EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000005901 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 15235 bases
Position: chrDS562882.1:2403324-2418558
Accession: 100731018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005323	zf-C2H2	PF00096.26	6.3e-10	1	2
ENSCPOP00000005323	zf-C2H2	PF00096.26	6.3e-10	2	2
ENSCPOP00000005323	zf-met	PF12874.7	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000005964	PRDM12-201	1486	XM_005008485	ENSCPOP00000005323	329 (aa)	XP_005008542	H0V6K2

Gene Model

Click here to download ENSCPOG00000005901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000005901	PRDM12	62	47.222	ENSCPOG00000012883	PRDM5	90	47.222
ENSCPOG00000005901	PRDM12	72	37.647	ENSCPOG00000025271	ZFP64	54	37.647
ENSCPOG00000005901	PRDM12	93	34.884	ENSCPOG00000027176	PRDM14	76	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005901	PRDM12	95	97.444	ENSG00000130711	PRDM12	93	91.765	Homo_sapiens
ENSCPOG00000005901	PRDM12	95	79.580	ENSAPOG00000016051	prdm12b	87	79.580	Acanthochromis_polyacanthus
ENSCPOG00000005901	PRDM12	95	66.134	ENSAPOG00000018234	-	88	66.055	Acanthochromis_polyacanthus
ENSCPOG00000005901	PRDM12	98	91.641	ENSAMEG00000016234	PRDM12	96	94.534	Ailuropoda_melanoleuca
ENSCPOG00000005901	PRDM12	95	80.183	ENSACIG00000019578	prdm12b	87	80.183	Amphilophus_citrinellus
ENSCPOG00000005901	PRDM12	95	79.042	ENSACIG00000005193	-	88	78.743	Amphilophus_citrinellus
ENSCPOG00000005901	PRDM12	95	81.155	ENSAOCG00000015040	prdm12b	86	81.155	Amphiprion_ocellaris
ENSCPOG00000005901	PRDM12	95	81.902	ENSAPEG00000015092	prdm12b	86	81.902	Amphiprion_percula
ENSCPOG00000005901	PRDM12	95	78.086	ENSAPEG00000022849	-	83	78.395	Amphiprion_percula
ENSCPOG00000005901	PRDM12	95	80.818	ENSATEG00000014595	-	93	80.818	Anabas_testudineus
ENSCPOG00000005901	PRDM12	100	91.765	ENSANAG00000020616	PRDM12	100	91.765	Aotus_nancymaae
ENSCPOG00000005901	PRDM12	95	80.909	ENSACLG00000007631	-	89	77.714	Astatotilapia_calliptera
ENSCPOG00000005901	PRDM12	95	82.857	ENSACLG00000011876	prdm12b	86	82.857	Astatotilapia_calliptera
ENSCPOG00000005901	PRDM12	95	88.050	ENSAMXG00000033665	prdm12b	86	88.050	Astyanax_mexicanus
ENSCPOG00000005901	PRDM12	99	79.167	ENSAMXG00000008540	PRDM12	93	79.167	Astyanax_mexicanus
ENSCPOG00000005901	PRDM12	95	97.764	ENSBTAG00000023797	PRDM12	94	92.059	Bos_taurus
ENSCPOG00000005901	PRDM12	95	97.444	ENSCJAG00000020540	PRDM12	94	91.765	Callithrix_jacchus
ENSCPOG00000005901	PRDM12	82	96.667	ENSCAFG00000023076	PRDM12	92	90.236	Canis_familiaris
ENSCPOG00000005901	PRDM12	95	98.083	ENSCAFG00020024046	PRDM12	93	92.353	Canis_lupus_dingo
ENSCPOG00000005901	PRDM12	95	98.083	ENSCHIG00000025005	PRDM12	94	92.353	Capra_hircus
