EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000006253 (Gene tree)
Gene ID: 100727521
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 30997 bases
Position: chrDS562866.1:48971213-49002209
Accession: 100727521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005639	RRM_1	PF00076.22	1.4e-55	1	3
ENSCPOP00000005639	RRM_1	PF00076.22	1.4e-55	2	3
ENSCPOP00000005639	RRM_1	PF00076.22	1.4e-55	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000006318	RBM28-201	2395	XM_003475167	ENSCPOP00000005639	758 (aa)	XP_003475215	H0V7D3

Gene Model

Click here to download ENSCPOG00000006253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000006253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000006253	RBM28	100	83.574	ENSG00000106344	RBM28	100	95.000	Homo_sapiens
ENSCPOG00000006253	RBM28	57	54.464	ENSAPOG00000015512	rbm28	61	54.357	Acanthochromis_polyacanthus
ENSCPOG00000006253	RBM28	100	90.217	ENSAMEG00000004776	RBM28	92	90.217	Ailuropoda_melanoleuca
ENSCPOG00000006253	RBM28	55	55.687	ENSACIG00000023153	rbm28	100	51.931	Amphilophus_citrinellus
ENSCPOG00000006253	RBM28	57	54.018	ENSAOCG00000000462	rbm28	100	50.830	Amphiprion_ocellaris
ENSCPOG00000006253	RBM28	57	53.795	ENSAPEG00000012996	rbm28	64	53.360	Amphiprion_percula
ENSCPOG00000006253	RBM28	58	51.688	ENSATEG00000001672	rbm28	64	51.008	Anabas_testudineus
ENSCPOG00000006253	RBM28	100	83.641	ENSANAG00000033922	RBM28	100	82.850	Aotus_nancymaae
ENSCPOG00000006253	RBM28	100	50.000	ENSACLG00000025024	rbm28	63	54.601	Astatotilapia_calliptera
ENSCPOG00000006253	RBM28	57	57.339	ENSAMXG00000000763	rbm28	99	59.417	Astyanax_mexicanus
ENSCPOG00000006253	RBM28	100	81.266	ENSBTAG00000017001	RBM28	100	95.000	Bos_taurus
ENSCPOG00000006253	RBM28	100	82.940	ENSCJAG00000017731	RBM28	100	82.152	Callithrix_jacchus
ENSCPOG00000006253	RBM28	100	82.718	ENSCAFG00000001667	RBM28	100	82.850	Canis_familiaris
ENSCPOG00000006253	RBM28	100	82.718	ENSCAFG00020021648	RBM28	100	82.850	Canis_lupus_dingo
ENSCPOG00000006253	RBM28	100	80.475	ENSCHIG00000014146	RBM28	100	80.475	Capra_hircus
ENSCPOG00000006253	RBM28	100	81.414	ENSTSYG00000002892	RBM28	100	90.000	Carlito_syrichta
ENSCPOG00000006253	RBM28	84	76.063	ENSCAPG00000013218	RBM28	100	74.173	Cavia_aperea
ENSCPOG00000006253	RBM28	100	82.740	ENSCCAG00000035105	RBM28	100	82.872	Cebus_capucinus
ENSCPOG00000006253	RBM28	100	82.677	ENSCATG00000040497	RBM28	100	92.500	Cercocebus_atys
ENSCPOG00000006253	RBM28	100	85.488	ENSCLAG00000003707	RBM28	100	86.280	Chinchilla_lanigera
