EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000006566 (Gene tree)
Gene ID: 100723526
Gene Symbol: KPNB1
Alias: IMB1|IPO1|IPOB|Impnb|MGC2155|MGC2156|MGC2157|NTF97
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 29451 bases
Position: chrDS562908.1:9366905-9396355
Accession: 100723526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026151	IBN_N	PF03810.19	6.2e-12	1	1
ENSCPOP00000005913	IBN_N	PF03810.19	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000037844	KPNB1-201	6390	XM_003467064	ENSCPOP00000026151	876 (aa)	XP_003467112	A0A286XL74
ENSCPOT00000006632	KPNB1-202	2622	-	ENSCPOP00000005913	873 (aa)	-	H0V830

Gene Model

Click here to download ENSCPOG00000006566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000006566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000006566	KPNB1	100	99.087	ENSG00000108424	KPNB1	100	100.000	Homo_sapiens
ENSCPOG00000006566	KPNB1	100	93.265	ENSAPOG00000020572	kpnb1	100	93.265	Acanthochromis_polyacanthus
ENSCPOG00000006566	KPNB1	96	99.052	ENSAMEG00000004613	KPNB1	100	99.052	Ailuropoda_melanoleuca
ENSCPOG00000006566	KPNB1	98	93.107	ENSACIG00000023130	kpnb1	99	93.107	Amphilophus_citrinellus
ENSCPOG00000006566	KPNB1	100	93.265	ENSAOCG00000007048	kpnb1	100	93.265	Amphiprion_ocellaris
ENSCPOG00000006566	KPNB1	100	93.265	ENSAPEG00000008270	kpnb1	100	93.265	Amphiprion_percula
ENSCPOG00000006566	KPNB1	100	92.694	ENSATEG00000015139	kpnb1	100	92.694	Anabas_testudineus
ENSCPOG00000006566	KPNB1	99	94.863	ENSAPLG00000010177	KPNB1	100	94.863	Anas_platyrhynchos
ENSCPOG00000006566	KPNB1	100	97.260	ENSACAG00000007097	KPNB1	100	97.260	Anolis_carolinensis
ENSCPOG00000006566	KPNB1	100	96.347	ENSANAG00000024932	-	99	96.347	Aotus_nancymaae
ENSCPOG00000006566	KPNB1	100	92.922	ENSACLG00000015070	kpnb1	100	92.922	Astatotilapia_calliptera
ENSCPOG00000006566	KPNB1	100	93.265	ENSAMXG00000041903	kpnb1	100	93.265	Astyanax_mexicanus
ENSCPOG00000006566	KPNB1	100	99.315	ENSBTAG00000006586	KPNB1	100	99.315	Bos_taurus
ENSCPOG00000006566	KPNB1	99	48.186	WBGene00002075	imb-1	98	48.077	Caenorhabditis_elegans
ENSCPOG00000006566	KPNB1	100	98.973	ENSCJAG00000007834	KPNB1	100	98.973	Callithrix_jacchus
ENSCPOG00000006566	KPNB1	100	99.315	ENSCAFG00000016678	KPNB1	100	99.315	Canis_familiaris
ENSCPOG00000006566	KPNB1	100	99.315	ENSCAFG00020023205	KPNB1	100	99.315	Canis_lupus_dingo
ENSCPOG00000006566	KPNB1	100	99.315	ENSCHIG00000014896	KPNB1	100	99.315	Capra_hircus
ENSCPOG00000006566	KPNB1	100	97.032	ENSTSYG00000014472	KPNB1	99	97.032	Carlito_syrichta