ENSCPOG00000005901	PRDM12	95	97.444	ENSCCAG00000037485	PRDM12	94	91.765	Cebus_capucinus
ENSCPOG00000005901	PRDM12	95	97.444	ENSCATG00000020327	PRDM12	94	91.765	Cercocebus_atys
ENSCPOG00000005901	PRDM12	95	98.722	ENSCLAG00000005499	PRDM12	86	98.722	Chinchilla_lanigera
ENSCPOG00000005901	PRDM12	95	97.444	ENSCSAG00000014756	PRDM12	93	91.765	Chlorocebus_sabaeus
ENSCPOG00000005901	PRDM12	95	92.971	ENSCPBG00000022628	PRDM12	88	92.971	Chrysemys_picta_bellii
ENSCPOG00000005901	PRDM12	95	98.403	ENSCGRG00001015005	Prdm12	93	92.647	Cricetulus_griseus_chok1gshd
ENSCPOG00000005901	PRDM12	95	81.988	ENSCVAG00000017166	prdm12b	87	81.988	Cyprinodon_variegatus
ENSCPOG00000005901	PRDM12	95	77.015	ENSCVAG00000000944	-	93	73.077	Cyprinodon_variegatus
ENSCPOG00000005901	PRDM12	95	87.066	ENSDARG00000007430	prdm12b	87	87.066	Danio_rerio
ENSCPOG00000005901	PRDM12	95	97.125	ENSDNOG00000042302	PRDM12	94	91.471	Dasypus_novemcinctus
ENSCPOG00000005901	PRDM12	93	61.194	ENSEBUG00000016780	prdm12b	74	62.687	Eptatretus_burgeri
ENSCPOG00000005901	PRDM12	99	93.155	ENSEASG00005008472	PRDM12	93	93.155	Equus_asinus_asinus
ENSCPOG00000005901	PRDM12	99	93.155	ENSECAG00000005933	PRDM12	93	93.155	Equus_caballus
ENSCPOG00000005901	PRDM12	98	81.231	ENSELUG00000013674	PRDM12	89	81.231	Esox_lucius
ENSCPOG00000005901	PRDM12	95	85.625	ENSELUG00000009905	prdm12b	86	85.625	Esox_lucius
ENSCPOG00000005901	PRDM12	95	98.083	ENSFCAG00000043086	PRDM12	94	92.353	Felis_catus
ENSCPOG00000005901	PRDM12	95	92.971	ENSFALG00000001445	PRDM12	79	92.971	Ficedula_albicollis
ENSCPOG00000005901	PRDM12	95	79.268	ENSFHEG00000007746	-	85	79.573	Fundulus_heteroclitus
ENSCPOG00000005901	PRDM12	95	81.538	ENSFHEG00000003944	prdm12b	87	81.846	Fundulus_heteroclitus
ENSCPOG00000005901	PRDM12	95	82.650	ENSGMOG00000011797	prdm12b	88	82.428	Gadus_morhua
ENSCPOG00000005901	PRDM12	95	92.971	ENSGALG00000003895	PRDM12	88	92.971	Gallus_gallus
ENSCPOG00000005901	PRDM12	95	82.812	ENSGAFG00000010827	prdm12b	85	82.812	Gambusia_affinis
ENSCPOG00000005901	PRDM12	95	83.540	ENSGACG00000016713	prdm12b	87	83.540	Gasterosteus_aculeatus
ENSCPOG00000005901	PRDM12	95	93.291	ENSGAGG00000014083	PRDM12	88	93.291	Gopherus_agassizii
ENSCPOG00000005901	PRDM12	95	97.764	ENSGGOG00000010568	PRDM12	93	92.059	Gorilla_gorilla
ENSCPOG00000005901	PRDM12	95	80.909	ENSHBUG00000022537	-	82	77.714	Haplochromis_burtoni
ENSCPOG00000005901	PRDM12	95	80.982	ENSHBUG00000022878	prdm12b	87	80.982	Haplochromis_burtoni
ENSCPOG00000005901	PRDM12	95	98.722	ENSHGLG00000013939	PRDM12	92	93.750	Heterocephalus_glaber_female
ENSCPOG00000005901	PRDM12	95	76.489	ENSHCOG00000021167	-	89	76.489	Hippocampus_comes
ENSCPOG00000005901	PRDM12	95	80.000	ENSHCOG00000003663	prdm12b	84	80.000	Hippocampus_comes
