EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000006564 (Gene tree)
Gene ID: 100728370
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 6104 bases
Position: chrDS562860.1:9316264-9322367
Accession: 100728370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	1	6
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	2	6
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	3	6
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	4	6
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	5	6
ENSCPOP00000005911	zf-C2H2	PF00096.26	7.9e-34	6	6
ENSCPOP00000005911	zf-met	PF12874.7	9.6e-25	1	5
ENSCPOP00000005911	zf-met	PF12874.7	9.6e-25	2	5
ENSCPOP00000005911	zf-met	PF12874.7	9.6e-25	3	5
ENSCPOP00000005911	zf-met	PF12874.7	9.6e-25	4	5
ENSCPOP00000005911	zf-met	PF12874.7	9.6e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000006630	SALL1-201	4973	XM_003477685	ENSCPOP00000005911	1287 (aa)	XP_003477733	H0V828

Gene Model

Click here to download ENSCPOG00000006564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000006564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000006564	SALL1	60	33.962	ENSCPOG00000035563	-	76	40.698
ENSCPOG00000006564	SALL1	52	52.830	ENSCPOG00000008424	ZNF236	79	52.830
ENSCPOG00000006564	SALL1	50	46.429	ENSCPOG00000003954	ZNF317	61	46.429
ENSCPOG00000006564	SALL1	59	41.818	ENSCPOG00000034791	-	72	55.263
ENSCPOG00000006564	SALL1	57	44.643	ENSCPOG00000034004	-	77	44.643
ENSCPOG00000006564	SALL1	99	65.306	ENSCPOG00000008546	SALL3	99	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000006564	SALL1	100	93.683	ENSG00000103449	SALL1	100	94.132	Homo_sapiens
ENSCPOG00000006564	SALL1	99	69.048	ENSAPOG00000022764	sall1a	97	69.048	Acanthochromis_polyacanthus
ENSCPOG00000006564	SALL1	100	91.925	ENSAMEG00000006817	SALL1	98	92.236	Ailuropoda_melanoleuca
ENSCPOG00000006564	SALL1	100	67.405	ENSACIG00000004231	sall1a	98	67.431	Amphilophus_citrinellus
ENSCPOG00000006564	SALL1	99	69.048	ENSAOCG00000002800	sall1a	97	69.048	Amphiprion_ocellaris
ENSCPOG00000006564	SALL1	99	68.726	ENSAPEG00000010179	sall1a	98	68.726	Amphiprion_percula
ENSCPOG00000006564	SALL1	100	68.088	ENSATEG00000003006	sall1a	100	67.849	Anabas_testudineus
ENSCPOG00000006564	SALL1	99	87.403	ENSAPLG00000003356	SALL1	98	87.636	Anas_platyrhynchos
ENSCPOG00000006564	SALL1	99	82.933	ENSACAG00000014399	SALL1	95	82.622	Anolis_carolinensis
ENSCPOG00000006564	SALL1	100	93.750	ENSANAG00000027238	SALL1	98	93.981	Aotus_nancymaae
ENSCPOG00000006564	SALL1	100	67.912	ENSACLG00000017148	sall1a	99	67.797	Astatotilapia_calliptera
ENSCPOG00000006564	SALL1	99	69.489	ENSAMXG00000018599	sall1a	98	68.955	Astyanax_mexicanus
ENSCPOG00000006564	SALL1	99	52.588	ENSAMXG00000017702	sall1b	97	52.197	Astyanax_mexicanus
ENSCPOG00000006564	SALL1	100	91.628	ENSBTAG00000008544	SALL1	98	91.938	Bos_taurus
ENSCPOG00000006564	SALL1	100	93.827	ENSCJAG00000001740	SALL1	98	94.290	Callithrix_jacchus