ENSCPOG00000006253	RBM28	100	83.663	ENSCSAG00000010161	RBM28	100	83.004	Chlorocebus_sabaeus
ENSCPOG00000006253	RBM28	56	85.484	ENSCHOG00000001994	-	63	85.484	Choloepus_hoffmanni
ENSCPOG00000006253	RBM28	51	59.911	ENSCPBG00000018088	RBM28	83	60.626	Chrysemys_picta_bellii
ENSCPOG00000006253	RBM28	91	82.129	ENSCANG00000038397	RBM28	100	95.000	Colobus_angolensis_palliatus
ENSCPOG00000006253	RBM28	66	82.696	ENSCGRG00001021278	Rbm28	100	78.645	Cricetulus_griseus_chok1gshd
ENSCPOG00000006253	RBM28	100	80.079	ENSCGRG00000005098	Rbm28	100	80.079	Cricetulus_griseus_crigri
ENSCPOG00000006253	RBM28	100	50.569	ENSCSEG00000004212	rbm28	65	53.239	Cynoglossus_semilaevis
ENSCPOG00000006253	RBM28	58	54.803	ENSCVAG00000010493	rbm28	99	49.814	Cyprinodon_variegatus
ENSCPOG00000006253	RBM28	86	54.957	ENSDARG00000025332	rbm28	79	53.846	Danio_rerio
ENSCPOG00000006253	RBM28	100	81.266	ENSDNOG00000001124	RBM28	100	81.266	Dasypus_novemcinctus
ENSCPOG00000006253	RBM28	65	82.258	ENSDORG00000004184	Rbm28	97	82.460	Dipodomys_ordii
ENSCPOG00000006253	RBM28	71	38.007	FBgn0260456	CG4806	68	38.856	Drosophila_melanogaster
ENSCPOG00000006253	RBM28	100	69.908	ENSETEG00000007130	RBM28	99	69.908	Echinops_telfairi
ENSCPOG00000006253	RBM28	99	40.420	ENSEBUG00000004419	rbm28	98	40.448	Eptatretus_burgeri
ENSCPOG00000006253	RBM28	100	82.920	ENSEASG00005008528	RBM28	100	82.920	Equus_asinus_asinus
ENSCPOG00000006253	RBM28	100	82.031	ENSECAG00000007745	RBM28	100	82.161	Equus_caballus
ENSCPOG00000006253	RBM28	100	74.312	ENSEEUG00000002389	RBM28	100	74.443	Erinaceus_europaeus
ENSCPOG00000006253	RBM28	100	51.777	ENSELUG00000020602	rbm28	100	52.405	Esox_lucius
ENSCPOG00000006253	RBM28	100	81.794	ENSFCAG00000000946	RBM28	100	95.000	Felis_catus
ENSCPOG00000006253	RBM28	100	89.460	ENSFDAG00000010169	RBM28	100	89.592	Fukomys_damarensis
ENSCPOG00000006253	RBM28	58	52.392	ENSGMOG00000007091	rbm28	66	50.422	Gadus_morhua
ENSCPOG00000006253	RBM28	58	56.027	ENSGAFG00000004802	rbm28	97	56.250	Gambusia_affinis
ENSCPOG00000006253	RBM28	57	55.862	ENSGACG00000012612	rbm28	80	53.416	Gasterosteus_aculeatus
ENSCPOG00000006253	RBM28	71	80.220	ENSGAGG00000008873	RBM28	86	80.220	Gopherus_agassizii
ENSCPOG00000006253	RBM28	95	82.940	ENSGGOG00000004644	RBM28	97	82.524	Gorilla_gorilla
ENSCPOG00000006253	RBM28	91	50.349	ENSHBUG00000009611	rbm28	60	54.977	Haplochromis_burtoni
ENSCPOG00000006253	RBM28	100	89.050	ENSHGLG00000005409	RBM28	100	89.065	Heterocephalus_glaber_female
ENSCPOG00000006253	RBM28	100	89.050	ENSHGLG00100016458	RBM28	100	88.259	Heterocephalus_glaber_male
