EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005855 (Gene tree)
Gene ID: 100722157
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 9671 bases
Position: chrDS562893.1:2019152-2028822
Accession: 100722157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026105	Ribonuc_P_40	PF08584.11	2.3e-94	1	1
ENSCPOP00000005283	Ribonuc_P_40	PF08584.11	2.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000005918	RPP40-202	1023	-	ENSCPOP00000005283	340 (aa)	-	H0V6G4
ENSCPOT00000043982	RPP40-201	1859	XM_003468830	ENSCPOP00000026105	363 (aa)	XP_003468878	A0A286XKR9

Gene Model

Click here to download ENSCPOG00000005855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005855	RPP40	100	85.399	ENSG00000124787	RPP40	100	86.139	Homo_sapiens
ENSCPOG00000005855	RPP40	88	32.776	ENSAPOG00000008660	rpp40	92	32.776	Acanthochromis_polyacanthus
ENSCPOG00000005855	RPP40	100	86.777	ENSAMEG00000012938	RPP40	100	86.777	Ailuropoda_melanoleuca
ENSCPOG00000005855	RPP40	98	36.415	ENSACIG00000003617	rpp40	98	36.415	Amphilophus_citrinellus
ENSCPOG00000005855	RPP40	98	38.655	ENSAOCG00000011846	rpp40	99	38.655	Amphiprion_ocellaris
ENSCPOG00000005855	RPP40	98	38.655	ENSAPEG00000001322	rpp40	99	38.655	Amphiprion_percula
ENSCPOG00000005855	RPP40	98	39.276	ENSATEG00000006584	rpp40	99	39.276	Anabas_testudineus
ENSCPOG00000005855	RPP40	83	69.205	ENSAPLG00000005691	RPP40	99	69.205	Anas_platyrhynchos
ENSCPOG00000005855	RPP40	99	64.903	ENSACAG00000006550	RPP40	88	64.903	Anolis_carolinensis
ENSCPOG00000005855	RPP40	100	83.196	ENSANAG00000029246	RPP40	100	83.196	Aotus_nancymaae
ENSCPOG00000005855	RPP40	97	38.746	ENSACLG00000015883	rpp40	95	38.746	Astatotilapia_calliptera
ENSCPOG00000005855	RPP40	98	48.179	ENSAMXG00000001755	rpp40	99	48.179	Astyanax_mexicanus
ENSCPOG00000005855	RPP40	100	82.920	ENSBTAG00000003332	RPP40	100	82.920	Bos_taurus
ENSCPOG00000005855	RPP40	100	83.747	ENSCJAG00000021373	RPP40	100	83.747	Callithrix_jacchus
ENSCPOG00000005855	RPP40	100	86.501	ENSCAFG00000009435	RPP40	100	86.501	Canis_familiaris
ENSCPOG00000005855	RPP40	100	86.501	ENSCAFG00020013380	RPP40	100	86.501	Canis_lupus_dingo
ENSCPOG00000005855	RPP40	100	82.645	ENSCHIG00000016849	RPP40	100	82.645	Capra_hircus
ENSCPOG00000005855	RPP40	100	85.950	ENSTSYG00000032857	RPP40	100	86.139	Carlito_syrichta
ENSCPOG00000005855	RPP40	90	90.826	ENSCAPG00000004957	RPP40	98	90.826	Cavia_aperea
ENSCPOG00000005855	RPP40	100	84.848	ENSCCAG00000019809	RPP40	100	84.848	Cebus_capucinus
ENSCPOG00000005855	RPP40	100	84.573	ENSCATG00000038787	RPP40	100	84.573	Cercocebus_atys
ENSCPOG00000005855	RPP40	100	91.765	ENSCLAG00000003235	RPP40	100	91.765	Chinchilla_lanigera
ENSCPOG00000005855	RPP40	100	84.848	ENSCSAG00000007307	RPP40	100	84.848	Chlorocebus_sabaeus
