EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000006390 (Gene tree)
Gene ID: 100724093
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 13368 bases
Position: chrDS562893.1:18943817-18957184
Accession: 100724093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005759	Exo_endo_phos	PF03372.23	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000006455	TDP2-201	2946	XM_003468768	ENSCPOP00000005759	358 (aa)	XP_003468816	H0V7P0

Gene Model

Click here to download ENSCPOG00000006390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000006390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000006390	TDP2	95	86.804	ENSG00000111802	TDP2	100	85.635	Homo_sapiens
ENSCPOG00000006390	TDP2	70	53.937	ENSAPOG00000018379	-	89	53.937	Acanthochromis_polyacanthus
ENSCPOG00000006390	TDP2	78	88.849	ENSAMEG00000010230	TDP2	99	88.849	Ailuropoda_melanoleuca
ENSCPOG00000006390	TDP2	71	52.734	ENSAPEG00000004208	-	91	52.734	Amphiprion_percula
ENSCPOG00000006390	TDP2	76	48.175	ENSATEG00000010663	-	89	48.175	Anabas_testudineus
ENSCPOG00000006390	TDP2	94	65.373	ENSACAG00000002332	TDP2	92	65.089	Anolis_carolinensis
ENSCPOG00000006390	TDP2	96	86.297	ENSANAG00000020033	TDP2	94	86.765	Aotus_nancymaae
ENSCPOG00000006390	TDP2	79	47.719	ENSACLG00000016174	tdp2b	96	47.719	Astatotilapia_calliptera
ENSCPOG00000006390	TDP2	75	54.074	ENSACLG00000016148	tdp2b	95	54.074	Astatotilapia_calliptera
ENSCPOG00000006390	TDP2	79	48.070	ENSACLG00000016132	tdp2b	96	48.070	Astatotilapia_calliptera
ENSCPOG00000006390	TDP2	97	51.323	ENSAMXG00000011775	tdp2b	95	52.762	Astyanax_mexicanus
ENSCPOG00000006390	TDP2	76	49.635	ENSAMXG00000036549	tdp2a	89	49.635	Astyanax_mexicanus
ENSCPOG00000006390	TDP2	100	81.593	ENSBTAG00000000365	TDP2	94	84.503	Bos_taurus
ENSCPOG00000006390	TDP2	91	31.003	WBGene00013405	tdpt-1	85	31.003	Caenorhabditis_elegans
ENSCPOG00000006390	TDP2	100	84.254	ENSCJAG00000021963	-	100	84.254	Callithrix_jacchus
ENSCPOG00000006390	TDP2	100	85.083	ENSCJAG00000006074	TDP2	100	85.083	Callithrix_jacchus
ENSCPOG00000006390	TDP2	99	82.535	ENSCAFG00000010428	TDP2	96	91.367	Canis_familiaris
ENSCPOG00000006390	TDP2	78	91.367	ENSCAFG00020009994	TDP2	96	91.367	Canis_lupus_dingo
ENSCPOG00000006390	TDP2	78	87.857	ENSCHIG00000015294	-	95	87.857	Capra_hircus
ENSCPOG00000006390	TDP2	86	87.379	ENSTSYG00000037199	TDP2	100	87.379	Carlito_syrichta
ENSCPOG00000006390	TDP2	100	85.912	ENSCCAG00000022734	TDP2	100	85.912	Cebus_capucinus
ENSCPOG00000006390	TDP2	100	86.313	ENSCATG00000022076	TDP2	91	91.367	Cercocebus_atys
ENSCPOG00000006390	TDP2	100	93.855	ENSCLAG00000002072	TDP2	100	93.855	Chinchilla_lanigera
ENSCPOG00000006390	TDP2	100	86.034	ENSCSAG00000007769	TDP2	100	86.034	Chlorocebus_sabaeus
ENSCPOG00000006390	TDP2	96	69.388	ENSCPBG00000006551	TDP2	86	69.412	Chrysemys_picta_bellii
ENSCPOG00000006390	TDP2	100	86.313	ENSCANG00000040122	TDP2	100	86.313	Colobus_angolensis_palliatus
ENSCPOG00000006390	TDP2	95	68.622	ENSCGRG00001000384	Tdp2	91	68.824	Cricetulus_griseus_chok1gshd