ENSCPOG00000005901	PRDM12	99	77.059	ENSIPUG00000019544	PRDM12	93	77.059	Ictalurus_punctatus
ENSCPOG00000005901	PRDM12	99	83.036	ENSIPUG00000017053	prdm12b	91	83.284	Ictalurus_punctatus
ENSCPOG00000005901	PRDM12	95	98.722	ENSSTOG00000005986	PRDM12	82	98.722	Ictidomys_tridecemlineatus
ENSCPOG00000005901	PRDM12	95	99.042	ENSJJAG00000005424	Prdm12	95	99.042	Jaculus_jaculus
ENSCPOG00000005901	PRDM12	94	80.952	ENSKMAG00000021205	-	89	80.952	Kryptolebias_marmoratus
ENSCPOG00000005901	PRDM12	99	75.350	ENSKMAG00000016921	prdm12b	92	73.387	Kryptolebias_marmoratus
ENSCPOG00000005901	PRDM12	95	82.919	ENSLBEG00000017769	prdm12b	85	82.919	Labrus_bergylta
ENSCPOG00000005901	PRDM12	95	79.692	ENSLBEG00000007776	-	86	80.000	Labrus_bergylta
ENSCPOG00000005901	PRDM12	99	85.672	ENSLACG00000017560	PRDM12	95	85.672	Latimeria_chalumnae
ENSCPOG00000005901	PRDM12	95	87.580	ENSLOCG00000005429	prdm12b	86	87.898	Lepisosteus_oculatus
ENSCPOG00000005901	PRDM12	95	96.238	ENSLAFG00000006979	PRDM12	86	96.238	Loxodonta_africana
ENSCPOG00000005901	PRDM12	95	97.444	ENSMFAG00000040322	PRDM12	93	91.765	Macaca_fascicularis
ENSCPOG00000005901	PRDM12	95	97.444	ENSMNEG00000037234	PRDM12	94	91.765	Macaca_nemestrina
ENSCPOG00000005901	PRDM12	95	82.462	ENSMAMG00000013212	prdm12b	87	82.462	Mastacembelus_armatus
ENSCPOG00000005901	PRDM12	95	79.938	ENSMAMG00000018988	-	83	80.247	Mastacembelus_armatus
ENSCPOG00000005901	PRDM12	95	80.909	ENSMZEG00005000415	PRDM12	88	77.714	Maylandia_zebra
ENSCPOG00000005901	PRDM12	95	92.971	ENSMGAG00000005438	PRDM12	88	92.971	Meleagris_gallopavo
ENSCPOG00000005901	PRDM12	100	92.647	ENSMAUG00000013040	Prdm12	93	92.647	Mesocricetus_auratus
ENSCPOG00000005901	PRDM12	95	98.083	ENSMICG00000015480	PRDM12	86	98.083	Microcebus_murinus
ENSCPOG00000005901	PRDM12	95	98.083	ENSMOCG00000021026	Prdm12	93	92.353	Microtus_ochrogaster
ENSCPOG00000005901	PRDM12	95	95.208	ENSMODG00000012108	PRDM12	88	95.208	Monodelphis_domestica
ENSCPOG00000005901	PRDM12	95	70.093	ENSMALG00000021901	prdm12b	84	70.093	Monopterus_albus
ENSCPOG00000005901	PRDM12	95	98.403	MGP_CAROLIEiJ_G0023414	Prdm12	93	92.647	Mus_caroli
ENSCPOG00000005901	PRDM12	95	98.403	ENSMUSG00000079466	Prdm12	93	92.647	Mus_musculus
ENSCPOG00000005901	PRDM12	95	98.403	MGP_PahariEiJ_G0024871	Prdm12	93	92.647	Mus_pahari
ENSCPOG00000005901	PRDM12	95	98.403	MGP_SPRETEiJ_G0024331	Prdm12	93	92.647	Mus_spretus
ENSCPOG00000005901	PRDM12	95	97.764	ENSNGAG00000018480	Prdm12	89	97.764	Nannospalax_galili
ENSCPOG00000005901	PRDM12	95	80.243	ENSNBRG00000006727	prdm12b	87	80.243	Neolamprologus_brichardi
ENSCPOG00000005901	PRDM12	95	76.471	ENSNBRG00000024312	-	90	76.780	Neolamprologus_brichardi
ENSCPOG00000005901	PRDM12	95	83.706	ENSMEUG00000003828	PRDM12	88	83.706	Notamacropus_eugenii
