EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005705 (Gene tree)
Gene ID: 100712830
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 228476 bases
Position: chrDS562883.1:23896039-24124514
Accession: 100712830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027233	Ago_hook	PF10427.9	3.6e-20	1	1
ENSCPOP00000027840	Ago_hook	PF10427.9	5.5e-20	1	1
ENSCPOP00000005145	Ago_hook	PF10427.9	5.8e-20	1	1
ENSCPOP00000029929	Ago_hook	PF10427.9	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000041853	TNRC6B-202	7737	XM_013153092	ENSCPOP00000029929	1759 (aa)	XP_013008546	A0A286XXC2
ENSCPOT00000037852	TNRC6B-204	7332	XM_013153091	ENSCPOP00000027233	1776 (aa)	XP_013008545	A0A286XPA7
ENSCPOT00000040392	TNRC6B-201	7896	XM_013153090	ENSCPOP00000027840	1812 (aa)	XP_013008544	A0A286XQR7
ENSCPOT00000005767	TNRC6B-203	5421	-	ENSCPOP00000005145	1806 (aa)	-	H0V637

Gene Model

Click here to download ENSCPOG00000005705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005705	TNRC6B	70	38.366	ENSCPOG00000000467	TNRC6C	99	34.552
ENSCPOG00000005705	TNRC6B	99	37.875	ENSCPOG00000036684	TNRC6A	97	37.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005705	TNRC6B	98	96.935	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSCPOG00000005705	TNRC6B	99	91.046	ENSAMEG00000011025	TNRC6B	100	89.957	Ailuropoda_melanoleuca
ENSCPOG00000005705	TNRC6B	96	87.163	ENSAPLG00000009347	TNRC6B	100	87.456	Anas_platyrhynchos
ENSCPOG00000005705	TNRC6B	99	73.285	ENSACAG00000007281	TNRC6B	99	73.472	Anolis_carolinensis
ENSCPOG00000005705	TNRC6B	98	96.761	ENSANAG00000035042	TNRC6B	100	96.357	Aotus_nancymaae
ENSCPOG00000005705	TNRC6B	86	47.574	ENSAMXG00000008707	tnrc6b	82	46.293	Astyanax_mexicanus
ENSCPOG00000005705	TNRC6B	100	94.223	ENSBTAG00000021076	TNRC6B	99	94.532	Bos_taurus
ENSCPOG00000005705	TNRC6B	98	95.759	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSCPOG00000005705	TNRC6B	98	96.470	ENSCAFG00000001255	TNRC6B	100	96.470	Canis_familiaris
ENSCPOG00000005705	TNRC6B	99	96.656	ENSCAFG00020002189	TNRC6B	99	96.656	Canis_lupus_dingo
ENSCPOG00000005705	TNRC6B	99	94.383	ENSCHIG00000003491	TNRC6B	100	94.549	Capra_hircus
ENSCPOG00000005705	TNRC6B	98	96.588	ENSTSYG00000011836	TNRC6B	100	95.652	Carlito_syrichta
ENSCPOG00000005705	TNRC6B	98	95.195	ENSCCAG00000019912	TNRC6B	97	96.605	Cebus_capucinus
ENSCPOG00000005705	TNRC6B	98	96.793	ENSCATG00000029291	TNRC6B	99	96.793	Cercocebus_atys
ENSCPOG00000005705	TNRC6B	100	98.673	ENSCLAG00000016942	TNRC6B	100	98.673	Chinchilla_lanigera
ENSCPOG00000005705	TNRC6B	99	92.499	ENSCSAG00000006021	TNRC6B	99	92.555	Chlorocebus_sabaeus
ENSCPOG00000005705	TNRC6B	91	84.890	ENSCPBG00000022932	TNRC6B	99	85.128	Chrysemys_picta_bellii
ENSCPOG00000005705	TNRC6B	99	95.970	ENSCANG00000030776	TNRC6B	100	96.009	Colobus_angolensis_palliatus
ENSCPOG00000005705	TNRC6B	96	95.252	ENSCGRG00001020166	Tnrc6b	99	95.080	Cricetulus_griseus_chok1gshd
ENSCPOG00000005705	TNRC6B	100	95.207	ENSCGRG00000016696	Tnrc6b	99	95.136	Cricetulus_griseus_crigri
ENSCPOG00000005705	TNRC6B	100	95.052	ENSDNOG00000012744	TNRC6B	100	95.103	Dasypus_novemcinctus
ENSCPOG00000005705	TNRC6B	100	96.694	ENSDORG00000003386	Tnrc6b	100	96.694	Dipodomys_ordii