ENSCPOG00000006390	TDP2	95	67.251	ENSCGRG00000010250	Tdp2	93	68.421	Cricetulus_griseus_crigri
ENSCPOG00000006390	TDP2	94	53.143	ENSCVAG00000003114	tdp2b	95	52.571	Cyprinodon_variegatus
ENSCPOG00000006390	TDP2	99	51.697	ENSDARG00000035954	tdp2b	95	52.877	Danio_rerio
ENSCPOG00000006390	TDP2	68	50.204	ENSDARG00000069941	tdp2a	55	50.204	Danio_rerio
ENSCPOG00000006390	TDP2	99	83.898	ENSDNOG00000044082	TDP2	93	85.588	Dasypus_novemcinctus
ENSCPOG00000006390	TDP2	78	86.691	ENSETEG00000019096	TDP2	100	86.691	Echinops_telfairi
ENSCPOG00000006390	TDP2	76	52.015	ENSEBUG00000006535	tdp2a	63	52.015	Eptatretus_burgeri
ENSCPOG00000006390	TDP2	95	86.217	ENSEASG00005007656	TDP2	94	86.471	Equus_asinus_asinus
ENSCPOG00000006390	TDP2	95	86.217	ENSECAG00000014264	TDP2	94	86.471	Equus_caballus
ENSCPOG00000006390	TDP2	95	81.232	ENSEEUG00000010776	TDP2	94	81.471	Erinaceus_europaeus
ENSCPOG00000006390	TDP2	82	43.709	ENSELUG00000009321	tdp2a	86	45.848	Esox_lucius
ENSCPOG00000006390	TDP2	93	53.867	ENSELUG00000016449	tdp2b	95	53.867	Esox_lucius
ENSCPOG00000006390	TDP2	98	86.610	ENSFCAG00000025612	TDP2	94	87.059	Felis_catus
ENSCPOG00000006390	TDP2	97	61.095	ENSFALG00000004710	TDP2	94	61.584	Ficedula_albicollis
ENSCPOG00000006390	TDP2	78	92.806	ENSFDAG00000006512	TDP2	96	92.806	Fukomys_damarensis
ENSCPOG00000006390	TDP2	73	51.136	ENSFHEG00000013560	-	90	51.136	Fundulus_heteroclitus
ENSCPOG00000006390	TDP2	95	67.544	ENSGALG00000013637	TDP2	92	67.449	Gallus_gallus
ENSCPOG00000006390	TDP2	98	70.455	ENSGAGG00000002853	TDP2	87	71.176	Gopherus_agassizii
ENSCPOG00000006390	TDP2	95	86.510	ENSGGOG00000014237	TDP2	100	85.359	Gorilla_gorilla
ENSCPOG00000006390	TDP2	58	57.212	ENSHBUG00000005421	-	86	57.212	Haplochromis_burtoni
ENSCPOG00000006390	TDP2	94	53.073	ENSHBUG00000002714	tdp2b	95	52.528	Haplochromis_burtoni
ENSCPOG00000006390	TDP2	100	89.972	ENSHGLG00000008655	TDP2	100	88.858	Heterocephalus_glaber_female
ENSCPOG00000006390	TDP2	100	90.251	ENSHGLG00100019087	TDP2	100	89.136	Heterocephalus_glaber_male
ENSCPOG00000006390	TDP2	93	53.631	ENSIPUG00000013691	tdp2b	94	53.631	Ictalurus_punctatus
ENSCPOG00000006390	TDP2	100	66.480	ENSJJAG00000021685	Tdp2	97	68.935	Jaculus_jaculus
ENSCPOG00000006390	TDP2	73	51.331	ENSKMAG00000015485	-	84	51.331	Kryptolebias_marmoratus
ENSCPOG00000006390	TDP2	95	59.375	ENSLACG00000008852	TDP2	95	59.375	Latimeria_chalumnae
ENSCPOG00000006390	TDP2	77	59.928	ENSLOCG00000005817	tdp2b	99	59.928	Lepisosteus_oculatus
ENSCPOG00000006390	TDP2	95	85.924	ENSLAFG00000002567	TDP2	97	86.176	Loxodonta_africana
ENSCPOG00000006390	TDP2	100	86.592	ENSMFAG00000045296	TDP2	100	86.592	Macaca_fascicularis
ENSCPOG00000006390	TDP2	100	86.592	ENSMMUG00000009803	TDP2	100	86.592	Macaca_mulatta
ENSCPOG00000006390	TDP2	100	86.592	ENSMNEG00000038003	TDP2	100	86.592	Macaca_nemestrina
ENSCPOG00000006390	TDP2	100	86.034	ENSMLEG00000028883	TDP2	100	86.034	Mandrillus_leucophaeus
ENSCPOG00000006390	TDP2	93	54.070	ENSMAMG00000013654	tdp2b	94	54.070	Mastacembelus_armatus
