907	Pongo_abelii
ENSCPOG00000005679	RBM17	99	68.080	ENSPPYG00000019881	-	100	67.734	Pongo_abelii
ENSCPOG00000005679	RBM17	100	94.118	ENSPPYG00000002067	RBM17	100	94.118	Pongo_abelii
ENSCPOG00000005679	RBM17	100	86.275	ENSPCAG00000016879	RBM17	100	86.275	Procavia_capensis
ENSCPOG00000005679	RBM17	100	94.307	ENSPCOG00000027881	RBM17	100	95.190	Propithecus_coquereli
ENSCPOG00000005679	RBM17	100	82.598	ENSPVAG00000015499	RBM17	100	81.095	Pteropus_vampyrus
ENSCPOG00000005679	RBM17	99	79.016	ENSPNYG00000015274	rbm17	100	79.016	Pundamilia_nyererei
ENSCPOG00000005679	RBM17	100	76.847	ENSPNAG00000030046	rbm17	100	80.549	Pygocentrus_nattereri
ENSCPOG00000005679	RBM17	100	95.098	ENSRNOG00000018767	Rbm17	100	95.098	Rattus_norvegicus
ENSCPOG00000005679	RBM17	100	95.037	ENSRBIG00000043727	RBM17	100	95.037	Rhinopithecus_bieti
ENSCPOG00000005679	RBM17	99	98.187	ENSRROG00000044142	RBM17	100	98.187	Rhinopithecus_roxellana
ENSCPOG00000005679	RBM17	99	95.685	ENSSBOG00000031661	-	100	95.685	Saimiri_boliviensis_boliviensis
ENSCPOG00000005679	RBM17	100	83.130	ENSSBOG00000023653	-	100	83.130	Saimiri_boliviensis_boliviensis
ENSCPOG00000005679	RBM17	100	93.154	ENSSHAG00000012480	-	100	93.154	Sarcophilus_harrisii
ENSCPOG00000005679	RBM17	100	76.942	ENSSFOG00015009892	rbm17	100	76.942	Scleropages_formosus
ENSCPOG00000005679	RBM17	100	78.519	ENSSMAG00000012368	rbm17	100	79.487	Scophthalmus_maximus
ENSCPOG00000005679	RBM17	99	82.609	ENSSDUG00000015015	rbm17	100	82.609	Seriola_dumerili
ENSCPOG00000005679	RBM17	99	82.609	ENSSLDG00000014486	rbm17	100	82.609	Seriola_lalandi_dorsalis
ENSCPOG00000005679	RBM17	57	68.504	ENSSARG00000001792	-	100	68.504	Sorex_araneus
ENSCPOG00000005679	RBM17	99	89.951	ENSSPUG00000001036	RBM17	99	89.951	Sphenodon_punctatus
ENSCPOG00000005679	RBM17	100	78.624	ENSSPAG00000002338	rbm17	100	78.660	Stegastes_partitus
ENSCPOG00000005679	RBM17	100	93.382	ENSSSCG00000011134	RBM17	100	93.382	Sus_scrofa
ENSCPOG00000005679	RBM17	100	89.976	ENSTGUG00000002013	RBM17	100	89.976	Taeniopygia_guttata
ENSCPOG00000005679	RBM17	100	79.319	ENSTRUG00000010698	rbm17	100	77.506	Takifugu_rubripes
ENSCPOG00000005679	RBM17	100	80.535	ENSTNIG00000006892	rbm17	100	78.973	Tetraodon_nigroviridis
ENSCPOG00000005679	RBM17	100	74.815	ENSTBEG00000014686	RBM17	100	76.790	Tupaia_belangeri
ENSCPOG00000005679	RBM17	90	92.916	ENSTTRG00000001344	RBM17	100	92.916	Tursiops_truncatus
ENSCPOG00000005679	RBM17	100	94.541	ENSUAMG00000009499	RBM17	100	95.202	Ursus_americanus
ENSCPOG00000005679	RBM17	99	97.927	ENSUMAG00000012237	RBM17	100	97.927	Ursus_maritimus
ENSCPOG00000005679	RBM17	100	79.412	ENSVPAG00000005497	RBM17	100	79.412	Vicugna_pacos
ENSCPOG00000005679	RBM17	99	96.429	ENSVVUG00000006780	RBM17	100	96.429	Vulpes_vulpes
ENSCPOG00000005679	RBM17	99	82.338	ENSXETG00000018123	rbm17	100	82.338	Xenopus_tropicalis
ENSCPOG00000005679	RBM17	100	77.340	ENSXMAG00000008674	rbm17	100	77.340	Xiphophorus_maculatus