ENSCPOG00000005855	RPP40	74	66.800	ENSCHOG00000005856	-	100	66.800	Choloepus_hoffmanni
ENSCPOG00000005855	RPP40	99	70.000	ENSCPBG00000009003	RPP40	99	70.000	Chrysemys_picta_bellii
ENSCPOG00000005855	RPP40	100	85.124	ENSCANG00000033965	RPP40	100	85.124	Colobus_angolensis_palliatus
ENSCPOG00000005855	RPP40	100	80.716	ENSCGRG00001018328	Rpp40	100	80.716	Cricetulus_griseus_chok1gshd
ENSCPOG00000005855	RPP40	100	80.716	ENSCGRG00000011344	Rpp40	100	80.716	Cricetulus_griseus_crigri
ENSCPOG00000005855	RPP40	98	36.236	ENSCSEG00000015006	-	98	36.236	Cynoglossus_semilaevis
ENSCPOG00000005855	RPP40	74	35.294	ENSCVAG00000012169	rpp40	100	35.294	Cyprinodon_variegatus
ENSCPOG00000005855	RPP40	98	50.000	ENSDARG00000017605	rpp40	99	50.000	Danio_rerio
ENSCPOG00000005855	RPP40	82	79.125	ENSDNOG00000048136	RPP40	99	79.125	Dasypus_novemcinctus
ENSCPOG00000005855	RPP40	100	82.645	ENSDORG00000029944	-	100	82.645	Dipodomys_ordii
ENSCPOG00000005855	RPP40	100	62.198	ENSDORG00000011196	-	100	62.198	Dipodomys_ordii
ENSCPOG00000005855	RPP40	100	66.667	ENSETEG00000007458	RPP40	100	66.667	Echinops_telfairi
ENSCPOG00000005855	RPP40	98	44.507	ENSEBUG00000000386	rpp40	99	44.507	Eptatretus_burgeri
ENSCPOG00000005855	RPP40	100	85.399	ENSEASG00005012116	RPP40	80	85.399	Equus_asinus_asinus
ENSCPOG00000005855	RPP40	100	85.675	ENSECAG00000017247	RPP40	80	85.675	Equus_caballus
ENSCPOG00000005855	RPP40	68	82.927	ENSEEUG00000012087	RPP40	100	64.310	Erinaceus_europaeus
ENSCPOG00000005855	RPP40	99	48.468	ENSELUG00000017004	rpp40	99	48.468	Esox_lucius
ENSCPOG00000005855	RPP40	100	85.675	ENSFCAG00000009249	RPP40	100	85.675	Felis_catus
ENSCPOG00000005855	RPP40	86	66.667	ENSFALG00000013166	RPP40	100	66.667	Ficedula_albicollis
ENSCPOG00000005855	RPP40	100	89.807	ENSFDAG00000013001	-	100	89.807	Fukomys_damarensis
ENSCPOG00000005855	RPP40	81	72.203	ENSFDAG00000000265	-	100	72.203	Fukomys_damarensis
ENSCPOG00000005855	RPP40	98	41.176	ENSFHEG00000021429	rpp40	88	41.176	Fundulus_heteroclitus
ENSCPOG00000005855	RPP40	89	40.062	ENSGMOG00000018653	rpp40	100	40.062	Gadus_morhua
ENSCPOG00000005855	RPP40	99	66.389	ENSGALG00000036074	RPP40	99	66.389	Gallus_gallus
ENSCPOG00000005855	RPP40	82	34.899	ENSGAFG00000004189	-	98	34.899	Gambusia_affinis
ENSCPOG00000005855	RPP40	98	39.216	ENSGACG00000002472	rpp40	99	39.216	Gasterosteus_aculeatus
ENSCPOG00000005855	RPP40	99	70.833	ENSGAGG00000012918	RPP40	99	70.833	Gopherus_agassizii
ENSCPOG00000005855	RPP40	100	85.124	ENSGGOG00000013764	RPP40	100	85.124	Gorilla_gorilla
ENSCPOG00000005855	RPP40	90	38.226	ENSHBUG00000009378	rpp40	93	38.226	Haplochromis_burtoni
ENSCPOG00000005855	RPP40	100	89.807	ENSHGLG00000004871	RPP40	100	89.807	Heterocephalus_glaber_female