ENSCPOG00000005901	PRDM12	95	96.805	ENSOPRG00000008680	PRDM12	95	96.805	Ochotona_princeps
ENSCPOG00000005901	PRDM12	95	99.361	ENSODEG00000016282	PRDM12	59	99.361	Octodon_degus
ENSCPOG00000005901	PRDM12	53	96.591	ENSOANG00000001043	PRDM12	81	96.591	Ornithorhynchus_anatinus
ENSCPOG00000005901	PRDM12	88	94.138	ENSOCUG00000008241	PRDM12	93	94.138	Oryctolagus_cuniculus
ENSCPOG00000005901	PRDM12	95	78.419	ENSORLG00000017558	-	84	78.723	Oryzias_latipes
ENSCPOG00000005901	PRDM12	99	78.324	ENSORLG00000007114	prdm12b	94	76.536	Oryzias_latipes
ENSCPOG00000005901	PRDM12	99	78.035	ENSORLG00020019565	prdm12b	94	76.257	Oryzias_latipes_hni
ENSCPOG00000005901	PRDM12	95	78.182	ENSORLG00020013167	-	84	78.485	Oryzias_latipes_hni
ENSCPOG00000005901	PRDM12	95	78.419	ENSORLG00015003435	-	84	78.419	Oryzias_latipes_hsok
ENSCPOG00000005901	PRDM12	99	77.746	ENSORLG00015007621	prdm12b	94	76.323	Oryzias_latipes_hsok
ENSCPOG00000005901	PRDM12	99	77.650	ENSOMEG00000004134	prdm12b	91	77.937	Oryzias_melastigma
ENSCPOG00000005901	PRDM12	95	77.612	ENSOMEG00000007762	-	89	77.612	Oryzias_melastigma
ENSCPOG00000005901	PRDM12	95	98.083	ENSOGAG00000007557	PRDM12	94	98.083	Otolemur_garnettii
ENSCPOG00000005901	PRDM12	87	96.864	ENSPPAG00000031506	-	97	96.864	Pan_paniscus
ENSCPOG00000005901	PRDM12	100	84.164	ENSPPRG00000023024	PRDM12	87	84.164	Panthera_pardus
ENSCPOG00000005901	PRDM12	95	97.444	ENSPTRG00000043324	-	93	91.765	Pan_troglodytes
ENSCPOG00000005901	PRDM12	95	97.444	ENSPTRG00000021475	PRDM12	93	91.765	Pan_troglodytes
ENSCPOG00000005901	PRDM12	95	97.444	ENSPANG00000025967	PRDM12	94	91.765	Papio_anubis
ENSCPOG00000005901	PRDM12	95	79.503	ENSPKIG00000004305	PRDM12	91	79.503	Paramormyrops_kingsleyae
ENSCPOG00000005901	PRDM12	95	85.759	ENSPKIG00000007228	prdm12b	87	85.759	Paramormyrops_kingsleyae
ENSCPOG00000005901	PRDM12	95	92.971	ENSPSIG00000006739	PRDM12	88	92.971	Pelodiscus_sinensis
ENSCPOG00000005901	PRDM12	95	80.818	ENSPMGG00000002356	-	83	80.503	Periophthalmus_magnuspinnatus
ENSCPOG00000005901	PRDM12	95	83.230	ENSPMGG00000008867	prdm12b	86	83.230	Periophthalmus_magnuspinnatus
ENSCPOG00000005901	PRDM12	95	98.403	ENSPEMG00000009969	Prdm12	91	93.994	Peromyscus_maniculatus_bairdii
ENSCPOG00000005901	PRDM12	95	95.527	ENSPCIG00000024119	PRDM12	88	95.527	Phascolarctos_cinereus
ENSCPOG00000005901	PRDM12	95	82.407	ENSPFOG00000019841	prdm12b	88	82.407	Poecilia_formosa
ENSCPOG00000005901	PRDM12	95	83.125	ENSPLAG00000016626	prdm12b	93	77.841	Poecilia_latipinna
ENSCPOG00000005901	PRDM12	92	82.581	ENSPMEG00000016698	prdm12b	93	77.193	Poecilia_mexicana
ENSCPOG00000005901	PRDM12	95	82.972	ENSPREG00000015073	prdm12b	93	77.746	Poecilia_reticulata