ENSCPOG00000006390	TDP2	72	49.035	ENSMZEG00005004103	tdp2b	86	49.035	Maylandia_zebra
ENSCPOG00000006390	TDP2	79	49.301	ENSMZEG00005004126	tdp2b	91	49.624	Maylandia_zebra
ENSCPOG00000006390	TDP2	94	52.235	ENSMZEG00005003950	tdp2b	95	51.685	Maylandia_zebra
ENSCPOG00000006390	TDP2	72	46.304	ENSMZEG00005003980	-	83	46.304	Maylandia_zebra
ENSCPOG00000006390	TDP2	74	54.887	ENSMZEG00005004077	tdp2b	90	54.887	Maylandia_zebra
ENSCPOG00000006390	TDP2	70	52.362	ENSMZEG00005004055	tdp2b	84	52.362	Maylandia_zebra
ENSCPOG00000006390	TDP2	73	53.409	ENSMZEG00005004153	tdp2b	93	53.409	Maylandia_zebra
ENSCPOG00000006390	TDP2	95	69.298	ENSMGAG00000008014	TDP2	91	69.208	Meleagris_gallopavo
ENSCPOG00000006390	TDP2	95	68.328	ENSMAUG00000014451	Tdp2	91	68.529	Mesocricetus_auratus
ENSCPOG00000006390	TDP2	99	87.395	ENSMICG00000000039	TDP2	95	92.115	Microcebus_murinus
ENSCPOG00000006390	TDP2	95	70.381	ENSMOCG00000002823	Tdp2	91	70.588	Microtus_ochrogaster
ENSCPOG00000006390	TDP2	88	66.873	ENSMODG00000011653	TDP2	94	68.710	Monodelphis_domestica
ENSCPOG00000006390	TDP2	75	51.111	ENSMALG00000005368	-	89	51.111	Monopterus_albus
ENSCPOG00000006390	TDP2	96	68.895	MGP_CAROLIEiJ_G0018354	Tdp2	91	69.412	Mus_caroli
ENSCPOG00000006390	TDP2	95	69.501	ENSMUSG00000035958	Tdp2	91	69.706	Mus_musculus
ENSCPOG00000006390	TDP2	97	66.571	MGP_PahariEiJ_G0019417	Tdp2	91	67.353	Mus_pahari
ENSCPOG00000006390	TDP2	99	68.732	MGP_SPRETEiJ_G0019220	Tdp2	91	69.706	Mus_spretus
ENSCPOG00000006390	TDP2	100	82.500	ENSMPUG00000004516	TDP2	100	82.500	Mustela_putorius_furo
ENSCPOG00000006390	TDP2	98	76.136	ENSMLUG00000013506	TDP2	94	77.647	Myotis_lucifugus
ENSCPOG00000006390	TDP2	99	63.784	ENSNGAG00000001375	Tdp2	91	66.568	Nannospalax_galili
ENSCPOG00000006390	TDP2	100	85.912	ENSNLEG00000002447	TDP2	100	86.188	Nomascus_leucogenys
ENSCPOG00000006390	TDP2	97	85.014	ENSOPRG00000016299	TDP2	97	85.294	Ochotona_princeps
ENSCPOG00000006390	TDP2	78	95.683	ENSODEG00000014018	TDP2	95	95.683	Octodon_degus
ENSCPOG00000006390	TDP2	97	86.455	ENSOCUG00000013773	TDP2	94	86.765	Oryctolagus_cuniculus
ENSCPOG00000006390	TDP2	73	49.242	ENSORLG00000001661	-	96	49.242	Oryzias_latipes
ENSCPOG00000006390	TDP2	73	49.242	ENSORLG00020004634	-	96	49.242	Oryzias_latipes_hni
ENSCPOG00000006390	TDP2	74	43.446	ENSORLG00015008190	-	97	43.446	Oryzias_latipes_hsok
ENSCPOG00000006390	TDP2	79	45.763	ENSOMEG00000015899	-	92	50.000	Oryzias_melastigma
ENSCPOG00000006390	TDP2	100	82.597	ENSOGAG00000025303	TDP2	93	84.706	Otolemur_garnettii
ENSCPOG00000006390	TDP2	95	87.097	ENSPPAG00000029023	TDP2	100	85.912	Pan_paniscus
ENSCPOG00000006390	TDP2	98	86.040	ENSPPRG00000015398	TDP2	94	86.471	Panthera_pardus
ENSCPOG00000006390	TDP2	78	88.612	ENSPTIG00000018574	TDP2	96	88.612	Panthera_tigris_altaica
ENSCPOG00000006390	TDP2	95	87.097	ENSPTRG00000017778	TDP2	100	85.912	Pan_troglodytes
ENSCPOG00000006390	TDP2	100	86.034	ENSPANG00000017590	TDP2	100	86.034	Papio_anubis