ENSCPOG00000006564	SALL1	100	91.448	ENSCAFG00000009755	SALL1	98	92.065	Canis_familiaris
ENSCPOG00000006564	SALL1	100	91.448	ENSCAFG00020002842	SALL1	98	92.065	Canis_lupus_dingo
ENSCPOG00000006564	SALL1	100	91.479	ENSCHIG00000026074	SALL1	99	91.402	Capra_hircus
ENSCPOG00000006564	SALL1	100	94.414	ENSTSYG00000029464	SALL1	98	94.414	Carlito_syrichta
ENSCPOG00000006564	SALL1	100	91.499	ENSCCAG00000001639	SALL1	98	91.422	Cebus_capucinus
ENSCPOG00000006564	SALL1	100	94.354	ENSCATG00000004982	SALL1	98	94.741	Cercocebus_atys
ENSCPOG00000006564	SALL1	100	97.591	ENSCLAG00000006380	SALL1	98	97.591	Chinchilla_lanigera
ENSCPOG00000006564	SALL1	100	92.819	ENSCSAG00000005319	SALL1	98	93.436	Chlorocebus_sabaeus
ENSCPOG00000006564	SALL1	65	94.862	ENSCHOG00000000800	-	69	94.862	Choloepus_hoffmanni
ENSCPOG00000006564	SALL1	100	87.413	ENSCPBG00000015924	SALL1	99	87.737	Chrysemys_picta_bellii
ENSCPOG00000006564	SALL1	100	94.272	ENSCANG00000036664	SALL1	100	94.840	Colobus_angolensis_palliatus
ENSCPOG00000006564	SALL1	100	91.879	ENSCGRG00001023314	-	98	92.034	Cricetulus_griseus_chok1gshd
ENSCPOG00000006564	SALL1	100	91.879	ENSCGRG00000009496	Sall1	100	92.034	Cricetulus_griseus_crigri
ENSCPOG00000006564	SALL1	99	66.489	ENSCSEG00000009349	sall1a	97	66.972	Cynoglossus_semilaevis
ENSCPOG00000006564	SALL1	90	66.953	ENSCVAG00000020513	sall1a	97	66.981	Cyprinodon_variegatus
ENSCPOG00000006564	SALL1	99	47.381	ENSDARG00000075891	sall1b	98	47.227	Danio_rerio
ENSCPOG00000006564	SALL1	100	68.533	ENSDARG00000074319	sall1a	99	68.640	Danio_rerio
ENSCPOG00000006564	SALL1	100	91.699	ENSDNOG00000016413	SALL1	98	92.475	Dasypus_novemcinctus
ENSCPOG00000006564	SALL1	100	92.852	ENSETEG00000015150	SALL1	100	92.852	Echinops_telfairi
ENSCPOG00000006564	SALL1	88	65.385	ENSEBUG00000011732	SALL1	93	65.385	Eptatretus_burgeri
ENSCPOG00000006564	SALL1	71	42.239	ENSEBUG00000008798	SALL1	79	41.466	Eptatretus_burgeri
ENSCPOG00000006564	SALL1	100	94.561	ENSEASG00005014602	SALL1	98	94.561	Equus_asinus_asinus
ENSCPOG00000006564	SALL1	90	92.347	ENSECAG00000011334	SALL1	98	92.347	Equus_caballus
ENSCPOG00000006564	SALL1	100	91.247	ENSEEUG00000002014	SALL1	100	91.247	Erinaceus_europaeus
ENSCPOG00000006564	SALL1	99	66.279	ENSELUG00000006159	sall1a	99	66.205	Esox_lucius
ENSCPOG00000006564	SALL1	99	52.473	ENSELUG00000017774	-	98	52.241	Esox_lucius
ENSCPOG00000006564	SALL1	100	91.170	ENSFCAG00000024654	SALL1	100	91.311	Felis_catus
ENSCPOG00000006564	SALL1	99	86.625	ENSFALG00000000074	SALL1	98	86.625	Ficedula_albicollis
ENSCPOG00000006564	SALL1	75	63.462	ENSFHEG00000008424	-	94	63.462	Fundulus_heteroclitus
ENSCPOG00000006564	SALL1	99	67.948	ENSFHEG00000012579	sall1a	97	67.972	Fundulus_heteroclitus
ENSCPOG00000006564	SALL1	99	41.746	ENSGMOG00000013383	-	90	63.462	Gadus_morhua
ENSCPOG00000006564	SALL1	99	66.743	ENSGMOG00000006103	sall1a	98	66.769	Gadus_morhua
ENSCPOG00000006564	SALL1	99	87.092	ENSGALG00000039238	SALL1	98	87.092	Gallus_gallus