ENSCPOG00000006566	KPNB1	96	100.000	ENSCAPG00000014185	KPNB1	100	100.000	Cavia_aperea
ENSCPOG00000006566	KPNB1	99	79.720	ENSCCAG00000018551	-	100	79.720	Cebus_capucinus
ENSCPOG00000006566	KPNB1	100	92.141	ENSCCAG00000029263	-	99	92.141	Cebus_capucinus
ENSCPOG00000006566	KPNB1	100	99.087	ENSCATG00000037124	KPNB1	100	99.087	Cercocebus_atys
ENSCPOG00000006566	KPNB1	100	99.886	ENSCLAG00000017091	KPNB1	100	99.886	Chinchilla_lanigera
ENSCPOG00000006566	KPNB1	100	99.087	ENSCSAG00000002605	KPNB1	100	99.087	Chlorocebus_sabaeus
ENSCPOG00000006566	KPNB1	73	100.000	ENSCHOG00000010604	KPNB1	73	100.000	Choloepus_hoffmanni
ENSCPOG00000006566	KPNB1	99	98.262	ENSCPBG00000027423	KPNB1	94	98.262	Chrysemys_picta_bellii
ENSCPOG00000006566	KPNB1	99	64.538	ENSCING00000004639	-	99	64.538	Ciona_intestinalis
ENSCPOG00000006566	KPNB1	100	62.387	ENSCSAVG00000008624	-	100	62.387	Ciona_savignyi
ENSCPOG00000006566	KPNB1	96	96.802	ENSCANG00000013489	KPNB1	100	96.802	Colobus_angolensis_palliatus
ENSCPOG00000006566	KPNB1	100	99.429	ENSCGRG00001016042	Kpnb1	100	99.429	Cricetulus_griseus_chok1gshd
ENSCPOG00000006566	KPNB1	96	99.407	ENSCGRG00000013910	Kpnb1	100	99.407	Cricetulus_griseus_crigri
ENSCPOG00000006566	KPNB1	97	90.258	ENSCSEG00000007991	kpnb1	100	90.258	Cynoglossus_semilaevis
ENSCPOG00000006566	KPNB1	100	92.466	ENSDARG00000104889	kpnb1	100	92.466	Danio_rerio
ENSCPOG00000006566	KPNB1	99	61.644	FBgn0262743	Fs(2)Ket	99	61.644	Drosophila_melanogaster
ENSCPOG00000006566	KPNB1	98	82.251	ENSEBUG00000013869	kpnb1	98	82.251	Eptatretus_burgeri
ENSCPOG00000006566	KPNB1	100	99.315	ENSEASG00005000805	KPNB1	100	99.315	Equus_asinus_asinus
ENSCPOG00000006566	KPNB1	100	99.315	ENSECAG00000014560	KPNB1	100	99.315	Equus_caballus
ENSCPOG00000006566	KPNB1	85	98.995	ENSEEUG00000005046	KPNB1	88	98.995	Erinaceus_europaeus
ENSCPOG00000006566	KPNB1	100	93.151	ENSELUG00000015847	kpnb1	100	93.151	Esox_lucius
ENSCPOG00000006566	KPNB1	100	99.315	ENSFCAG00000023994	KPNB1	100	99.315	Felis_catus
ENSCPOG00000006566	KPNB1	96	99.644	ENSFDAG00000019923	KPNB1	100	99.644	Fukomys_damarensis
ENSCPOG00000006566	KPNB1	100	92.580	ENSFHEG00000020199	kpnb1	100	92.580	Fundulus_heteroclitus
ENSCPOG00000006566	KPNB1	100	88.356	ENSGMOG00000011607	kpnb1	99	88.356	Gadus_morhua
ENSCPOG00000006566	KPNB1	100	97.603	ENSGALG00000036962	KPNB1	100	97.603	Gallus_gallus
ENSCPOG00000006566	KPNB1	100	92.352	ENSGAFG00000000783	kpnb1	100	92.352	Gambusia_affinis
ENSCPOG00000006566	KPNB1	100	88.814	ENSGACG00000014765	kpnb1	100	88.814	Gasterosteus_aculeatus
ENSCPOG00000006566	KPNB1	96	97.979	ENSGAGG00000023737	KPNB1	92	97.979	Gopherus_agassizii