ENSCPOG00000006253	RBM28	82	50.265	ENSHCOG00000010597	rbm28	89	48.947	Hippocampus_comes
ENSCPOG00000006253	RBM28	56	51.185	ENSIPUG00000007103	rbm28	92	48.936	Ictalurus_punctatus
ENSCPOG00000006253	RBM28	100	83.029	ENSSTOG00000002169	RBM28	100	83.812	Ictidomys_tridecemlineatus
ENSCPOG00000006253	RBM28	100	74.935	ENSJJAG00000022400	Rbm28	100	75.821	Jaculus_jaculus
ENSCPOG00000006253	RBM28	57	55.234	ENSKMAG00000013348	rbm28	99	49.559	Kryptolebias_marmoratus
ENSCPOG00000006253	RBM28	58	54.911	ENSLBEG00000012998	rbm28	100	49.553	Labrus_bergylta
ENSCPOG00000006253	RBM28	74	56.870	ENSLACG00000010485	-	99	57.192	Latimeria_chalumnae
ENSCPOG00000006253	RBM28	100	61.856	ENSLOCG00000015541	rbm28	81	61.856	Lepisosteus_oculatus
ENSCPOG00000006253	RBM28	100	80.739	ENSLAFG00000010717	RBM28	100	80.475	Loxodonta_africana
ENSCPOG00000006253	RBM28	100	82.940	ENSMFAG00000031036	RBM28	100	92.500	Macaca_fascicularis
ENSCPOG00000006253	RBM28	100	83.093	ENSMMUG00000007250	RBM28	100	92.500	Macaca_mulatta
ENSCPOG00000006253	RBM28	100	82.718	ENSMNEG00000036970	RBM28	100	92.500	Macaca_nemestrina
ENSCPOG00000006253	RBM28	84	80.851	ENSMLEG00000037717	RBM28	100	81.489	Mandrillus_leucophaeus
ENSCPOG00000006253	RBM28	100	50.888	ENSMAMG00000008525	rbm28	100	51.166	Mastacembelus_armatus
ENSCPOG00000006253	RBM28	93	49.059	ENSMZEG00005019625	rbm28	68	54.601	Maylandia_zebra
ENSCPOG00000006253	RBM28	100	77.892	ENSMAUG00000002263	Rbm28	100	77.635	Mesocricetus_auratus
ENSCPOG00000006253	RBM28	93	80.332	ENSMICG00000000107	RBM28	100	80.609	Microcebus_murinus
ENSCPOG00000006253	RBM28	100	80.921	ENSMOCG00000014615	Rbm28	100	80.658	Microtus_ochrogaster
ENSCPOG00000006253	RBM28	58	54.442	ENSMMOG00000008600	rbm28	97	52.878	Mola_mola
ENSCPOG00000006253	RBM28	100	71.242	ENSMODG00000015151	RBM28	100	71.503	Monodelphis_domestica
ENSCPOG00000006253	RBM28	58	53.362	ENSMALG00000006419	rbm28	61	51.738	Monopterus_albus
ENSCPOG00000006253	RBM28	100	81.950	MGP_CAROLIEiJ_G0028162	Rbm28	100	81.950	Mus_caroli
ENSCPOG00000006253	RBM28	100	81.291	ENSMUSG00000029701	Rbm28	100	81.291	Mus_musculus
ENSCPOG00000006253	RBM28	100	82.082	MGP_PahariEiJ_G0021920	Rbm28	100	82.213	Mus_pahari
ENSCPOG00000006253	RBM28	100	81.423	MGP_SPRETEiJ_G0029162	Rbm28	100	81.423	Mus_spretus
ENSCPOG00000006253	RBM28	100	81.711	ENSMPUG00000006511	RBM28	100	81.711	Mustela_putorius_furo
ENSCPOG00000006253	RBM28	100	80.446	ENSMLUG00000002186	RBM28	100	82.021	Myotis_lucifugus
ENSCPOG00000006253	RBM28	100	77.836	ENSNGAG00000017946	-	100	77.704	Nannospalax_galili
