EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000005975 (Gene tree)
Gene ID: 100722168
Gene Symbol: APTX
Alias: AOA|AOA1|AXA1|EAOH|EOAHA|FLJ20157
Full Name: aprataxin
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 18298 bases
Position: chrDS562882.1:13841820-13860117
Accession: 100722168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005393	DcpS_C	PF11969.8	5.8e-35	1	1
ENSCPOP00000029271	DcpS_C	PF11969.8	1.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000006038	APTX-202	723	-	ENSCPOP00000005393	240 (aa)	-	H0V6R4
ENSCPOT00000037248	APTX-201	1453	XM_003470826	ENSCPOP00000029271	341 (aa)	XP_003470874	A0A286XVB1

Gene Model

Click here to download ENSCPOG00000005975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000005975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000005975	APTX	100	89.535	ENSG00000137074	APTX	99	89.443	Homo_sapiens
ENSCPOG00000005975	APTX	100	60.435	ENSAPOG00000008785	aptx	100	59.824	Acanthochromis_polyacanthus
ENSCPOG00000005975	APTX	100	90.761	ENSAMEG00000007648	APTX	96	87.977	Ailuropoda_melanoleuca
ENSCPOG00000005975	APTX	100	65.318	ENSACIG00000002035	aptx	100	55.848	Amphilophus_citrinellus
ENSCPOG00000005975	APTX	100	60.117	ENSAOCG00000000634	aptx	100	60.117	Amphiprion_ocellaris
ENSCPOG00000005975	APTX	100	60.117	ENSAPEG00000017253	aptx	100	60.117	Amphiprion_percula
ENSCPOG00000005975	APTX	100	63.492	ENSATEG00000017383	aptx	100	59.238	Anabas_testudineus
ENSCPOG00000005975	APTX	89	65.581	ENSAPLG00000015645	APTX	100	60.248	Anas_platyrhynchos
ENSCPOG00000005975	APTX	100	64.851	ENSACAG00000003581	APTX	95	63.006	Anolis_carolinensis
ENSCPOG00000005975	APTX	100	92.935	ENSANAG00000030160	APTX	99	85.801	Aotus_nancymaae
ENSCPOG00000005975	APTX	99	60.472	ENSACLG00000018887	aptx	100	60.472	Astatotilapia_calliptera
ENSCPOG00000005975	APTX	99	70.492	ENSAMXG00000039899	aptx	99	57.353	Astyanax_mexicanus
ENSCPOG00000005975	APTX	100	92.391	ENSBTAG00000013947	APTX	98	85.924	Bos_taurus
ENSCPOG00000005975	APTX	100	91.848	ENSCJAG00000007940	APTX	99	87.390	Callithrix_jacchus
ENSCPOG00000005975	APTX	100	91.304	ENSCAFG00000001812	APTX	99	87.977	Canis_familiaris
ENSCPOG00000005975	APTX	100	91.304	ENSCAFG00020015598	APTX	99	87.977	Canis_lupus_dingo
ENSCPOG00000005975	APTX	100	92.391	ENSCHIG00000012896	APTX	99	86.217	Capra_hircus
ENSCPOG00000005975	APTX	100	92.391	ENSTSYG00000003041	APTX	99	90.029	Carlito_syrichta
ENSCPOG00000005975	APTX	100	85.000	ENSCAPG00000013470	APTX	100	100.000	Cavia_aperea
ENSCPOG00000005975	APTX	100	91.848	ENSCCAG00000036783	APTX	99	87.390	Cebus_capucinus
ENSCPOG00000005975	APTX	100	92.391	ENSCATG00000042639	APTX	96	88.563	Cercocebus_atys
ENSCPOG00000005975	APTX	100	95.000	ENSCLAG00000012185	APTX	100	95.000	Chinchilla_lanigera