ENSCPOG00000006564	SALL1	99	68.409	ENSGAFG00000009964	sall1a	97	68.433	Gambusia_affinis
ENSCPOG00000006564	SALL1	100	67.124	ENSGACG00000016702	sall1a	98	67.048	Gasterosteus_aculeatus
ENSCPOG00000006564	SALL1	99	87.237	ENSGAGG00000013979	SALL1	99	87.407	Gopherus_agassizii
ENSCPOG00000006564	SALL1	100	93.837	ENSGGOG00000000663	SALL1	98	94.299	Gorilla_gorilla
ENSCPOG00000006564	SALL1	100	67.912	ENSHBUG00000022005	sall1a	99	67.797	Haplochromis_burtoni
ENSCPOG00000006564	SALL1	100	96.737	ENSHGLG00000004288	-	98	96.737	Heterocephalus_glaber_female
ENSCPOG00000006564	SALL1	100	96.737	ENSHGLG00100017496	SALL1	98	96.737	Heterocephalus_glaber_male
ENSCPOG00000006564	SALL1	99	67.052	ENSHCOG00000000974	sall1a	97	66.718	Hippocampus_comes
ENSCPOG00000006564	SALL1	99	49.807	ENSIPUG00000022928	sall1b	97	49.387	Ictalurus_punctatus
ENSCPOG00000006564	SALL1	99	69.472	ENSIPUG00000016265	SALL1	98	69.013	Ictalurus_punctatus
ENSCPOG00000006564	SALL1	100	94.647	ENSSTOG00000020885	SALL1	98	94.647	Ictidomys_tridecemlineatus
ENSCPOG00000006564	SALL1	100	67.708	ENSKMAG00000016681	sall1a	98	67.735	Kryptolebias_marmoratus
ENSCPOG00000006564	SALL1	99	67.127	ENSLBEG00000012207	sall1a	95	67.076	Labrus_bergylta
ENSCPOG00000006564	SALL1	100	78.166	ENSLACG00000003556	SALL1	98	78.460	Latimeria_chalumnae
ENSCPOG00000006564	SALL1	99	40.442	ENSLACG00000014018	-	93	40.861	Latimeria_chalumnae
ENSCPOG00000006564	SALL1	99	74.040	ENSLOCG00000007283	sall1b	98	73.837	Lepisosteus_oculatus
ENSCPOG00000006564	SALL1	100	93.162	ENSLAFG00000015251	SALL1	99	93.162	Loxodonta_africana
ENSCPOG00000006564	SALL1	100	93.986	ENSMFAG00000003298	SALL1	98	94.449	Macaca_fascicularis
ENSCPOG00000006564	SALL1	94	93.964	ENSMMUG00000017200	SALL1	100	94.454	Macaca_mulatta
ENSCPOG00000006564	SALL1	94	93.888	ENSMNEG00000034770	SALL1	100	94.295	Macaca_nemestrina
ENSCPOG00000006564	SALL1	100	94.427	ENSMLEG00000036406	SALL1	100	94.840	Mandrillus_leucophaeus
ENSCPOG00000006564	SALL1	99	68.473	ENSMAMG00000004164	sall1a	100	67.814	Mastacembelus_armatus
ENSCPOG00000006564	SALL1	100	67.912	ENSMZEG00005006479	sall1a	99	67.797	Maylandia_zebra
ENSCPOG00000006564	SALL1	99	87.092	ENSMGAG00000004704	SALL1	99	87.092	Meleagris_gallopavo
ENSCPOG00000006564	SALL1	100	91.311	ENSMAUG00000019093	Sall1	98	91.621	Mesocricetus_auratus
ENSCPOG00000006564	SALL1	100	92.552	ENSMICG00000036486	SALL1	98	92.552	Microcebus_murinus
ENSCPOG00000006564	SALL1	100	68.015	ENSMMOG00000016400	sall1a	98	67.991	Mola_mola
ENSCPOG00000006564	SALL1	100	89.628	ENSMODG00000013114	SALL1	98	90.521	Monodelphis_domestica
ENSCPOG00000006564	SALL1	99	68.894	ENSMALG00000013400	sall1a	97	68.793	Monopterus_albus
ENSCPOG00000006564	SALL1	100	90.979	MGP_CAROLIEiJ_G0031362	Sall1	98	91.288	Mus_caroli
ENSCPOG00000006564	SALL1	100	90.755	ENSMUSG00000031665	Sall1	98	90.986	Mus_musculus
ENSCPOG00000006564	SALL1	100	90.300	MGP_PahariEiJ_G0022961	Sall1	98	90.608	Mus_pahari
ENSCPOG00000006564	SALL1	100	90.832	MGP_SPRETEiJ_G0032480	Sall1	98	91.063	Mus_spretus