ENSCPOG00000005705	TNRC6B	97	86.845	ENSETEG00000006570	TNRC6B	99	87.253	Echinops_telfairi
ENSCPOG00000005705	TNRC6B	100	96.241	ENSEASG00005005306	TNRC6B	100	96.241	Equus_asinus_asinus
ENSCPOG00000005705	TNRC6B	100	96.701	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSCPOG00000005705	TNRC6B	57	97.070	ENSEEUG00000008690	-	59	97.070	Erinaceus_europaeus
ENSCPOG00000005705	TNRC6B	100	96.429	ENSFCAG00000004791	TNRC6B	100	96.429	Felis_catus
ENSCPOG00000005705	TNRC6B	95	87.485	ENSFALG00000012195	TNRC6B	100	87.368	Ficedula_albicollis
ENSCPOG00000005705	TNRC6B	100	98.071	ENSFDAG00000021368	TNRC6B	100	98.071	Fukomys_damarensis
ENSCPOG00000005705	TNRC6B	99	88.394	ENSGALG00000012050	TNRC6B	97	88.338	Gallus_gallus
ENSCPOG00000005705	TNRC6B	99	87.472	ENSGAGG00000025188	TNRC6B	98	87.416	Gopherus_agassizii
ENSCPOG00000005705	TNRC6B	99	96.193	ENSGGOG00000008444	TNRC6B	100	96.475	Gorilla_gorilla
ENSCPOG00000005705	TNRC6B	100	98.238	ENSHGLG00000009306	TNRC6B	100	98.238	Heterocephalus_glaber_female
ENSCPOG00000005705	TNRC6B	100	97.960	ENSHGLG00100018108	TNRC6B	100	97.988	Heterocephalus_glaber_male
ENSCPOG00000005705	TNRC6B	80	44.453	ENSIPUG00000001515	tnrc6b	93	46.009	Ictalurus_punctatus
ENSCPOG00000005705	TNRC6B	100	96.915	ENSSTOG00000008927	TNRC6B	100	96.915	Ictidomys_tridecemlineatus
ENSCPOG00000005705	TNRC6B	100	95.314	ENSJJAG00000015779	Tnrc6b	100	95.094	Jaculus_jaculus
ENSCPOG00000005705	TNRC6B	99	61.450	ENSLACG00000000628	-	99	61.753	Latimeria_chalumnae
ENSCPOG00000005705	TNRC6B	78	94.851	ENSLAFG00000014473	TNRC6B	99	94.851	Loxodonta_africana
ENSCPOG00000005705	TNRC6B	98	97.072	ENSMFAG00000003862	TNRC6B	99	96.907	Macaca_fascicularis
ENSCPOG00000005705	TNRC6B	100	97.033	ENSMMUG00000021345	TNRC6B	100	96.244	Macaca_mulatta
ENSCPOG00000005705	TNRC6B	99	96.896	ENSMNEG00000042745	TNRC6B	100	96.896	Macaca_nemestrina
ENSCPOG00000005705	TNRC6B	98	96.907	ENSMLEG00000041780	TNRC6B	100	96.244	Mandrillus_leucophaeus
ENSCPOG00000005705	TNRC6B	99	84.753	ENSMGAG00000012333	TNRC6B	64	82.862	Meleagris_gallopavo
ENSCPOG00000005705	TNRC6B	100	94.105	ENSMAUG00000016123	Tnrc6b	98	95.192	Mesocricetus_auratus
ENSCPOG00000005705	TNRC6B	99	96.669	ENSMICG00000014056	TNRC6B	100	96.669	Microcebus_murinus
ENSCPOG00000005705	TNRC6B	97	96.000	ENSMOCG00000020334	Tnrc6b	100	96.000	Microtus_ochrogaster
ENSCPOG00000005705	TNRC6B	100	95.427	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	95.372	Mus_caroli
ENSCPOG00000005705	TNRC6B	100	95.372	ENSMUSG00000047888	Tnrc6b	100	95.317	Mus_musculus
ENSCPOG00000005705	TNRC6B	100	95.204	MGP_PahariEiJ_G0020045	Tnrc6b	100	95.149	Mus_pahari
ENSCPOG00000005705	TNRC6B	100	95.592	MGP_SPRETEiJ_G0020941	Tnrc6b	100	95.537	Mus_spretus
ENSCPOG00000005705	TNRC6B	96	96.780	ENSMPUG00000016442	TNRC6B	99	86.491	Mustela_putorius_furo
ENSCPOG00000005705	TNRC6B	99	90.586	ENSMLUG00000008765	TNRC6B	99	89.591	Myotis_lucifugus
ENSCPOG00000005705	TNRC6B	100	96.311	ENSNGAG00000021294	Tnrc6b	100	96.311	Nannospalax_galili
ENSCPOG00000005705	TNRC6B	88	94.718	ENSNLEG00000015311	TNRC6B	100	96.710	Nomascus_leucogenys