ENSCPOG00000005975	APTX	100	92.935	ENSCSAG00000009885	APTX	96	89.150	Chlorocebus_sabaeus
ENSCPOG00000005975	APTX	100	76.374	ENSCPBG00000023973	APTX	98	64.205	Chrysemys_picta_bellii
ENSCPOG00000005975	APTX	96	48.677	ENSCING00000008741	-	94	39.833	Ciona_intestinalis
ENSCPOG00000005975	APTX	97	52.601	ENSCSAVG00000008038	-	97	42.618	Ciona_savignyi
ENSCPOG00000005975	APTX	100	92.121	ENSCANG00000037253	APTX	99	87.390	Colobus_angolensis_palliatus
ENSCPOG00000005975	APTX	99	92.308	ENSCGRG00001000705	Aptx	99	91.983	Cricetulus_griseus_chok1gshd
ENSCPOG00000005975	APTX	99	92.308	ENSCGRG00000014159	Aptx	99	91.983	Cricetulus_griseus_crigri
ENSCPOG00000005975	APTX	99	63.492	ENSCSEG00000009549	aptx	99	58.580	Cynoglossus_semilaevis
ENSCPOG00000005975	APTX	100	63.054	ENSCVAG00000011942	aptx	99	57.895	Cyprinodon_variegatus
ENSCPOG00000005975	APTX	99	71.111	ENSDARG00000027143	aptx	99	55.621	Danio_rerio
ENSCPOG00000005975	APTX	100	90.710	ENSDNOG00000018498	APTX	96	85.337	Dasypus_novemcinctus
ENSCPOG00000005975	APTX	100	92.391	ENSDORG00000002139	Aptx	100	90.833	Dipodomys_ordii
ENSCPOG00000005975	APTX	73	40.571	FBgn0038704	CG5316	87	47.541	Drosophila_melanogaster
ENSCPOG00000005975	APTX	76	89.560	ENSETEG00000012459	APTX	79	82.143	Echinops_telfairi
ENSCPOG00000005975	APTX	98	58.857	ENSEBUG00000013914	aptx	95	47.851	Eptatretus_burgeri
ENSCPOG00000005975	APTX	99	92.778	ENSEASG00005004566	APTX	99	87.021	Equus_asinus_asinus
ENSCPOG00000005975	APTX	99	93.125	ENSECAG00000012674	APTX	92	87.021	Equus_caballus
ENSCPOG00000005975	APTX	79	94.737	ENSEEUG00000010693	APTX	95	83.162	Erinaceus_europaeus
ENSCPOG00000005975	APTX	100	90.761	ENSFCAG00000008728	APTX	99	88.563	Felis_catus
ENSCPOG00000005975	APTX	100	73.224	ENSFALG00000001230	APTX	100	62.644	Ficedula_albicollis
ENSCPOG00000005975	APTX	100	94.583	ENSFDAG00000013752	APTX	100	94.583	Fukomys_damarensis
ENSCPOG00000005975	APTX	75	69.061	ENSFHEG00000021328	aptx	73	54.167	Fundulus_heteroclitus
ENSCPOG00000005975	APTX	99	60.280	ENSGMOG00000012505	aptx	99	56.765	Gadus_morhua
ENSCPOG00000005975	APTX	100	73.224	ENSGALG00000001954	APTX	100	61.080	Gallus_gallus
ENSCPOG00000005975	APTX	100	68.681	ENSGAFG00000005086	aptx	100	58.772	Gambusia_affinis
ENSCPOG00000005975	APTX	99	63.033	ENSGACG00000017887	aptx	99	57.941	Gasterosteus_aculeatus
ENSCPOG00000005975	APTX	100	76.374	ENSGAGG00000013230	APTX	100	64.205	Gopherus_agassizii
ENSCPOG00000005975	APTX	79	95.522	ENSGGOG00000014232	APTX	95	82.759	Gorilla_gorilla
ENSCPOG00000005975	APTX	99	60.472	ENSHBUG00000021058	aptx	100	60.472	Haplochromis_burtoni
ENSCPOG00000005975	APTX	100	94.167	ENSHGLG00000015093	APTX	100	94.167	Heterocephalus_glaber_female
ENSCPOG00000005975	APTX	100	94.167	ENSHGLG00100013482	APTX	100	94.167	Heterocephalus_glaber_male