ENSCPOG00000005855	RPP40	100	90.083	ENSHGLG00100002080	RPP40	100	90.083	Heterocephalus_glaber_male
ENSCPOG00000005855	RPP40	95	33.526	ENSHCOG00000013264	-	92	33.526	Hippocampus_comes
ENSCPOG00000005855	RPP40	99	46.667	ENSIPUG00000008951	RPP40	99	46.667	Ictalurus_punctatus
ENSCPOG00000005855	RPP40	100	85.675	ENSSTOG00000011199	RPP40	100	85.675	Ictidomys_tridecemlineatus
ENSCPOG00000005855	RPP40	100	81.471	ENSJJAG00000020629	Rpp40	100	81.471	Jaculus_jaculus
ENSCPOG00000005855	RPP40	98	38.095	ENSKMAG00000019358	rpp40	99	38.095	Kryptolebias_marmoratus
ENSCPOG00000005855	RPP40	98	40.896	ENSLBEG00000022724	rpp40	99	40.896	Labrus_bergylta
ENSCPOG00000005855	RPP40	99	61.389	ENSLACG00000014848	RPP40	99	61.389	Latimeria_chalumnae
ENSCPOG00000005855	RPP40	100	53.994	ENSLOCG00000011650	rpp40	100	53.994	Lepisosteus_oculatus
ENSCPOG00000005855	RPP40	83	83.828	ENSLAFG00000007530	RPP40	100	83.828	Loxodonta_africana
ENSCPOG00000005855	RPP40	100	84.573	ENSMFAG00000043100	RPP40	100	84.573	Macaca_fascicularis
ENSCPOG00000005855	RPP40	100	84.298	ENSMMUG00000004966	RPP40	100	84.298	Macaca_mulatta
ENSCPOG00000005855	RPP40	100	85.124	ENSMNEG00000041986	RPP40	100	85.809	Macaca_nemestrina
ENSCPOG00000005855	RPP40	98	75.821	ENSMLEG00000040851	RPP40	100	83.523	Mandrillus_leucophaeus
ENSCPOG00000005855	RPP40	98	40.282	ENSMAMG00000019551	rpp40	98	40.282	Mastacembelus_armatus
ENSCPOG00000005855	RPP40	98	39.216	ENSMZEG00005019475	rpp40	99	39.216	Maylandia_zebra
ENSCPOG00000005855	RPP40	89	68.944	ENSMGAG00000004009	RPP40	89	68.944	Meleagris_gallopavo
ENSCPOG00000005855	RPP40	100	83.529	ENSMAUG00000010268	Rpp40	100	83.529	Mesocricetus_auratus
ENSCPOG00000005855	RPP40	100	85.950	ENSMICG00000003297	RPP40	100	85.588	Microcebus_murinus
ENSCPOG00000005855	RPP40	100	83.824	ENSMOCG00000000305	Rpp40	100	83.824	Microtus_ochrogaster
ENSCPOG00000005855	RPP40	98	35.799	ENSMMOG00000020591	-	99	35.799	Mola_mola
ENSCPOG00000005855	RPP40	100	79.396	ENSMODG00000009826	RPP40	100	79.396	Monodelphis_domestica
ENSCPOG00000005855	RPP40	98	39.216	ENSMALG00000020133	rpp40	99	39.216	Monopterus_albus
ENSCPOG00000005855	RPP40	100	84.412	MGP_CAROLIEiJ_G0018429	Rpp40	100	84.412	Mus_caroli
ENSCPOG00000005855	RPP40	100	85.294	ENSMUSG00000021418	Rpp40	100	85.294	Mus_musculus
ENSCPOG00000005855	RPP40	100	84.118	MGP_PahariEiJ_G0019497	Rpp40	100	84.118	Mus_pahari
ENSCPOG00000005855	RPP40	100	84.706	MGP_SPRETEiJ_G0019309	Rpp40	100	84.706	Mus_spretus
ENSCPOG00000005855	RPP40	100	85.399	ENSMPUG00000000530	RPP40	93	85.399	Mustela_putorius_furo
ENSCPOG00000005855	RPP40	100	84.848	ENSMLUG00000000501	RPP40	100	84.848	Myotis_lucifugus
ENSCPOG00000005855	RPP40	100	85.399	ENSNGAG00000023955	-	100	85.399	Nannospalax_galili