ENSCPOG00000006566	KPNB1	100	99.087	ENSGGOG00000008089	KPNB1	100	99.087	Gorilla_gorilla
ENSCPOG00000006566	KPNB1	100	92.922	ENSHBUG00000016826	kpnb1	100	92.922	Haplochromis_burtoni
ENSCPOG00000006566	KPNB1	100	99.658	ENSHGLG00000014138	KPNB1	100	99.658	Heterocephalus_glaber_female
ENSCPOG00000006566	KPNB1	98	98.026	ENSHGLG00100006572	KPNB1	100	99.644	Heterocephalus_glaber_male
ENSCPOG00000006566	KPNB1	100	91.210	ENSHCOG00000002084	kpnb1	100	91.210	Hippocampus_comes
ENSCPOG00000006566	KPNB1	99	88.644	ENSIPUG00000012402	kpnb1	95	88.644	Ictalurus_punctatus
ENSCPOG00000006566	KPNB1	100	99.543	ENSSTOG00000007896	KPNB1	100	99.543	Ictidomys_tridecemlineatus
ENSCPOG00000006566	KPNB1	100	99.201	ENSJJAG00000010909	Kpnb1	100	99.201	Jaculus_jaculus
ENSCPOG00000006566	KPNB1	100	92.237	ENSKMAG00000001547	kpnb1	100	92.237	Kryptolebias_marmoratus
ENSCPOG00000006566	KPNB1	99	92.734	ENSLBEG00000025794	kpnb1	99	91.228	Labrus_bergylta
ENSCPOG00000006566	KPNB1	88	94.423	ENSLACG00000017620	KPNB1	99	94.423	Latimeria_chalumnae
ENSCPOG00000006566	KPNB1	100	93.836	ENSLOCG00000013753	kpnb1	100	93.836	Lepisosteus_oculatus
ENSCPOG00000006566	KPNB1	100	93.836	ENSLAFG00000001328	KPNB1	100	93.836	Loxodonta_africana
ENSCPOG00000006566	KPNB1	99	96.449	ENSMFAG00000030197	KPNB1	100	99.051	Macaca_fascicularis
ENSCPOG00000006566	KPNB1	99	97.371	ENSMMUG00000019760	KPNB1	99	97.371	Macaca_mulatta
ENSCPOG00000006566	KPNB1	100	99.087	ENSMNEG00000040927	KPNB1	100	99.087	Macaca_nemestrina
ENSCPOG00000006566	KPNB1	96	99.051	ENSMLEG00000038185	KPNB1	96	99.051	Mandrillus_leucophaeus
ENSCPOG00000006566	KPNB1	100	93.265	ENSMAMG00000011036	kpnb1	100	93.265	Mastacembelus_armatus
ENSCPOG00000006566	KPNB1	100	92.922	ENSMZEG00005004564	kpnb1	100	92.922	Maylandia_zebra
ENSCPOG00000006566	KPNB1	55	97.308	ENSMGAG00000002770	-	100	97.308	Meleagris_gallopavo
ENSCPOG00000006566	KPNB1	100	99.429	ENSMAUG00000006211	Kpnb1	100	99.429	Mesocricetus_auratus
ENSCPOG00000006566	KPNB1	100	99.315	ENSMICG00000012059	KPNB1	84	99.315	Microcebus_murinus
ENSCPOG00000006566	KPNB1	100	99.429	ENSMOCG00000003683	Kpnb1	100	99.429	Microtus_ochrogaster
ENSCPOG00000006566	KPNB1	100	98.516	ENSMODG00000012505	KPNB1	100	98.516	Monodelphis_domestica
ENSCPOG00000006566	KPNB1	100	93.379	ENSMALG00000000863	kpnb1	100	93.379	Monopterus_albus
ENSCPOG00000006566	KPNB1	94	99.270	MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	Mus_caroli
ENSCPOG00000006566	KPNB1	100	99.315	ENSMUSG00000001440	Kpnb1	100	99.315	Mus_musculus
ENSCPOG00000006566	KPNB1	100	98.290	ENSMPUG00000015220	KPNB1	100	98.290	Mustela_putorius_furo