ENSCPOG00000005975	APTX	99	70.000	ENSHCOG00000018216	aptx	96	58.702	Hippocampus_comes
ENSCPOG00000005975	APTX	99	73.333	ENSIPUG00000017548	aptx	99	59.412	Ictalurus_punctatus
ENSCPOG00000005975	APTX	100	91.250	ENSSTOG00000005185	APTX	100	91.250	Ictidomys_tridecemlineatus
ENSCPOG00000005975	APTX	97	91.257	ENSJJAG00000015653	Aptx	100	80.352	Jaculus_jaculus
ENSCPOG00000005975	APTX	100	57.771	ENSKMAG00000000117	aptx	100	57.771	Kryptolebias_marmoratus
ENSCPOG00000005975	APTX	99	61.538	ENSLBEG00000015353	aptx	99	58.309	Labrus_bergylta
ENSCPOG00000005975	APTX	99	59.000	ENSLBEG00000021489	APTX	99	51.515	Labrus_bergylta
ENSCPOG00000005975	APTX	99	72.222	ENSLACG00000003376	APTX	99	61.080	Latimeria_chalumnae
ENSCPOG00000005975	APTX	100	65.278	ENSLOCG00000011556	aptx	95	61.290	Lepisosteus_oculatus
ENSCPOG00000005975	APTX	100	88.563	ENSLAFG00000005665	APTX	99	88.563	Loxodonta_africana
ENSCPOG00000005975	APTX	99	93.443	ENSMFAG00000043141	APTX	96	89.118	Macaca_fascicularis
ENSCPOG00000005975	APTX	100	92.935	ENSMMUG00000007724	APTX	96	88.856	Macaca_mulatta
ENSCPOG00000005975	APTX	100	92.391	ENSMNEG00000042341	APTX	99	88.563	Macaca_nemestrina
ENSCPOG00000005975	APTX	100	92.391	ENSMLEG00000035137	APTX	99	88.270	Mandrillus_leucophaeus
ENSCPOG00000005975	APTX	100	66.489	ENSMAMG00000018377	aptx	100	57.771	Mastacembelus_armatus
ENSCPOG00000005975	APTX	99	60.455	ENSMZEG00005022621	aptx	100	60.177	Maylandia_zebra
ENSCPOG00000005975	APTX	75	72.928	ENSMGAG00000005736	APTX	100	72.928	Meleagris_gallopavo
ENSCPOG00000005975	APTX	99	91.758	ENSMAUG00000006039	Aptx	99	91.561	Mesocricetus_auratus
ENSCPOG00000005975	APTX	100	92.391	ENSMICG00000006603	APTX	97	90.029	Microcebus_murinus
ENSCPOG00000005975	APTX	99	90.756	ENSMOCG00000000869	Aptx	99	90.756	Microtus_ochrogaster
ENSCPOG00000005975	APTX	99	73.889	ENSMMOG00000007028	aptx	99	60.704	Mola_mola
ENSCPOG00000005975	APTX	99	65.574	ENSMODG00000003365	APTX	99	60.920	Monodelphis_domestica
ENSCPOG00000005975	APTX	100	53.372	ENSMALG00000003828	aptx	68	85.714	Monopterus_albus
ENSCPOG00000005975	APTX	99	91.176	MGP_CAROLIEiJ_G0025897	-	99	91.176	Mus_caroli
ENSCPOG00000005975	APTX	99	92.017	ENSMUSG00000028411	Aptx	99	92.017	Mus_musculus
ENSCPOG00000005975	APTX	99	90.110	MGP_PahariEiJ_G0024020	Aptx	99	84.661	Mus_pahari
ENSCPOG00000005975	APTX	99	91.758	MGP_SPRETEiJ_G0026846	Aptx	97	84.956	Mus_spretus
ENSCPOG00000005975	APTX	100	89.785	ENSMPUG00000004290	APTX	99	87.097	Mustela_putorius_furo
ENSCPOG00000005975	APTX	100	91.623	ENSMLUG00000016081	APTX	95	88.563	Myotis_lucifugus
ENSCPOG00000005975	APTX	100	88.750	ENSNGAG00000016314	Aptx	100	88.750	Nannospalax_galili
ENSCPOG00000005975	APTX	99	60.177	ENSNBRG00000014199	aptx	100	60.177	Neolamprologus_brichardi
ENSCPOG00000005975	APTX	100	89.736	ENSNLEG00000032184	APTX	99	89.736	Nomascus_leucogenys