ENSCPOG00000006390	TDP2	93	54.046	ENSPKIG00000006483	tdp2b	94	54.046	Paramormyrops_kingsleyae
ENSCPOG00000006390	TDP2	78	73.022	ENSPSIG00000004948	TDP2	96	73.022	Pelodiscus_sinensis
ENSCPOG00000006390	TDP2	95	70.674	ENSPEMG00000001788	Tdp2	91	70.882	Peromyscus_maniculatus_bairdii
ENSCPOG00000006390	TDP2	70	47.940	ENSPMAG00000001570	tdp2b	97	47.940	Petromyzon_marinus
ENSCPOG00000006390	TDP2	95	68.915	ENSPCIG00000007316	TDP2	89	69.118	Phascolarctos_cinereus
ENSCPOG00000006390	TDP2	69	50.800	ENSPFOG00000017990	-	90	50.800	Poecilia_formosa
ENSCPOG00000006390	TDP2	73	49.242	ENSPLAG00000019439	-	83	49.242	Poecilia_latipinna
ENSCPOG00000006390	TDP2	75	48.148	ENSPMEG00000010824	-	89	48.148	Poecilia_mexicana
ENSCPOG00000006390	TDP2	95	85.924	ENSPPYG00000016282	TDP2	92	84.807	Pongo_abelii
ENSCPOG00000006390	TDP2	99	88.202	ENSPCOG00000021415	TDP2	98	92.086	Propithecus_coquereli
ENSCPOG00000006390	TDP2	63	44.978	ENSPNYG00000001944	-	72	50.867	Pundamilia_nyererei
ENSCPOG00000006390	TDP2	73	49.643	ENSPNYG00000011504	tdp2b	91	49.643	Pundamilia_nyererei
ENSCPOG00000006390	TDP2	94	51.676	ENSPNYG00000011532	tdp2b	95	51.124	Pundamilia_nyererei
ENSCPOG00000006390	TDP2	70	52.381	ENSPNAG00000022162	tdp2a	64	52.381	Pygocentrus_nattereri
ENSCPOG00000006390	TDP2	96	68.421	ENSRNOG00000018246	Tdp2	92	68.824	Rattus_norvegicus
ENSCPOG00000006390	TDP2	100	86.034	ENSRBIG00000037119	TDP2	100	86.034	Rhinopithecus_bieti
ENSCPOG00000006390	TDP2	100	86.034	ENSRROG00000005025	TDP2	94	89.085	Rhinopithecus_roxellana
ENSCPOG00000006390	TDP2	100	86.188	ENSSBOG00000028734	TDP2	91	92.086	Saimiri_boliviensis_boliviensis
ENSCPOG00000006390	TDP2	98	69.014	ENSSHAG00000002506	TDP2	91	70.088	Sarcophilus_harrisii
ENSCPOG00000006390	TDP2	71	52.362	ENSSFOG00015011322	-	71	52.362	Scleropages_formosus
ENSCPOG00000006390	TDP2	78	79.570	ENSSARG00000013547	TDP2	100	79.570	Sorex_araneus
ENSCPOG00000006390	TDP2	95	65.714	ENSSPUG00000008288	TDP2	95	65.903	Sphenodon_punctatus
ENSCPOG00000006390	TDP2	95	87.390	ENSSSCG00000001092	TDP2	94	87.647	Sus_scrofa
ENSCPOG00000006390	TDP2	73	68.582	ENSTGUG00000009035	TDP2	100	68.582	Taeniopygia_guttata
ENSCPOG00000006390	TDP2	69	54.400	ENSTRUG00000012218	-	87	54.400	Takifugu_rubripes
ENSCPOG00000006390	TDP2	94	53.276	ENSTRUG00000014347	tdp2b	95	53.276	Takifugu_rubripes
ENSCPOG00000006390	TDP2	70	54.023	ENSTNIG00000010260	TDP2	99	54.023	Tetraodon_nigroviridis
ENSCPOG00000006390	TDP2	100	52.011	ENSTNIG00000017792	tdp2b	95	53.541	Tetraodon_nigroviridis
ENSCPOG00000006390	TDP2	95	86.217	ENSTTRG00000016376	TDP2	94	86.471	Tursiops_truncatus
ENSCPOG00000006390	TDP2	100	79.888	ENSUAMG00000025939	TDP2	95	81.765	Ursus_americanus
ENSCPOG00000006390	TDP2	78	88.849	ENSUMAG00000020111	TDP2	93	88.849	Ursus_maritimus
ENSCPOG00000006390	TDP2	93	63.689	ENSXETG00000014826	tdp2	93	63.689	Xenopus_tropicalis
ENSCPOG00000006390	TDP2	69	51.394	ENSXCOG00000010778	-	69	51.394	Xiphophorus_couchianus
ENSCPOG00000006390	TDP2	69	51.394	ENSXMAG00000022252	-	72	51.394	Xiphophorus_maculatus