ENSCPOG00000006253	RBM28	100	80.607	ENSNGAG00000006480	-	100	80.739	Nannospalax_galili
ENSCPOG00000006253	RBM28	100	83.007	ENSNLEG00000012307	RBM28	100	95.000	Nomascus_leucogenys
ENSCPOG00000006253	RBM28	80	81.250	ENSMEUG00000009611	RBM28	87	81.250	Notamacropus_eugenii
ENSCPOG00000006253	RBM28	90	74.095	ENSOPRG00000015140	RBM28	90	75.143	Ochotona_princeps
ENSCPOG00000006253	RBM28	94	72.549	ENSODEG00000013217	-	87	89.100	Octodon_degus
ENSCPOG00000006253	RBM28	100	84.697	ENSODEG00000003213	-	100	84.960	Octodon_degus
ENSCPOG00000006253	RBM28	58	54.444	ENSONIG00000014924	rbm28	100	50.064	Oreochromis_niloticus
ENSCPOG00000006253	RBM28	100	62.159	ENSOANG00000000815	-	100	62.159	Ornithorhynchus_anatinus
ENSCPOG00000006253	RBM28	100	80.183	ENSOCUG00000003009	RBM28	100	80.443	Oryctolagus_cuniculus
ENSCPOG00000006253	RBM28	58	55.856	ENSORLG00000009636	rbm28	99	51.355	Oryzias_latipes
ENSCPOG00000006253	RBM28	58	56.306	ENSORLG00020002123	rbm28	99	51.943	Oryzias_latipes_hni
ENSCPOG00000006253	RBM28	87	60.294	ENSORLG00015015030	rbm28	97	60.294	Oryzias_latipes_hsok
ENSCPOG00000006253	RBM28	58	55.965	ENSOMEG00000007801	rbm28	64	54.949	Oryzias_melastigma
ENSCPOG00000006253	RBM28	90	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
ENSCPOG00000006253	RBM28	100	80.026	ENSOARG00000002547	RBM28	100	80.158	Ovis_aries
ENSCPOG00000006253	RBM28	100	83.093	ENSPPAG00000041730	RBM28	100	95.000	Pan_paniscus
ENSCPOG00000006253	RBM28	100	81.555	ENSPPRG00000004420	RBM28	100	95.000	Panthera_pardus
ENSCPOG00000006253	RBM28	100	81.662	ENSPTIG00000008550	RBM28	100	95.000	Panthera_tigris_altaica
ENSCPOG00000006253	RBM28	100	83.355	ENSPTRG00000019659	RBM28	100	95.000	Pan_troglodytes
ENSCPOG00000006253	RBM28	100	83.093	ENSPANG00000022295	RBM28	100	92.500	Papio_anubis
ENSCPOG00000006253	RBM28	99	50.185	ENSPKIG00000023453	rbm28	65	52.559	Paramormyrops_kingsleyae
ENSCPOG00000006253	RBM28	83	57.282	ENSPMGG00000012840	rbm28	99	57.282	Periophthalmus_magnuspinnatus
ENSCPOG00000006253	RBM28	100	79.578	ENSPEMG00000020673	Rbm28	100	79.051	Peromyscus_maniculatus_bairdii
ENSCPOG00000006253	RBM28	100	69.713	ENSPCIG00000012810	RBM28	100	69.673	Phascolarctos_cinereus
ENSCPOG00000006253	RBM28	58	55.982	ENSPFOG00000018209	rbm28	62	54.202	Poecilia_formosa
ENSCPOG00000006253	RBM28	57	55.909	ENSPLAG00000016078	rbm28	96	49.612	Poecilia_latipinna
ENSCPOG00000006253	RBM28	58	56.854	ENSPMEG00000004292	rbm28	62	55.021	Poecilia_mexicana
ENSCPOG00000006253	RBM28	56	55.102	ENSPREG00000014287	rbm28	77	53.165	Poecilia_reticulata