ENSCPOG00000006566	KPNB1	100	93.743	ENSMLUG00000014522	KPNB1	100	93.743	Myotis_lucifugus
ENSCPOG00000006566	KPNB1	96	99.407	ENSNGAG00000017610	Kpnb1	100	99.407	Nannospalax_galili
ENSCPOG00000006566	KPNB1	100	92.922	ENSNBRG00000019305	kpnb1	100	92.922	Neolamprologus_brichardi
ENSCPOG00000006566	KPNB1	100	99.087	ENSNLEG00000001446	KPNB1	100	99.087	Nomascus_leucogenys
ENSCPOG00000006566	KPNB1	100	92.922	ENSMEUG00000014284	KPNB1	100	92.922	Notamacropus_eugenii
ENSCPOG00000006566	KPNB1	100	99.658	ENSODEG00000017287	KPNB1	100	99.658	Octodon_degus
ENSCPOG00000006566	KPNB1	100	93.037	ENSONIG00000009269	kpnb1	100	93.037	Oreochromis_niloticus
ENSCPOG00000006566	KPNB1	100	99.087	ENSOCUG00000015425	KPNB1	100	99.087	Oryctolagus_cuniculus
ENSCPOG00000006566	KPNB1	100	92.922	ENSORLG00000019936	kpnb1	100	92.922	Oryzias_latipes
ENSCPOG00000006566	KPNB1	100	92.922	ENSORLG00020021181	kpnb1	100	92.922	Oryzias_latipes_hni
ENSCPOG00000006566	KPNB1	100	92.808	ENSORLG00015012177	kpnb1	100	92.808	Oryzias_latipes_hsok
ENSCPOG00000006566	KPNB1	100	93.037	ENSOMEG00000021022	kpnb1	100	93.037	Oryzias_melastigma
ENSCPOG00000006566	KPNB1	100	99.201	ENSOGAG00000006153	KPNB1	100	99.201	Otolemur_garnettii
ENSCPOG00000006566	KPNB1	97	98.244	ENSOARG00000008469	KPNB1	99	98.244	Ovis_aries
ENSCPOG00000006566	KPNB1	100	99.087	ENSPPAG00000028842	KPNB1	100	99.087	Pan_paniscus
ENSCPOG00000006566	KPNB1	99	96.670	ENSPPRG00000022879	KPNB1	99	96.670	Panthera_pardus
ENSCPOG00000006566	KPNB1	99	96.670	ENSPTIG00000006870	KPNB1	99	96.670	Panthera_tigris_altaica
ENSCPOG00000006566	KPNB1	100	99.087	ENSPTRG00000009333	KPNB1	100	99.087	Pan_troglodytes
ENSCPOG00000006566	KPNB1	100	99.087	ENSPANG00000022099	KPNB1	100	99.087	Papio_anubis
ENSCPOG00000006566	KPNB1	100	93.493	ENSPKIG00000017563	kpnb1	100	93.493	Paramormyrops_kingsleyae
ENSCPOG00000006566	KPNB1	96	98.458	ENSPSIG00000009775	KPNB1	100	98.458	Pelodiscus_sinensis
ENSCPOG00000006566	KPNB1	100	88.483	ENSPMGG00000001041	kpnb1	93	88.483	Periophthalmus_magnuspinnatus
ENSCPOG00000006566	KPNB1	100	99.429	ENSPEMG00000017783	Kpnb1	100	99.429	Peromyscus_maniculatus_bairdii
ENSCPOG00000006566	KPNB1	99	86.446	ENSPMAG00000007117	kpnb1	99	86.446	Petromyzon_marinus
ENSCPOG00000006566	KPNB1	100	98.516	ENSPCIG00000001034	KPNB1	100	98.516	Phascolarctos_cinereus
ENSCPOG00000006566	KPNB1	100	92.352	ENSPFOG00000009014	kpnb1	100	92.352	Poecilia_formosa
ENSCPOG00000006566	KPNB1	100	92.352	ENSPLAG00000010922	kpnb1	100	92.352	Poecilia_latipinna
ENSCPOG00000006566	KPNB1	100	92.352	ENSPREG00000012268	kpnb1	100	92.352	Poecilia_reticulata