ENSCPOG00000005705	TNRC6B	91	93.278	ENSOPRG00000012054	TNRC6B	88	93.353	Ochotona_princeps
ENSCPOG00000005705	TNRC6B	100	98.842	ENSODEG00000013146	TNRC6B	100	98.842	Octodon_degus
ENSCPOG00000005705	TNRC6B	50	46.727	ENSONIG00000019679	-	99	41.438	Oreochromis_niloticus
ENSCPOG00000005705	TNRC6B	100	95.162	ENSOCUG00000016128	TNRC6B	100	94.997	Oryctolagus_cuniculus
ENSCPOG00000005705	TNRC6B	100	91.594	ENSOGAG00000011096	TNRC6B	100	90.698	Otolemur_garnettii
ENSCPOG00000005705	TNRC6B	100	94.740	ENSOARG00000017238	TNRC6B	100	94.575	Ovis_aries
ENSCPOG00000005705	TNRC6B	99	96.091	ENSPPAG00000028514	TNRC6B	100	96.118	Pan_paniscus
ENSCPOG00000005705	TNRC6B	98	96.067	ENSPPRG00000017741	TNRC6B	100	95.897	Panthera_pardus
ENSCPOG00000005705	TNRC6B	97	89.879	ENSPTIG00000022064	TNRC6B	98	92.080	Panthera_tigris_altaica
ENSCPOG00000005705	TNRC6B	98	96.935	ENSPTRG00000047826	TNRC6B	100	96.475	Pan_troglodytes
ENSCPOG00000005705	TNRC6B	96	91.091	ENSPANG00000009271	TNRC6B	99	95.726	Papio_anubis
ENSCPOG00000005705	TNRC6B	99	87.634	ENSPSIG00000005318	TNRC6B	99	87.690	Pelodiscus_sinensis
ENSCPOG00000005705	TNRC6B	100	95.537	ENSPEMG00000011403	Tnrc6b	100	95.482	Peromyscus_maniculatus_bairdii
ENSCPOG00000005705	TNRC6B	98	85.876	ENSPCIG00000020347	TNRC6B	99	86.103	Phascolarctos_cinereus
ENSCPOG00000005705	TNRC6B	99	39.117	ENSPFOG00000006033	-	96	42.435	Poecilia_formosa
ENSCPOG00000005705	TNRC6B	78	53.808	ENSPMEG00000006371	-	84	54.502	Poecilia_mexicana
ENSCPOG00000005705	TNRC6B	98	96.703	ENSPPYG00000011849	TNRC6B	99	96.703	Pongo_abelii
ENSCPOG00000005705	TNRC6B	76	92.387	ENSPCAG00000008739	TNRC6B	77	91.215	Procavia_capensis
ENSCPOG00000005705	TNRC6B	99	96.075	ENSPCOG00000020790	TNRC6B	100	96.475	Propithecus_coquereli
ENSCPOG00000005705	TNRC6B	93	95.488	ENSPVAG00000004975	TNRC6B	94	95.488	Pteropus_vampyrus
ENSCPOG00000005705	TNRC6B	62	65.079	ENSPNAG00000011713	tnrc6b	72	46.631	Pygocentrus_nattereri
ENSCPOG00000005705	TNRC6B	100	94.893	ENSRNOG00000024907	Tnrc6b	100	94.673	Rattus_norvegicus
ENSCPOG00000005705	TNRC6B	98	96.532	ENSRBIG00000035576	TNRC6B	99	96.532	Rhinopithecus_bieti
ENSCPOG00000005705	TNRC6B	99	96.558	ENSRROG00000031135	TNRC6B	100	96.558	Rhinopithecus_roxellana
ENSCPOG00000005705	TNRC6B	97	96.682	ENSSBOG00000029743	TNRC6B	100	96.682	Saimiri_boliviensis_boliviensis
ENSCPOG00000005705	TNRC6B	99	82.190	ENSSHAG00000009692	TNRC6B	99	81.399	Sarcophilus_harrisii
ENSCPOG00000005705	TNRC6B	70	84.967	ENSSARG00000007971	-	73	84.746	Sorex_araneus
ENSCPOG00000005705	TNRC6B	91	82.405	ENSSPUG00000010801	TNRC6B	99	89.815	Sphenodon_punctatus
ENSCPOG00000005705	TNRC6B	100	95.217	ENSSSCG00000000078	TNRC6B	99	95.260	Sus_scrofa
ENSCPOG00000005705	TNRC6B	91	86.584	ENSTGUG00000010138	-	99	86.398	Taeniopygia_guttata
ENSCPOG00000005705	TNRC6B	100	92.582	ENSTTRG00000011465	TNRC6B	100	92.469	Tursiops_truncatus
ENSCPOG00000005705	TNRC6B	100	94.030	ENSUAMG00000007174	TNRC6B	99	94.581	Ursus_americanus
ENSCPOG00000005705	TNRC6B	99	96.104	ENSUMAG00000014336	TNRC6B	100	96.104	Ursus_maritimus
ENSCPOG00000005705	TNRC6B	68	90.707	ENSVPAG00000001467	TNRC6B	75	89.495	Vicugna_pacos
ENSCPOG00000005705	TNRC6B	100	96.601	ENSVVUG00000007064	TNRC6B	100	96.601	Vulpes_vulpes