ENSCPOG00000006253	RBM28	100	83.794	ENSPPYG00000017975	RBM28	100	83.399	Pongo_abelii
ENSCPOG00000006253	RBM28	74	74.085	ENSPCAG00000008223	RBM28	83	73.961	Procavia_capensis
ENSCPOG00000006253	RBM28	100	82.292	ENSPCOG00000016797	RBM28	100	95.000	Propithecus_coquereli
ENSCPOG00000006253	RBM28	77	92.093	ENSPVAG00000005443	RBM28	76	92.093	Pteropus_vampyrus
ENSCPOG00000006253	RBM28	100	49.749	ENSPNYG00000014003	rbm28	63	54.527	Pundamilia_nyererei
ENSCPOG00000006253	RBM28	100	79.183	ENSRNOG00000005468	Rbm28	100	79.447	Rattus_norvegicus
ENSCPOG00000006253	RBM28	100	82.330	ENSRBIG00000033990	RBM28	100	95.000	Rhinopithecus_bieti
ENSCPOG00000006253	RBM28	100	82.831	ENSRROG00000040747	RBM28	100	95.000	Rhinopithecus_roxellana
ENSCPOG00000006253	RBM28	85	77.487	ENSSBOG00000012308	RBM28	100	77.487	Saimiri_boliviensis_boliviensis
ENSCPOG00000006253	RBM28	96	67.935	ENSSHAG00000017017	RBM28	99	67.439	Sarcophilus_harrisii
ENSCPOG00000006253	RBM28	58	53.288	ENSSMAG00000003885	rbm28	97	52.119	Scophthalmus_maximus
ENSCPOG00000006253	RBM28	58	55.531	ENSSDUG00000014270	rbm28	95	53.988	Seriola_dumerili
ENSCPOG00000006253	RBM28	58	55.973	ENSSLDG00000020099	rbm28	100	50.192	Seriola_lalandi_dorsalis
ENSCPOG00000006253	RBM28	76	84.673	ENSSARG00000008303	RBM28	81	84.673	Sorex_araneus
ENSCPOG00000006253	RBM28	66	75.000	ENSSPUG00000000838	RBM28	79	75.000	Sphenodon_punctatus
ENSCPOG00000006253	RBM28	57	51.991	ENSSPAG00000023305	rbm28	100	50.000	Stegastes_partitus
ENSCPOG00000006253	RBM28	100	81.496	ENSSSCG00000031847	RBM28	100	80.418	Sus_scrofa
ENSCPOG00000006253	RBM28	58	54.923	ENSTRUG00000013311	rbm28	99	49.937	Takifugu_rubripes
ENSCPOG00000006253	RBM28	99	51.535	ENSTNIG00000017962	rbm28	64	54.021	Tetraodon_nigroviridis
ENSCPOG00000006253	RBM28	86	86.686	ENSTBEG00000012749	RBM28	86	86.686	Tupaia_belangeri
ENSCPOG00000006253	RBM28	100	78.581	ENSTTRG00000013647	RBM28	100	78.581	Tursiops_truncatus
ENSCPOG00000006253	RBM28	100	75.690	ENSUAMG00000006949	RBM28	100	75.821	Ursus_americanus
ENSCPOG00000006253	RBM28	100	82.454	ENSUMAG00000005997	RBM28	100	82.454	Ursus_maritimus
ENSCPOG00000006253	RBM28	88	73.193	ENSVPAG00000008304	RBM28	87	72.741	Vicugna_pacos
ENSCPOG00000006253	RBM28	100	82.454	ENSVVUG00000007270	RBM28	100	82.586	Vulpes_vulpes
ENSCPOG00000006253	RBM28	99	55.969	ENSXETG00000009271	rbm28	99	56.057	Xenopus_tropicalis
ENSCPOG00000006253	RBM28	58	53.968	ENSXCOG00000020357	rbm28	99	52.830	Xiphophorus_couchianus
ENSCPOG00000006253	RBM28	57	55.556	ENSXMAG00000004415	rbm28	100	49.935	Xiphophorus_maculatus