ENSCPOG00000005975	APTX	99	74.317	ENSMEUG00000004153	APTX	99	62.500	Notamacropus_eugenii
ENSCPOG00000005975	APTX	85	81.507	ENSOPRG00000012403	APTX	95	81.507	Ochotona_princeps
ENSCPOG00000005975	APTX	100	95.000	ENSODEG00000015832	-	100	95.000	Octodon_degus
ENSCPOG00000005975	APTX	100	78.495	ENSODEG00000000097	-	100	78.495	Octodon_degus
ENSCPOG00000005975	APTX	100	58.651	ENSONIG00000014541	aptx	83	58.651	Oreochromis_niloticus
ENSCPOG00000005975	APTX	79	78.261	ENSOANG00000009878	APTX	98	61.238	Ornithorhynchus_anatinus
ENSCPOG00000005975	APTX	99	93.443	ENSOCUG00000000738	-	99	89.691	Oryctolagus_cuniculus
ENSCPOG00000005975	APTX	99	92.887	ENSOCUG00000025059	-	92	92.887	Oryctolagus_cuniculus
ENSCPOG00000005975	APTX	100	70.225	ENSORLG00000006237	aptx	100	56.140	Oryzias_latipes
ENSCPOG00000005975	APTX	100	70.225	ENSORLG00020021478	aptx	100	56.433	Oryzias_latipes_hni
ENSCPOG00000005975	APTX	100	70.950	ENSORLG00015021873	aptx	95	63.084	Oryzias_latipes_hsok
ENSCPOG00000005975	APTX	74	69.101	ENSOMEG00000007875	aptx	81	55.116	Oryzias_melastigma
ENSCPOG00000005975	APTX	100	90.761	ENSOGAG00000005388	APTX	96	88.270	Otolemur_garnettii
ENSCPOG00000005975	APTX	100	92.391	ENSOARG00000009598	APTX	96	86.510	Ovis_aries
ENSCPOG00000005975	APTX	100	89.535	ENSPPAG00000030295	APTX	96	89.443	Pan_paniscus
ENSCPOG00000005975	APTX	100	90.761	ENSPPRG00000017524	APTX	99	88.856	Panthera_pardus
ENSCPOG00000005975	APTX	100	90.761	ENSPTIG00000020000	APTX	99	88.856	Panthera_tigris_altaica
ENSCPOG00000005975	APTX	100	89.535	ENSPTRG00000020850	APTX	99	89.443	Pan_troglodytes
ENSCPOG00000005975	APTX	100	92.391	ENSPANG00000025301	APTX	96	88.563	Papio_anubis
ENSCPOG00000005975	APTX	99	71.271	ENSPKIG00000013601	aptx	99	59.375	Paramormyrops_kingsleyae
ENSCPOG00000005975	APTX	100	76.087	ENSPSIG00000010521	APTX	94	76.087	Pelodiscus_sinensis
ENSCPOG00000005975	APTX	98	66.667	ENSPMGG00000018649	aptx	99	56.395	Periophthalmus_magnuspinnatus
ENSCPOG00000005975	APTX	99	90.756	ENSPEMG00000007747	Aptx	99	90.756	Peromyscus_maniculatus_bairdii
ENSCPOG00000005975	APTX	99	55.618	ENSPMAG00000008417	aptx	97	46.667	Petromyzon_marinus
ENSCPOG00000005975	APTX	100	74.863	ENSPCIG00000029852	APTX	100	66.667	Phascolarctos_cinereus
ENSCPOG00000005975	APTX	100	60.538	ENSPFOG00000005131	-	99	59.357	Poecilia_formosa
ENSCPOG00000005975	APTX	100	60.090	ENSPFOG00000004992	aptx	100	59.064	Poecilia_formosa
ENSCPOG00000005975	APTX	100	60.538	ENSPLAG00000007960	APTX	100	59.357	Poecilia_latipinna
ENSCPOG00000005975	APTX	100	60.538	ENSPLAG00000007906	aptx	100	59.357	Poecilia_latipinna
ENSCPOG00000005975	APTX	100	60.090	ENSPMEG00000019789	APTX	100	59.064	Poecilia_mexicana
ENSCPOG00000005975	APTX	100	60.538	ENSPMEG00000018504	aptx	100	59.357	Poecilia_mexicana