ENSCPOG00000006566	KPNB1	100	98.630	ENSPPYG00000025935	KPNB1	100	98.630	Pongo_abelii
ENSCPOG00000006566	KPNB1	75	82.333	ENSPCAG00000002526	KPNB1	78	82.333	Procavia_capensis
ENSCPOG00000006566	KPNB1	100	99.315	ENSPCOG00000026259	KPNB1	100	99.315	Propithecus_coquereli
ENSCPOG00000006566	KPNB1	100	98.858	ENSPVAG00000004910	KPNB1	100	98.858	Pteropus_vampyrus
ENSCPOG00000006566	KPNB1	100	88.755	ENSPNYG00000017703	kpnb1	96	93.495	Pundamilia_nyererei
ENSCPOG00000006566	KPNB1	99	84.994	ENSPNAG00000024047	kpnb1	98	84.994	Pygocentrus_nattereri
ENSCPOG00000006566	KPNB1	100	99.315	ENSRNOG00000009275	Kpnb1	100	99.315	Rattus_norvegicus
ENSCPOG00000006566	KPNB1	100	98.858	ENSRBIG00000002254	KPNB1	99	98.858	Rhinopithecus_bieti
ENSCPOG00000006566	KPNB1	99	98.614	ENSRROG00000030419	KPNB1	99	98.614	Rhinopithecus_roxellana
ENSCPOG00000006566	KPNB1	99	33.788	YLR347C	KAP95	99	33.675	Saccharomyces_cerevisiae
ENSCPOG00000006566	KPNB1	100	99.087	ENSSBOG00000030025	KPNB1	94	99.087	Saimiri_boliviensis_boliviensis
ENSCPOG00000006566	KPNB1	96	98.229	ENSSHAG00000018214	KPNB1	100	98.229	Sarcophilus_harrisii
ENSCPOG00000006566	KPNB1	100	93.950	ENSSFOG00015020000	kpnb1	100	93.950	Scleropages_formosus
ENSCPOG00000006566	KPNB1	100	93.493	ENSSDUG00000016218	kpnb1	100	93.493	Seriola_dumerili
ENSCPOG00000006566	KPNB1	98	93.473	ENSSLDG00000021549	kpnb1	97	93.473	Seriola_lalandi_dorsalis
ENSCPOG00000006566	KPNB1	100	97.603	ENSSPUG00000017799	KPNB1	100	97.603	Sphenodon_punctatus
ENSCPOG00000006566	KPNB1	100	93.265	ENSSPAG00000019346	kpnb1	100	93.265	Stegastes_partitus
ENSCPOG00000006566	KPNB1	100	99.315	ENSSSCG00000017514	KPNB1	100	99.315	Sus_scrofa
ENSCPOG00000006566	KPNB1	96	93.001	ENSTGUG00000003387	KPNB1	100	93.001	Taeniopygia_guttata
ENSCPOG00000006566	KPNB1	100	90.639	ENSTRUG00000000542	kpnb1	100	90.639	Takifugu_rubripes
ENSCPOG00000006566	KPNB1	100	90.639	ENSTNIG00000006494	kpnb1	100	90.639	Tetraodon_nigroviridis
ENSCPOG00000006566	KPNB1	96	99.170	ENSTTRG00000004682	KPNB1	100	99.170	Tursiops_truncatus
ENSCPOG00000006566	KPNB1	100	99.315	ENSUAMG00000025344	KPNB1	99	99.315	Ursus_americanus
ENSCPOG00000006566	KPNB1	98	98.023	ENSUMAG00000016471	KPNB1	98	98.023	Ursus_maritimus
ENSCPOG00000006566	KPNB1	92	98.835	ENSVPAG00000003675	KPNB1	92	98.835	Vicugna_pacos
ENSCPOG00000006566	KPNB1	100	99.315	ENSVVUG00000003085	KPNB1	100	99.315	Vulpes_vulpes
ENSCPOG00000006566	KPNB1	100	94.977	ENSXETG00000014717	kpnb1	100	94.977	Xenopus_tropicalis
ENSCPOG00000006566	KPNB1	100	92.466	ENSXMAG00000018792	kpnb1	100	92.466	Xiphophorus_maculatus