ENSCPOG00000005901	PRDM12	91	77.170	ENSPREG00000003211	-	85	77.170	Poecilia_reticulata
ENSCPOG00000005901	PRDM12	95	97.444	ENSPPYG00000019694	PRDM12	89	97.444	Pongo_abelii
ENSCPOG00000005901	PRDM12	95	98.083	ENSPCOG00000022255	PRDM12	93	92.353	Propithecus_coquereli
ENSCPOG00000005901	PRDM12	95	97.764	ENSPVAG00000001511	PRDM12	93	92.059	Pteropus_vampyrus
ENSCPOG00000005901	PRDM12	95	80.909	ENSPNYG00000013589	-	88	77.714	Pundamilia_nyererei
ENSCPOG00000005901	PRDM12	95	80.183	ENSPNYG00000009607	prdm12b	87	80.183	Pundamilia_nyererei
ENSCPOG00000005901	PRDM12	95	88.050	ENSPNAG00000024532	prdm12b	86	88.050	Pygocentrus_nattereri
ENSCPOG00000005901	PRDM12	99	77.711	ENSPNAG00000013396	PRDM12	92	76.163	Pygocentrus_nattereri
ENSCPOG00000005901	PRDM12	95	98.403	ENSRNOG00000009218	Prdm12	93	92.647	Rattus_norvegicus
ENSCPOG00000005901	PRDM12	97	96.250	ENSRBIG00000042712	PRDM12	89	95.666	Rhinopithecus_bieti
ENSCPOG00000005901	PRDM12	95	97.444	ENSRROG00000043554	PRDM12	98	97.444	Rhinopithecus_roxellana
ENSCPOG00000005901	PRDM12	95	94.586	ENSSHAG00000015972	PRDM12	88	94.586	Sarcophilus_harrisii
ENSCPOG00000005901	PRDM12	95	79.403	ENSSMAG00000003754	prdm12b	86	79.701	Scophthalmus_maximus
ENSCPOG00000005901	PRDM12	99	79.240	ENSSDUG00000019071	-	95	79.532	Seriola_dumerili
ENSCPOG00000005901	PRDM12	95	80.240	ENSSDUG00000023498	prdm12b	87	80.240	Seriola_dumerili
ENSCPOG00000005901	PRDM12	95	80.665	ENSSLDG00000009557	prdm12b	87	80.665	Seriola_lalandi_dorsalis
ENSCPOG00000005901	PRDM12	95	83.439	ENSSLDG00000013562	-	90	83.758	Seriola_lalandi_dorsalis
ENSCPOG00000005901	PRDM12	95	92.971	ENSSPUG00000013424	PRDM12	88	92.971	Sphenodon_punctatus
ENSCPOG00000005901	PRDM12	95	70.642	ENSSPAG00000022420	-	83	73.163	Stegastes_partitus
ENSCPOG00000005901	PRDM12	95	80.909	ENSSPAG00000018824	prdm12b	95	76.177	Stegastes_partitus
ENSCPOG00000005901	PRDM12	95	98.083	ENSSSCG00000005703	PRDM12	93	92.353	Sus_scrofa
ENSCPOG00000005901	PRDM12	95	82.812	ENSTRUG00000018659	prdm12b	86	82.812	Takifugu_rubripes
ENSCPOG00000005901	PRDM12	98	77.151	ENSTRUG00000013239	-	94	77.151	Takifugu_rubripes
ENSCPOG00000005901	PRDM12	98	76.786	ENSTNIG00000005859	-	94	76.786	Tetraodon_nigroviridis
ENSCPOG00000005901	PRDM12	95	83.801	ENSTNIG00000009020	prdm12b	86	83.801	Tetraodon_nigroviridis
ENSCPOG00000005901	PRDM12	95	98.083	ENSUAMG00000009653	PRDM12	87	98.083	Ursus_americanus
ENSCPOG00000005901	PRDM12	95	98.083	ENSVVUG00000027662	PRDM12	75	98.083	Vulpes_vulpes
ENSCPOG00000005901	PRDM12	95	82.812	ENSXCOG00000002836	prdm12b	86	82.812	Xiphophorus_couchianus
ENSCPOG00000005901	PRDM12	95	79.630	ENSXMAG00000028012	-	84	79.630	Xiphophorus_maculatus
ENSCPOG00000005901	PRDM12	95	82.298	ENSXMAG00000005537	prdm12b	86	82.298	Xiphophorus_maculatus