ENSCPOG00000005855	RPP40	95	75.723	ENSNGAG00000022529	-	100	75.723	Nannospalax_galili
ENSCPOG00000005855	RPP40	87	37.000	ENSNBRG00000017465	rpp40	86	37.171	Neolamprologus_brichardi
ENSCPOG00000005855	RPP40	100	84.573	ENSNLEG00000034397	RPP40	100	84.573	Nomascus_leucogenys
ENSCPOG00000005855	RPP40	100	73.829	ENSMEUG00000005300	RPP40	100	73.829	Notamacropus_eugenii
ENSCPOG00000005855	RPP40	100	83.471	ENSODEG00000018153	-	100	83.471	Octodon_degus
ENSCPOG00000005855	RPP40	100	87.879	ENSODEG00000007255	-	100	87.879	Octodon_degus
ENSCPOG00000005855	RPP40	88	88.629	ENSODEG00000006170	-	100	88.629	Octodon_degus
ENSCPOG00000005855	RPP40	98	39.216	ENSONIG00000014016	rpp40	98	39.216	Oreochromis_niloticus
ENSCPOG00000005855	RPP40	83	73.597	ENSOANG00000001200	RPP40	99	73.597	Ornithorhynchus_anatinus
ENSCPOG00000005855	RPP40	99	74.515	ENSOCUG00000000354	RPP40	99	74.515	Oryctolagus_cuniculus
ENSCPOG00000005855	RPP40	99	38.333	ENSORLG00000008242	-	100	38.333	Oryzias_latipes
ENSCPOG00000005855	RPP40	99	38.333	ENSORLG00020013745	-	91	38.333	Oryzias_latipes_hni
ENSCPOG00000005855	RPP40	99	38.611	ENSORLG00015000887	-	100	38.611	Oryzias_latipes_hsok
ENSCPOG00000005855	RPP40	99	39.335	ENSOMEG00000002747	rpp40	100	39.335	Oryzias_melastigma
ENSCPOG00000005855	RPP40	100	85.950	ENSOGAG00000006055	RPP40	100	85.950	Otolemur_garnettii
ENSCPOG00000005855	RPP40	91	80.180	ENSOARG00000018783	RPP40	100	82.508	Ovis_aries
ENSCPOG00000005855	RPP40	100	84.573	ENSPPAG00000023703	RPP40	100	84.573	Pan_paniscus
ENSCPOG00000005855	RPP40	100	85.399	ENSPPRG00000005612	RPP40	100	85.399	Panthera_pardus
ENSCPOG00000005855	RPP40	100	79.890	ENSPTIG00000018847	RPP40	100	79.890	Panthera_tigris_altaica
ENSCPOG00000005855	RPP40	100	84.848	ENSPTRG00000017690	RPP40	100	84.848	Pan_troglodytes
ENSCPOG00000005855	RPP40	100	85.124	ENSPANG00000017865	RPP40	100	85.124	Papio_anubis
ENSCPOG00000005855	RPP40	98	50.838	ENSPKIG00000006311	rpp40	99	50.838	Paramormyrops_kingsleyae
ENSCPOG00000005855	RPP40	65	72.072	ENSPSIG00000007854	RPP40	100	72.072	Pelodiscus_sinensis
ENSCPOG00000005855	RPP40	93	79.114	ENSPEMG00000020809	Rpp40	92	79.114	Peromyscus_maniculatus_bairdii
ENSCPOG00000005855	RPP40	75	46.715	ENSPMAG00000008412	rpp40	99	46.715	Petromyzon_marinus
ENSCPOG00000005855	RPP40	100	80.165	ENSPCIG00000010682	RPP40	100	80.165	Phascolarctos_cinereus
ENSCPOG00000005855	RPP40	98	37.047	ENSPFOG00000011460	rpp40	98	37.047	Poecilia_formosa
ENSCPOG00000005855	RPP40	98	37.535	ENSPLAG00000001334	rpp40	99	37.535	Poecilia_latipinna
ENSCPOG00000005855	RPP40	98	37.255	ENSPMEG00000007721	rpp40	99	37.255	Poecilia_mexicana
ENSCPOG00000005855	RPP40	98	37.815	ENSPREG00000009215	rpp40	99	37.815	Poecilia_reticulata
ENSCPOG00000005855	RPP40	100	85.399	ENSPPYG00000016194	RPP40	100	85.399	Pongo_abelii