ENSCPOG00000006564	SALL1	100	90.310	ENSMPUG00000003265	SALL1	96	90.388	Mustela_putorius_furo
ENSCPOG00000006564	SALL1	99	83.873	ENSMLUG00000015541	SALL1	99	85.494	Myotis_lucifugus
ENSCPOG00000006564	SALL1	100	67.634	ENSNBRG00000009307	sall1a	99	67.502	Neolamprologus_brichardi
ENSCPOG00000006564	SALL1	95	98.333	ENSNLEG00000001008	SALL1	99	98.333	Nomascus_leucogenys
ENSCPOG00000006564	SALL1	100	89.588	ENSMEUG00000012206	SALL1	98	89.588	Notamacropus_eugenii
ENSCPOG00000006564	SALL1	90	93.133	ENSOPRG00000005645	SALL1	74	93.143	Ochotona_princeps
ENSCPOG00000006564	SALL1	100	97.436	ENSODEG00000003685	SALL1	98	97.436	Octodon_degus
ENSCPOG00000006564	SALL1	100	68.015	ENSONIG00000002831	sall1a	98	68.043	Oreochromis_niloticus
ENSCPOG00000006564	SALL1	85	88.679	ENSOANG00000013399	SALL1	96	88.679	Ornithorhynchus_anatinus
ENSCPOG00000006564	SALL1	99	67.565	ENSORLG00000013827	sall1a	97	69.718	Oryzias_latipes
ENSCPOG00000006564	SALL1	99	67.488	ENSORLG00020020570	sall1a	97	67.565	Oryzias_latipes_hni
ENSCPOG00000006564	SALL1	99	67.565	ENSORLG00015018830	sall1a	97	69.133	Oryzias_latipes_hsok
ENSCPOG00000006564	SALL1	99	67.458	ENSOMEG00000016043	sall1a	99	67.393	Oryzias_melastigma
ENSCPOG00000006564	SALL1	100	93.034	ENSOGAG00000027316	SALL1	98	93.421	Otolemur_garnettii
ENSCPOG00000006564	SALL1	100	85.978	ENSOARG00000017583	SALL1	98	86.210	Ovis_aries
ENSCPOG00000006564	SALL1	99	71.329	ENSPPAG00000035136	-	99	72.028	Pan_paniscus
ENSCPOG00000006564	SALL1	100	93.837	ENSPPAG00000035657	SALL1	100	94.376	Pan_paniscus
ENSCPOG00000006564	SALL1	100	91.015	ENSPPRG00000023283	SALL1	100	91.148	Panthera_pardus
ENSCPOG00000006564	SALL1	84	95.429	ENSPTIG00000013539	-	95	95.429	Panthera_tigris_altaica
ENSCPOG00000006564	SALL1	100	93.923	ENSPTRG00000008108	SALL1	98	94.440	Pan_troglodytes
ENSCPOG00000006564	SALL1	98	71.655	ENSPTRG00000045256	-	98	72.411	Pan_troglodytes
ENSCPOG00000006564	SALL1	100	94.505	ENSPANG00000024176	SALL1	98	94.892	Papio_anubis
ENSCPOG00000006564	SALL1	99	65.972	ENSPKIG00000022251	sall1a	97	65.920	Paramormyrops_kingsleyae
ENSCPOG00000006564	SALL1	99	65.397	ENSPKIG00000005383	-	97	65.316	Paramormyrops_kingsleyae
ENSCPOG00000006564	SALL1	99	86.703	ENSPSIG00000008582	SALL1	98	86.858	Pelodiscus_sinensis
ENSCPOG00000006564	SALL1	99	66.641	ENSPMGG00000021788	sall1a	97	66.514	Periophthalmus_magnuspinnatus
ENSCPOG00000006564	SALL1	98	52.600	ENSPMAG00000008148	sall1b	97	52.556	Petromyzon_marinus
ENSCPOG00000006564	SALL1	100	89.977	ENSPCIG00000017840	SALL1	98	89.977	Phascolarctos_cinereus
ENSCPOG00000006564	SALL1	99	67.835	ENSPFOG00000015799	sall1a	96	67.985	Poecilia_formosa
ENSCPOG00000006564	SALL1	99	67.912	ENSPLAG00000022539	sall1a	98	68.061	Poecilia_latipinna
ENSCPOG00000006564	SALL1	99	67.988	ENSPMEG00000020894	sall1a	98	68.012	Poecilia_mexicana
ENSCPOG00000006564	SALL1	99	67.991	ENSPREG00000006802	sall1a	99	68.015	Poecilia_reticulata
ENSCPOG00000006564	SALL1	90	93.918	ENSPPYG00000007345	SALL1	93	94.179	Pongo_abelii