ENSCPOG00000005975	APTX	100	54.094	ENSPREG00000004375	aptx	100	54.094	Poecilia_reticulata
ENSCPOG00000005975	APTX	100	90.323	ENSPPYG00000019142	APTX	96	90.323	Pongo_abelii
ENSCPOG00000005975	APTX	100	73.021	ENSPCAG00000010014	APTX	99	73.021	Procavia_capensis
ENSCPOG00000005975	APTX	100	93.478	ENSPCOG00000016780	APTX	99	90.909	Propithecus_coquereli
ENSCPOG00000005975	APTX	100	88.482	ENSPVAG00000011468	APTX	96	85.337	Pteropus_vampyrus
ENSCPOG00000005975	APTX	99	60.472	ENSPNYG00000007675	aptx	100	60.472	Pundamilia_nyererei
ENSCPOG00000005975	APTX	99	61.722	ENSPNAG00000015984	aptx	99	56.471	Pygocentrus_nattereri
ENSCPOG00000005975	APTX	99	91.758	ENSRNOG00000006582	Aptx	99	79.941	Rattus_norvegicus
ENSCPOG00000005975	APTX	100	92.121	ENSRBIG00000042913	APTX	99	87.977	Rhinopithecus_bieti
ENSCPOG00000005975	APTX	100	92.121	ENSRROG00000035395	APTX	99	87.683	Rhinopithecus_roxellana
ENSCPOG00000005975	APTX	100	92.391	ENSSBOG00000025215	APTX	99	87.390	Saimiri_boliviensis_boliviensis
ENSCPOG00000005975	APTX	99	73.224	ENSSHAG00000012205	APTX	94	66.864	Sarcophilus_harrisii
ENSCPOG00000005975	APTX	99	74.860	ENSSFOG00015009267	aptx	99	62.429	Scleropages_formosus
ENSCPOG00000005975	APTX	100	60.117	ENSSMAG00000008839	aptx	100	60.117	Scophthalmus_maximus
ENSCPOG00000005975	APTX	100	63.594	ENSSDUG00000001989	aptx	100	59.824	Seriola_dumerili
ENSCPOG00000005975	APTX	100	60.731	ENSSLDG00000004915	aptx	100	59.531	Seriola_lalandi_dorsalis
ENSCPOG00000005975	APTX	100	75.410	ENSSPUG00000008994	APTX	86	63.533	Sphenodon_punctatus
ENSCPOG00000005975	APTX	100	60.699	ENSSPAG00000020373	aptx	100	60.117	Stegastes_partitus
ENSCPOG00000005975	APTX	99	92.391	ENSSSCG00000011001	APTX	99	89.118	Sus_scrofa
ENSCPOG00000005975	APTX	100	71.196	ENSTGUG00000001441	APTX	99	61.159	Taeniopygia_guttata
ENSCPOG00000005975	APTX	99	67.978	ENSTRUG00000009794	aptx	99	57.227	Takifugu_rubripes
ENSCPOG00000005975	APTX	99	69.663	ENSTNIG00000010570	aptx	98	58.284	Tetraodon_nigroviridis
ENSCPOG00000005975	APTX	100	93.168	ENSTBEG00000008504	APTX	96	82.405	Tupaia_belangeri
ENSCPOG00000005975	APTX	93	81.646	ENSTTRG00000007384	APTX	95	81.646	Tursiops_truncatus
ENSCPOG00000005975	APTX	99	91.875	ENSUAMG00000003700	APTX	97	87.906	Ursus_americanus
ENSCPOG00000005975	APTX	99	91.209	ENSUMAG00000005837	APTX	99	87.906	Ursus_maritimus
ENSCPOG00000005975	APTX	94	86.047	ENSVPAG00000001297	APTX	99	60.472	Vicugna_pacos
ENSCPOG00000005975	APTX	100	91.304	ENSVVUG00000021130	APTX	99	87.977	Vulpes_vulpes
ENSCPOG00000005975	APTX	99	67.895	ENSXETG00000024143	aptx	99	60.571	Xenopus_tropicalis
ENSCPOG00000005975	APTX	100	69.613	ENSXCOG00000005020	aptx	100	55.899	Xiphophorus_couchianus
ENSCPOG00000005975	APTX	100	59.064	ENSXMAG00000022086	aptx	97	59.064	Xiphophorus_maculatus