ENSCPOG00000005855	RPP40	51	83.152	ENSPCAG00000002700	-	99	83.152	Procavia_capensis
ENSCPOG00000005855	RPP40	100	86.226	ENSPCOG00000003907	RPP40	100	86.226	Propithecus_coquereli
ENSCPOG00000005855	RPP40	100	85.675	ENSPVAG00000011325	RPP40	100	85.675	Pteropus_vampyrus
ENSCPOG00000005855	RPP40	82	38.591	ENSPNYG00000004432	rpp40	98	38.591	Pundamilia_nyererei
ENSCPOG00000005855	RPP40	97	47.875	ENSPNAG00000019125	rpp40	98	47.875	Pygocentrus_nattereri
ENSCPOG00000005855	RPP40	100	83.747	ENSRNOG00000016226	Rpp40	100	83.747	Rattus_norvegicus
ENSCPOG00000005855	RPP40	100	85.399	ENSRBIG00000035800	RPP40	100	86.139	Rhinopithecus_bieti
ENSCPOG00000005855	RPP40	100	85.399	ENSRROG00000039116	RPP40	100	85.399	Rhinopithecus_roxellana
ENSCPOG00000005855	RPP40	100	83.471	ENSSBOG00000020297	RPP40	100	83.471	Saimiri_boliviensis_boliviensis
ENSCPOG00000005855	RPP40	77	76.978	ENSSHAG00000002102	RPP40	100	76.978	Sarcophilus_harrisii
ENSCPOG00000005855	RPP40	99	50.413	ENSSFOG00015001142	rpp40	81	50.413	Scleropages_formosus
ENSCPOG00000005855	RPP40	98	39.216	ENSSDUG00000007202	rpp40	99	39.216	Seriola_dumerili
ENSCPOG00000005855	RPP40	98	38.936	ENSSLDG00000017563	rpp40	99	38.936	Seriola_lalandi_dorsalis
ENSCPOG00000005855	RPP40	81	68.136	ENSSPUG00000018950	-	100	68.136	Sphenodon_punctatus
ENSCPOG00000005855	RPP40	99	68.056	ENSSPUG00000017487	-	99	68.056	Sphenodon_punctatus
ENSCPOG00000005855	RPP40	98	40.563	ENSSPAG00000022716	rpp40	98	40.563	Stegastes_partitus
ENSCPOG00000005855	RPP40	100	80.716	ENSSSCG00000000998	RPP40	100	80.716	Sus_scrofa
ENSCPOG00000005855	RPP40	98	67.507	ENSTGUG00000002258	-	99	67.507	Taeniopygia_guttata
ENSCPOG00000005855	RPP40	52	73.446	ENSTGUG00000015246	-	100	73.446	Taeniopygia_guttata
ENSCPOG00000005855	RPP40	97	39.943	ENSTRUG00000003755	rpp40	98	39.943	Takifugu_rubripes
ENSCPOG00000005855	RPP40	97	38.244	ENSTNIG00000003077	rpp40	98	38.244	Tetraodon_nigroviridis
ENSCPOG00000005855	RPP40	74	61.200	ENSTBEG00000014467	-	73	61.200	Tupaia_belangeri
ENSCPOG00000005855	RPP40	99	76.796	ENSTTRG00000007319	RPP40	100	76.796	Tursiops_truncatus
ENSCPOG00000005855	RPP40	100	86.777	ENSUAMG00000002159	RPP40	100	86.777	Ursus_americanus
ENSCPOG00000005855	RPP40	100	86.777	ENSUMAG00000018639	RPP40	94	86.777	Ursus_maritimus
ENSCPOG00000005855	RPP40	79	63.158	ENSVPAG00000004652	-	96	63.158	Vicugna_pacos
ENSCPOG00000005855	RPP40	100	86.226	ENSVVUG00000005451	RPP40	100	86.226	Vulpes_vulpes
ENSCPOG00000005855	RPP40	99	53.973	ENSXETG00000017617	rpp40	100	53.973	Xenopus_tropicalis
ENSCPOG00000005855	RPP40	52	47.170	ENSXCOG00000019991	-	80	31.269	Xiphophorus_couchianus
ENSCPOG00000005855	RPP40	98	33.333	ENSXMAG00000024940	rpp40	98	33.048	Xiphophorus_maculatus