ENSCPOG00000006564	SALL1	84	91.847	ENSPCAG00000008162	SALL1	91	91.945	Procavia_capensis
ENSCPOG00000006564	SALL1	100	93.173	ENSPCOG00000028192	SALL1	98	93.328	Propithecus_coquereli
ENSCPOG00000006564	SALL1	82	91.589	ENSPVAG00000015374	SALL1	100	91.939	Pteropus_vampyrus
ENSCPOG00000006564	SALL1	100	67.988	ENSPNYG00000010865	sall1a	99	67.877	Pundamilia_nyererei
ENSCPOG00000006564	SALL1	99	67.328	ENSPNAG00000023644	sall1a	98	66.590	Pygocentrus_nattereri
ENSCPOG00000006564	SALL1	99	54.299	ENSPNAG00000007442	sall1b	97	53.811	Pygocentrus_nattereri
ENSCPOG00000006564	SALL1	98	63.462	ENSPNAG00000028248	-	65	65.306	Pygocentrus_nattereri
ENSCPOG00000006564	SALL1	100	90.635	ENSRNOG00000013907	Sall1	98	90.944	Rattus_norvegicus
ENSCPOG00000006564	SALL1	94	93.709	ENSRBIG00000015707	SALL1	100	94.444	Rhinopithecus_bieti
ENSCPOG00000006564	SALL1	99	93.972	ENSRROG00000035777	SALL1	100	94.367	Rhinopithecus_roxellana
ENSCPOG00000006564	SALL1	100	93.524	ENSSBOG00000032186	SALL1	98	93.909	Saimiri_boliviensis_boliviensis
ENSCPOG00000006564	SALL1	100	89.070	ENSSHAG00000009477	SALL1	98	89.070	Sarcophilus_harrisii
ENSCPOG00000006564	SALL1	99	67.285	ENSSFOG00015020020	sall1a	97	67.157	Scleropages_formosus
ENSCPOG00000006564	SALL1	100	67.483	ENSSFOG00015001590	sall1a	99	67.534	Scleropages_formosus
ENSCPOG00000006564	SALL1	100	68.317	ENSSMAG00000009160	sall1a	98	68.445	Scophthalmus_maximus
ENSCPOG00000006564	SALL1	100	68.674	ENSSDUG00000006507	sall1a	100	68.710	Seriola_dumerili
ENSCPOG00000006564	SALL1	89	59.184	ENSSDUG00000000748	sall1b	95	59.184	Seriola_dumerili
ENSCPOG00000006564	SALL1	100	68.750	ENSSLDG00000017721	sall1a	98	68.879	Seriola_lalandi_dorsalis
ENSCPOG00000006564	SALL1	55	72.340	ENSSLDG00000014465	-	87	72.340	Seriola_lalandi_dorsalis
ENSCPOG00000006564	SALL1	100	91.634	ENSSARG00000000661	SALL1	100	91.944	Sorex_araneus
ENSCPOG00000006564	SALL1	99	86.703	ENSSPUG00000000156	SALL1	98	86.703	Sphenodon_punctatus
ENSCPOG00000006564	SALL1	99	69.148	ENSSPAG00000021615	sall1a	97	69.148	Stegastes_partitus
ENSCPOG00000006564	SALL1	100	91.077	ENSSSCG00000002836	SALL1	98	91.391	Sus_scrofa
ENSCPOG00000006564	SALL1	99	86.703	ENSTGUG00000007514	SALL1	98	86.703	Taeniopygia_guttata
ENSCPOG00000006564	SALL1	91	65.750	ENSTRUG00000008950	sall1a	98	66.112	Takifugu_rubripes
ENSCPOG00000006564	SALL1	91	65.340	ENSTNIG00000004257	sall1a	97	65.721	Tetraodon_nigroviridis
ENSCPOG00000006564	SALL1	78	96.575	ENSTBEG00000002119	-	53	96.575	Tupaia_belangeri
ENSCPOG00000006564	SALL1	90	91.638	ENSUAMG00000023379	-	90	91.638	Ursus_americanus
ENSCPOG00000006564	SALL1	90	90.484	ENSVVUG00000019383	-	97	90.657	Vulpes_vulpes
ENSCPOG00000006564	SALL1	82	61.538	ENSXETG00000017176	sall2	75	61.538	Xenopus_tropicalis
ENSCPOG00000006564	SALL1	99	78.278	ENSXETG00000018417	sall1	96	78.278	Xenopus_tropicalis
ENSCPOG00000006564	SALL1	99	68.064	ENSXMAG00000016273	sall1a	99	68.116	Xiphophorus_maculatus